Sequence details NCBI ID: XM_004856315.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chchd3
Gene Name coiled-coil-helix-coiled-coil-helix domain containing 3, transcript variant X2
Entrez Gene ID 101722598

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHCHD3 ENSCPOG00000000871 (Guinea pig)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000784, Guinea pig)

Protein Percentage 95.45%
CDS Percentage 94.09%
Ka/Ks Ratio 0.12939 (Ka = 0.0224, Ks = 0.1731)

CHCHD3 ENSG00000106554 (Human)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000262570, Human)

Protein Percentage 91.19%
CDS Percentage 91.04%
Ka/Ks Ratio 0.21014 (Ka = 0.0504, Ks = 0.2396)

Chchd3 ENSMUSG00000053768 (Mouse)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070149, Mouse)

Protein Percentage 88.99%
CDS Percentage 87.81%
Ka/Ks Ratio 0.14123 (Ka = 0.0599, Ks = 0.4243)

Chchd3 ENSRNOG00000013211 (Rat)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 3 (Chchd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018001, Rat)

Protein Percentage 87.22%
CDS Percentage 86.34%
Ka/Ks Ratio 0.14981 (Ka = 0.0716, Ks = 0.478)

Genome Location

Sequence Coding sequence

Length: 684 bp    Location: 3331004..3607240   Strand: +
Raw sequence   
>XM_004856315.1
ATGGGCGGGACCGCCAGCACCCGCCGGGTCACCTTCGAGGCGGACGAGAATGAGAACATCACCGTGGTGAAGGGCATCCGGCTGTCAGAAAATGTAATTGATCGAATGAAGGAATCCTCCCCATCTGGTTCGAAGTCTCAGCGGTATTCTGGTATTTATGGTGCCTCAGTTTCTGATGAAGAATTGAAAAGAAGAGTGGCTGAAGAACTGGCATTGGAGCGAGCCAAGAAGGAATCTGAGAATCAGAAACAACTAAAGAAAAGCAAGGACCTAGACCGAGAGAGGGCTGCAGCCAGTGAGCAGTTAACCAGAGCTATCCTTCGAGAGAGGATATCAAATGAAGAAGAACGCTCGAAGGCAAAGCACTTGGCTAAGCAGCTGGAAGAGAAAGACCGAATGATAAAGAAGCAGGATGCGTTCTACAAAGAGCAGCTGGCTAGACTGGAGGAGAGGAGTTCAGAGTTCTACAAAGTTACCACTGAGCAATATCAGAAAGCTGCTGAAGAAGTAGAAGCGAAGTTCAAGCGGTATGATTATCATCCAGTCTGTGCTGATCTGCAGGCCAAAATCCTCCAGTGTTACCGTGAGAACACCCACCAGACCCTCAGCTGCTCTGCTCTGGCTAACCAGTACATGCACTGTGTTAATCATGCCAAACAGAGCATGCTGGAGAAGGGAGGATAA

Related Sequences

XP_004856372.1 Protein

Chchd3 PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial isoform X2 [Heterocephalus glaber]

Length: 227 aa      View alignments
>XP_004856372.1
MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSGIYGASVSDEELKRRVAEELALERAKKESENQKQLKKSKDLDRERAAASEQLTRAILRERISNEEERSKAKHLAKQLEEKDRMIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYDYHPVCADLQAKILQCYRENTHQTLSCSALANQYMHCVNHAKQSMLEKGG