Sequence details NCBI ID: XM_004856278.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101704492

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000003088 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002796, Guinea pig)

Protein Percentage 74.16%
CDS Percentage 81.93%
Ka/Ks Ratio 0.27431 (Ka = 0.1495, Ks = 0.5451)

Sept1 ENSMUSG00000000486 (Mouse)

Gene Details

septin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101921, Mouse)

Protein Percentage 74.23%
CDS Percentage 78.34%
Ka/Ks Ratio 0.13662 (Ka = 0.1466, Ks = 1.0728)

Sept1 ENSRNOG00000017804 (Rat)

Gene Details

septin 1 (Sept1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051893, Rat)

Protein Percentage 73.67%
CDS Percentage 78.06%
Ka/Ks Ratio 0.14203 (Ka = 0.1514, Ks = 1.0661)

Genome Location

Sequence Coding sequence

Length: 1224 bp    Location: 13553752..13550085   Strand: -
Raw sequence   
>XM_004856278.1
ATGACTCAGGCGATGAGAAGCATTGCCTGCCACGCCCTGGAGCCTCACGAGGTCCCCTTACCCCGCCAGCAGGACAAGGAATATGTGGTTTCCGGTTTCGAGGCCCTCCCCCACCAGCTGCACCACAGGTCTGTCAAGAAAGTGTTTGACTTCACACTCACGGTGGCAGGGGAGGCAGGGCTGGGAAAATCCACCCTCAACAGCCTCTGTGAGGACCGACAGGTGCCAGGGCCCAGCGCTCACTGGACTCAAACGCTGACCCTGACTGTCGAGCAGCACGGTGCGGAGATAGAGGGAATGAAGGTGAAGCTGACCTTGGCGGACACGCCCGGCTTTGGGGACGCTGCGGACTGCGCAGACTGCTGGTTGCCAGAGGTTCGCTTCATTGAGGAACAATTTGAGCAGTATCGCCGGGATGAGAGCAGCTTGAATGGGAAGAACATCCAGGATTCCCGAGTGCACTGCTGCCTCTGTTTCATCTTGCCCTTCGGCCAGGGCCCTGACCAACCCCTGGTGGACGTGGCCTTCCTCCGGGCCGTGCATGAGAAAGTCAACCTCATCCCCATAGTCGGCAAAGCAGACGCCCTGACACCCAAGGAAACCCAGGCTCTCAAGCAGATGATCCGGGACCAGTTGAAGGAGGAGGAGATCAACGTCTACCAGTTCCCAGAATGTGACTCCGATGAGGATGAACAGTTCAAGCGGCAGGATGCCGAGATGAAGGGGAGCGTCCCTTTCGCAGTCGTGGGCTCCTGCGAGGTGGTGAGGGACGGTGGGAAGAGGCCAGTGAGGGGACACTACTACCCCTGGGGCACCGTGGAGGTGCAGAACCCGCACCAATGCGACTTCTTGGCCCCGAGGTGCACGCTGGTGCAGACACCCAGGCACGACTTGAAGGAGGTGACGCACGAGCTGCTCTGCGAAGGCTACTGGACCCGCTGCCTGCAGAGCCTGGCCCGCCCCGGGGCGCGGGACCGCCCCAGCCGCAGCAAGCTCGCCCGCCAGAGCGCCACCGAGAGCCCGCTGCCCGCAATGCCCCTGGCCGAGGCGAAGCTGATCCGTGAGAAGGACGAGGAGCTGCGCCGCGTGCAGGAGGTGCTGGCGAGGATGCGGATGCGCAGTGAGCAGGATCGCCGCCCCGCCCCTCGTCTCATCAATCAAAACAGCTTCCCGCCGGCCGCGTGCCTCCTTCCGGGCGGTGGAGCCGCCTCTCTCGGGTTGTGA

Related Sequences

XP_004856335.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: septin-1 [Heterocephalus glaber]

Length: 407 aa      
>XP_004856335.1
MTQAMRSIACHALEPHEVPLPRQQDKEYVVSGFEALPHQLHHRSVKKVFDFTLTVAGEAGLGKSTLNSLCEDRQVPGPSAHWTQTLTLTVEQHGAEIEGMKVKLTLADTPGFGDAADCADCWLPEVRFIEEQFEQYRRDESSLNGKNIQDSRVHCCLCFILPFGQGPDQPLVDVAFLRAVHEKVNLIPIVGKADALTPKETQALKQMIRDQLKEEEINVYQFPECDSDEDEQFKRQDAEMKGSVPFAVVGSCEVVRDGGKRPVRGHYYPWGTVEVQNPHQCDFLAPRCTLVQTPRHDLKEVTHELLCEGYWTRCLQSLARPGARDRPSRSKLARQSATESPLPAMPLAEAKLIREKDEELRRVQEVLARMRMRSEQDRRPAPRLINQNSFPPAACLLPGGGAASLGL