Details from NCBI annotation

Gene Symbol Zc3hc1
Gene Name zinc finger, C3HC-type containing 1
Entrez Gene ID 101701762

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC3HC1 ENSCPOG00000014034 (Guinea pig)

Gene Details

zinc finger, C3HC-type containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012640, Guinea pig)

Protein Percentage 90.0%
CDS Percentage 90.54%
Ka/Ks Ratio 0.22042 (Ka = 0.0533, Ks = 0.2418)

ZC3HC1 ENSG00000091732 (Human)

Gene Details

zinc finger, C3HC-type containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000351052, Human)

Protein Percentage 88.82%
CDS Percentage 87.82%
Ka/Ks Ratio 0.16504 (Ka = 0.0608, Ks = 0.3684)

Zc3hc1 ENSMUSG00000039130 (Mouse)

Gene Details

zinc finger, C3HC type 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100057, Mouse)

Protein Percentage 82.29%
CDS Percentage 82.85%
Ka/Ks Ratio 0.19644 (Ka = 0.1037, Ks = 0.5281)

Zc3hc1 ENSRNOG00000010154 (Rat)

Gene Details

zinc finger, C3HC-type containing 1 (Zc3hc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013606, Rat)

Protein Percentage 83.6%
CDS Percentage 83.8%
Ka/Ks Ratio 0.1909 (Ka = 0.0947, Ks = 0.4962)

Genome Location

Sequence Coding sequence

Length: 1506 bp    Location: 6218209..6244068   Strand: +
>XM_004856338.1
ATGGCGGCGCCCAGTGACGGACAGGCGTTTGCCGCGGGGTCTGAAAAGAGTTGGGGTGTTGTTCGTTCCCCAGAAGGAACACCCCAGAAAGTCCGGCAGCTGATAGATGAGGGGATTGCCTCGGAAGAGGGAGGAGCAGAGGCAAAGGACATGTCTGCCACGTTCCAGTCAGTTAATGGATCACCTCAAGCAGAGCAACCTCCACTGGAATCTACAAGCAAAGAAGCCTTCTTTAGCAGAGTAGAAACATTTTCTTCTTTGAAATGGGCAGGAAAGCCCCCTGAGCTCTCCCCACTTGTGTGTGCAAAATATGGCTGGGTCACAGTTGAGTGTGACATGCTCAAGTGCTCCAGCTGCCAAGCTTTTCTTTGTGCCAGTCTACAGCCGGCTTTTGACTTTGACAGATATAAGGAACGATGTGAAGAGCTGAAGAAATCCTTATGTACTGCCCATGAGAAGTTCTGTTTTTGGCCAGACAGCCCCTGTCCAGATCGATTTGGGATGTTGCCATTGGATGAACCTGCAGTTCTTGTCAGTGAATTCCTTGATCGTTTTCAAAGCCTTTGTCACTTGGACCTCCAGCTCCCTTCCCTGAGGCCAGAAGACTTAAAAACTATGCGCTTGACGGAAGACAAGGTCAGCCTTCTGCTAAACCTGCTTGAAGAGGAACTTGATCACCAAACCGATGAGAGAAAAGCTACAAGCAAATTGGGCTCAGACATCCAAGTCCACGTCACTGCCTGTATTCTCTCTGTGTGCGGCTGGGCATGTAGTTCATCTCTGGAACCCATGCAGCTCTCCCTGATAACCTGCTCACAGTGTATGAGGAAGGTGGGGCTCTGGGGCTTCCAGCAGATTGAGTCATCCATGACCGACCTGGATATGTCCTTTGCCCAGACCAGCTCCCCCATCGCAGGGCCTGAGGGTCGGCAAGAGCGCTTCCCTCCAGTACCCGAATCTCCTCGGAGGATAATGACCCGGAGCCAGGATACCACATTTTCTCCATCCTCAGAGCAGGCTGAAAAGAGCCCAGGTCCCACTGTCTCCCGAACACGGAGCTGGGACTCTTCCAGTCCTGTGGACCGGCCGGAGCCAGAGACAGCCAGCCCCACCGCCAGAACCCGCCCCGTGACCCGGAGCATGGGCACAGGGGACACCACTGGTCTGGAAGTGCCCTCCAGCCCTCTCCGGAGAGCCAAGCGTGCTCGCCTCTGCTCCTCAGGCAGCTCAGACACATCTTCAAGAAGCTTCTTTGATCCCACCTCTCAGCACAGAGACTGGTGCCCTTGGGTGAACAGCACATTTGGCAGAGAAGCCAAGGAAAACGGGGGAACAGAGCAGGATACCAGCACCCCAGCAGAACCAGGCTGGAAGGCAGTGCTGACCGTGCTGCTGGCGCATAAGCAGTCCAGCCAGCCAGCTGAAGCAGACCCTGTGAGTCTGTCTGAGAAGTCAAGGAAAGTATTCCGAATATTCCGGCAGTGGGAATCTTTATGCTCATCCTGA

Related Sequences

XP_004856395.1 Protein

Zc3hc1 PREDICTED: nuclear-interacting partner of ALK [Heterocephalus glaber]

Length: 501 aa      View alignments
>XP_004856395.1
MAAPSDGQAFAAGSEKSWGVVRSPEGTPQKVRQLIDEGIASEEGGAEAKDMSATFQSVNGSPQAEQPPLESTSKEAFFSRVETFSSLKWAGKPPELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKERCEELKKSLCTAHEKFCFWPDSPCPDRFGMLPLDEPAVLVSEFLDRFQSLCHLDLQLPSLRPEDLKTMRLTEDKVSLLLNLLEEELDHQTDERKATSKLGSDIQVHVTACILSVCGWACSSSLEPMQLSLITCSQCMRKVGLWGFQQIESSMTDLDMSFAQTSSPIAGPEGRQERFPPVPESPRRIMTRSQDTTFSPSSEQAEKSPGPTVSRTRSWDSSSPVDRPEPETASPTARTRPVTRSMGTGDTTGLEVPSSPLRRAKRARLCSSGSSDTSSRSFFDPTSQHRDWCPWVNSTFGREAKENGGTEQDTSTPAEPGWKAVLTVLLAHKQSSQPAEADPVSLSEKSRKVFRIFRQWESLCSS