Details from NCBI annotation

Gene Symbol Irf5
Gene Name interferon regulatory factor 5, transcript variant X1
Entrez Gene ID 101713015

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IRF5 ENSCPOG00000000246 (Guinea pig)

Gene Details

interferon regulatory factor 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000217, Guinea pig)

Protein Percentage 89.54%
CDS Percentage 89.6%
Ka/Ks Ratio 0.19876 (Ka = 0.061, Ks = 0.3071)

IRF5 ENSG00000128604 (Human)

Gene Details

interferon regulatory factor 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000349770, Human)

Protein Percentage 86.29%
CDS Percentage 87.1%
Ka/Ks Ratio 0.19013 (Ka = 0.0786, Ks = 0.4135)

Irf5 ENSMUSG00000029771 (Mouse)

Gene Details

interferon regulatory factor 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127021, Mouse)

Protein Percentage 87.04%
CDS Percentage 86.1%
Ka/Ks Ratio 0.16148 (Ka = 0.0767, Ks = 0.4752)

Irf5 ENSRNOG00000007437 (Rat)

Gene Details

interferon regulatory factor 5 (Irf5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010001, Rat)

Protein Percentage 87.65%
CDS Percentage 86.37%
Ka/Ks Ratio 0.14906 (Ka = 0.0715, Ks = 0.4795)

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location: 7274433..7267680   Strand: -
>XM_004856369.1
ATGAACCAACAGCCCCCTGGGGCTCCCTCTCAGCCCCGCCGCGTGCGGCTGAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCAGTACCCAGGGCTTCAGTGGGTCAATGGAGAAAGGAAATTATTCTACATCCCCTGGCGCCACGCCACGAGGCATGGCCCCAGCCAGGATGGAGACAACACCATCTTCAAGGCCTGGGCCAAAGAGACAGGGAAGTACACTGAGGGGGTGGACGAGGCTGATCCGGCCAAGTGGAAGGCCAACCTACGCTGTGCCCTCAACAAGAGCCGAGACTTCTGCCTCATCTATGACGGGCCCCGGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCACAGAGTCCCAGCCTACTGAGGATTACAATGTGGTTCCAGAAGAGGAGAAGGAAGAGGAAGAAGAAGAAGAGCTTCAGAAGATGTTACCAGAACTGAGACTCACAGAAGCAGTGCAGCCTGGTCCCTCCATGGCACCCTATTCTTTACCTAAAGAAGATGTCAAGTGGCCACCTGTTCTCCCACCGCCTGTGGGGCCTGCCTTGGACCCCAACCTGCTGGTCCCTGCACCTGGTAACCCTGCGAGCTTCGGGCAGCATCTCCCTGAGGTCCTGCCTAGTTCTGAGCCCCTGGCTCCCACCCTGCCCCCTGCAAGTGAACAGCTATTGCCTGACCTGCTCATCAGCCCCCACATGCTGCCTCTGACTGACCTGGAGATCAAGTTCCAGTACCGGGGACGGCCACCCCAAGCCCTCACCATCAGCAACCCACAAGGCTGCCGGATCTTCTACAGCCAACTGCAGGCCACCCAGGAGCAGGTGGAACTTTTTGGCCCCGTGAGCCTGGAGCAAGTTCGCTTCCCCAGCCCTGAAGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTAGACCGTGGGCTCATCCTCCAGCTGCAGGGCCAGGATCTGTATGCCATCCGCCTGTGCCAGTGTAAGGTGTTCTGGAGTGGGCCCTGCGCCTCCACTCAGGGCTCGAGCCCTAACCCCATTCAGCGGGAAGTCAAGACCAAGCTCTTCAGCCTGGAGCAGTTTCTCAATGACCTCATCCTGTTCCAGAAGGGGCGCACTGACACCCCACCACCCATTGAGATCTTCTTCTGCTTTGGGGAGGAATGGCCTGACCGAAAACCCCGAGAGAAGAAGCTCATTACTGTACAGGTGGTGCCTGTTGCAGCACGGTTACTTCTGGAGATGTTCTCAGGAGAGTTTTCTTGGTCAGCTGACAGCATCCGACTGCAGATCTCAAACCCAGACCTCAAAGATCGCATGGTGGAGCAGTTTAAGGAGCTCCATCACATCTGGCAGGCCCAGCAGCAGTTGCAGCCTATGGCCCATGGCCCTCCTGTGGCAGGCTTGAGTGCTGGCCAAGGGCCCTGGCCCATGCACCCCGTTGGCATGCAATAA

Related Sequences

XP_004856426.1 Protein

Irf5 PREDICTED: interferon regulatory factor 5 isoform X1 [Heterocephalus glaber]

Length: 499 aa      View alignments
>XP_004856426.1
MNQQPPGAPSQPRRVRLKPWLVAQVNSCQYPGLQWVNGERKLFYIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFCLIYDGPRDMPPQPYKIYEVCSNGPAPTESQPTEDYNVVPEEEKEEEEEEELQKMLPELRLTEAVQPGPSMAPYSLPKEDVKWPPVLPPPVGPALDPNLLVPAPGNPASFGQHLPEVLPSSEPLAPTLPPASEQLLPDLLISPHMLPLTDLEIKFQYRGRPPQALTISNPQGCRIFYSQLQATQEQVELFGPVSLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASTQGSSPNPIQREVKTKLFSLEQFLNDLILFQKGRTDTPPPIEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGEFSWSADSIRLQISNPDLKDRMVEQFKELHHIWQAQQQLQPMAHGPPVAGLSAGQGPWPMHPVGMQ