Details from NCBI annotation

Gene Symbol Fam188b
Gene Name family with sequence similarity 188, member B, transcript variant X2
Entrez Gene ID 101711715

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM188B ENSCPOG00000011378 (Guinea pig)

Gene Details

family with sequence similarity 188, member B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010228, Guinea pig)

Protein Percentage 86.53%
CDS Percentage 90.13%
Ka/Ks Ratio 0.35702 (Ka = 0.0736, Ks = 0.2062)

FAM188B ENSG00000106125 (Human)

Gene Details

family with sequence similarity 188, member B

External Links

Gene Match (Ensembl Protein ID: ENSP00000265299, Human)

Protein Percentage 78.57%
CDS Percentage 83.25%
Ka/Ks Ratio 0.28018 (Ka = 0.1232, Ks = 0.4398)

Fam188b ENSMUSG00000038022 (Mouse)

Gene Details

family with sequence similarity 188, member B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061221, Mouse)

Protein Percentage 75.91%
CDS Percentage 79.5%
Ka/Ks Ratio 0.25531 (Ka = 0.1528, Ks = 0.5986)

Fam188b ENSRNOG00000011530 (Rat)

Gene Details

family with sequence similarity 188, member B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015469, Rat)

Protein Percentage 75.24%
CDS Percentage 78.78%
Ka/Ks Ratio 0.24003 (Ka = 0.1556, Ks = 0.6484)

Genome Location

Sequence Coding sequence

Length: 2292 bp    Location: 30312..146524   Strand: +
>XM_004856285.1
ATGGACAGCCTCTTTGTAGAGGAGGTGGCCGCCTCCCTGGTCAGGGAGTTTCTCAGCAGAAAGGGCCTAAAGAAGACATGTGTGACCATGGACCAGGAACGCCCTCGCTCTGACCTCAGCATAAACAGCAGAAATGATCTCCGGAAAGTTTTGCATCTTGAGCTTCTCTACAAGGAGAACAAGGCAAAGGAAAAGCCTCTAAAAACAAGCCTTGAACTCATTACTAGATACTTTTTGGATTACTCTGGAAATGTGGATAAAAATTTAAACCAAGAAACTCCAATCCCTGCACTCTCAATTCCAAAGAAAGATAACAAATTGCTGGCAAGATGCTCAGAGACCACGCTGGTGAATATATATGACCTTTCAGATGAAGACACAGGTTGGAGAACATCACTGGCAGAAACAAGCAAGGCCAGACAAGACAGTCTTGATGGAGATATACCTGGTAATTTATCATGCAAAAGGCCCCCACACAAGAGTAAGCCTGGGCACATAGTACCAGATGGAAGCACCCCTTTGGCATCTGCATGGGAGAAGGTGGACAAGCTGCACTTGCTGGATCCTTGCACTGATGTGAAGAAGGCAGGAGAGAAGGCCAGACCCAAGTCTGGCCTGATTTTCCGAGGGATGATGGCTGGACCCATGGACAGTTCCTCACAGGATTCTTTCCACAAACGCTCTCTGAGATGGTCCCTGACCTCAAGCAGCAAGACTCAACGCCAGGAGGAAGAGAACCCCATGGTGCCTGACCTCTCTGGTGGCACCCCAGCACGTCTAGCCCCACAGGTGGTCCCTGCTTCCAGTAATGACTCCATCTCCAGGAGCCCCCTAGGCCAGCTTAGCGAACCATCCAAGGAAAAGCAGAAAACCACCCCCAGCAGCCCTTCCCACCTGCCCAGCAAAGGGCTGCTCCCACGAGATAGAGCACCATTCAGAGGTCTTTCAGGGGATGAGCCAGCAGTGGATGGCCACACAGAGGGGGAGAGGATTTCCCCGAAGTTGTACTTGCCTGGTGGAAATCCCAGGGTGATCCAAGAGAGGCTGGAAAGAGCGTTCAAGCATCAGGGCAGCCAGCCCTCACCTCTCAGAAAGAGTCAATTGCCAGCGTCTGACAAGGTGGATGATGAGCTGGGTGCCCTGCGGCTCGAGGACGTGGAGGATGAGTTAATAACGGAAGACATCATCCTGGCCCCAGCTCCATCAATGCTCAAGCTGCAGATAGTGTCAAAGCCAATTGACCTCTCAGCAGCCAAGGAAATCAAGACCCTTCTGTTTGGTTCTACCTTTTGCTGCTTCAATGAGGAATGGAGGCTTCAGAGCTTTTCCTTTAGTGACATACCCTCATTGAGATACGGCATCGTGCAGAGCAAGGGTGGCCCCTGTGGGGTGCTGGCGGCCATCCAAGGCTGTGTGCTGCAGAAGCTCCTGTTTGGAGGCGAGAGTGGAGCCAACTGTGCTGTGCAGCTGCAGCCTTCAGATGCCCTTCGCACCCGCTGCCTGGCCCTGGCCATTGCAGATATCCTCTGGCGGGCTGGGAGCCGAAAGCGAGCTGTGGTCACCCTGGCTTCTGGAACACAGCAGTTCAGTCCAACAGGGAAATACAAAGCAGATGGAGTCTTAGAAACACTCATGCTCCACAGTGTGACGTGCTATGAGGAGCTGGTGACTTTTCTCCAACACACTGTGCATCAGTTCGAAGTGGGCCCCTACGGATGCATCCTTCTTACCCTGTCTGCCATCCTTTCCAGGTCCTCGGAGCTTGTCCGCCAAGACTTCGACGTCCCCACCAGTCACCTGATTGGAGCACATGGATACTGCACACAGGAACTTGTCAATCTGCTGCTGACTGGGAGAGCTGTATCCAATGTTTTCAACGATGTGGTGGAGCTGGATTCTGGGAATGGAAACATCACACTCCTCCGAGGCATTTCGGCCCAAAGTGACATTGGTTTCTTATCCCTCTTTGAGCACTACAGTGTGTGCCAGGTCGGCTGCTTCCTGAAGACCCCAAAGTTCCCCATCTGGGTGGTGTGCAGCGAGAGCCACTTCAGCGTCCTCTTCAGCCCGAAGCCTGAGCTCCTCTCCGATTGGAGGGCTGAGCGGCTCTTTGACCTGTACTACTATGACGGCCTGGCCAACCAGCAGGAGGAGATCCGGCTGACTGTTGACACCACCCGGACCATCCCTGAGGACAGTGGCAAGGACCTCATCCCTCCTCTGGAACTCTGCATCAGGACCAAGTGGAAGGGGGCTTCGGTGAATTGGAATGGCTCAGACCCCATCCTGTGA

Related Sequences

XP_004856342.1 Protein

Fam188b PREDICTED: protein FAM188B isoform X2 [Heterocephalus glaber]

Length: 763 aa      View alignments
>XP_004856342.1
MDSLFVEEVAASLVREFLSRKGLKKTCVTMDQERPRSDLSINSRNDLRKVLHLELLYKENKAKEKPLKTSLELITRYFLDYSGNVDKNLNQETPIPALSIPKKDNKLLARCSETTLVNIYDLSDEDTGWRTSLAETSKARQDSLDGDIPGNLSCKRPPHKSKPGHIVPDGSTPLASAWEKVDKLHLLDPCTDVKKAGEKARPKSGLIFRGMMAGPMDSSSQDSFHKRSLRWSLTSSSKTQRQEEENPMVPDLSGGTPARLAPQVVPASSNDSISRSPLGQLSEPSKEKQKTTPSSPSHLPSKGLLPRDRAPFRGLSGDEPAVDGHTEGERISPKLYLPGGNPRVIQERLERAFKHQGSQPSPLRKSQLPASDKVDDELGALRLEDVEDELITEDIILAPAPSMLKLQIVSKPIDLSAAKEIKTLLFGSTFCCFNEEWRLQSFSFSDIPSLRYGIVQSKGGPCGVLAAIQGCVLQKLLFGGESGANCAVQLQPSDALRTRCLALAIADILWRAGSRKRAVVTLASGTQQFSPTGKYKADGVLETLMLHSVTCYEELVTFLQHTVHQFEVGPYGCILLTLSAILSRSSELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGRAVSNVFNDVVELDSGNGNITLLRGISAQSDIGFLSLFEHYSVCQVGCFLKTPKFPIWVVCSESHFSVLFSPKPELLSDWRAERLFDLYYYDGLANQQEEIRLTVDTTRTIPEDSGKDLIPPLELCIRTKWKGASVNWNGSDPIL