Details from NCBI annotation

Gene Symbol Podxl
Gene Name podocalyxin-like
Entrez Gene ID 101723514

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PODXL ENSCPOG00000014031 (Guinea pig)

Gene Details

podocalyxin-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012638, Guinea pig)

Protein Percentage 67.19%
CDS Percentage 79.71%
Ka/Ks Ratio 0.76212 (Ka = 0.2274, Ks = 0.2983)

PODXL ENSG00000128567 (Human)

Gene Details

podocalyxin-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000367817, Human)

Protein Percentage 48.1%
CDS Percentage 57.86%
Ka/Ks Ratio 0.4402 (Ka = 0.5418, Ks = 1.2307)

Podxl ENSMUSG00000025608 (Mouse)

Gene Details

podocalyxin-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026698, Mouse)

Protein Percentage 48.0%
CDS Percentage 57.93%
Ka/Ks Ratio 0.49519 (Ka = 0.5463, Ks = 1.1032)

Podxl ENSRNOG00000012495 (Rat)

Gene Details

podocalyxin-like (Podxl), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016991, Rat)

Protein Percentage 48.96%
CDS Percentage 57.95%
Ka/Ks Ratio 0.46044 (Ka = 0.5328, Ks = 1.1572)

Genome Location

Sequence Coding sequence

Length: 1605 bp    Location: 4840199..4888705   Strand: +
>XM_004856317.1
ATGCACACTGCGCTGGCGCTCTCGGCGCTGCTGCTTGTGCTGCGATCGCCACTTGCGTCGCTCTCCCAAAATGACGCATCCCAGCCCAGTATTGGCACAACTGCCTCAACACAGACTCCTACAAAACCTGTGACGGAATCTCCTGCCTCCTCAAGCCAGTCAAGCCCATCTTCAGTTTCCACTACTCCAATAGAGACTTCCACAACAGAGCTCTCCAGTTCACTGAAGACAGACCAAGTCCTGGGAAGCAGCTCTGCAGGTTTCACAGGCTCACCTCAGCAAAGCACCTCTGTGACTCTATCCCCTGACCCGAGTAACACAGCTGCTACAACTACCGTGGACTCACAGGGTGGGAGCCCTGGCCATCCCGCCACCACCACCTCCACCACGCCTGAGAACACAAGCAACAGTGGCACCCCTGCTACCACACACCCCGTGTCCACTTCACAAAACCAACTGGAGACCTCTCCATCTCAAGATCTACCCCTGAAGACCACAGCACCCACTCATGCCCCTTCACTGCCCAGTACAGGAAGCTCTAACCCACTGGCTAGTGTTACTGCTGTGCCCTCTGGGAGCTCCCCTCAGGGACAGAAGAGCTCCACCACGCCTTCCAGTAGTTCAGGCCTTCTGCCCGACTCTGGTCTCACCCCCACAGCCCAGAGGACACTCACCACTCAAACACCAGTGGACCTGTCACCTGGGACTCAGCAGGCCTCCAGCATGCGGCCGGCCAGCCAGGTGCCGGCCAGCCCCATGTCTGGCAGCCAGATGCCTCCTAGCCCTTCACCCTCTTCCTCTGTGACACCACAGCCCACGGATTCTCCAACGGGAACTGTGACTGTGCCTGGCATCAGGGGACCCACAAGCCTCAGCACTGTTTCGGCTTCCCAAAGCCCCAGCATACCCACTAAACTCTGGAATTTTGGGAATAAGACGGTACTTTGCGAGTCTCTCAAGGAGTCAATTGACAAGCTGCTTGTCTTGAACTTGACAAGCAAGGGAACCAACCCGGGAACCAACCACTGCAATAAGAATCTCCTGAACGAGAATCTGGTGACAGTGCTGTGCCGGGCAGTCAAAGCCAACTTCAACCCTGGTCAAGATAATTGCAATGTTCAGCTAGCACCTGTTCCCAATAGCCATGCAGTGGCCATCAAACACATTAGCATTCAGACAAACCTTCTTCCCACGGATGTGTATAAATCACTGAAGGACCAATGGGATGAACTAGAAGAGTTGGGAGTCAGTGACATGAAGCTGGGGGATGATGGTCCACCGGAAATGACAGAGGACCGCTACAGCATGCCTCTCATCATCACTATCGTCTGCATGGCATCCTTCTTGCTCCTCGTTGCAGCCCTCTATGGCTGCTGCCACCAGCGCTTCTCCCAGAGGAAGGATCAGCAACGACTTACTGAGGAGCTACAGACAGTGGAAAATGGTTACCATGACAACCCAACCCTGGAAGTGATGGAGACCTCTTCCGAGATGCAGGAGAAGAAGGTGGTCAACCTTAATGGGGAGCTTGGGGACAGTTGGATCGTCCCTCTGGACAACCTGACCAAGGATGACCTAGATGAGGAGGAAGACACACACCTCTAG

Related Sequences

XP_004856374.1 Protein

Podxl PREDICTED: podocalyxin [Heterocephalus glaber]

Length: 534 aa      View alignments
>XP_004856374.1
MHTALALSALLLVLRSPLASLSQNDASQPSIGTTASTQTPTKPVTESPASSSQSSPSSVSTTPIETSTTELSSSLKTDQVLGSSSAGFTGSPQQSTSVTLSPDPSNTAATTTVDSQGGSPGHPATTTSTTPENTSNSGTPATTHPVSTSQNQLETSPSQDLPLKTTAPTHAPSLPSTGSSNPLASVTAVPSGSSPQGQKSSTTPSSSSGLLPDSGLTPTAQRTLTTQTPVDLSPGTQQASSMRPASQVPASPMSGSQMPPSPSPSSSVTPQPTDSPTGTVTVPGIRGPTSLSTVSASQSPSIPTKLWNFGNKTVLCESLKESIDKLLVLNLTSKGTNPGTNHCNKNLLNENLVTVLCRAVKANFNPGQDNCNVQLAPVPNSHAVAIKHISIQTNLLPTDVYKSLKDQWDELEELGVSDMKLGDDGPPEMTEDRYSMPLIITIVCMASFLLLVAALYGCCHQRFSQRKDQQRLTEELQTVENGYHDNPTLEVMETSSEMQEKKVVNLNGELGDSWIVPLDNLTKDDLDEEEDTHL