Sequence details NCBI ID: XM_004856249.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Armc5
Gene Name armadillo repeat containing 5, transcript variant X2
Entrez Gene ID 101720472

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARMC5 ENSCPOG00000010294 (Guinea pig)

Gene Details

armadillo repeat containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009244, Guinea pig)

Protein Percentage 92.81%
CDS Percentage 90.27%
Ka/Ks Ratio 0.1733 (Ka = 0.0439, Ks = 0.2533)

ARMC5 ENSG00000140691 (Human)

Gene Details

armadillo repeat containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000268314, Human)

Protein Percentage 87.04%
CDS Percentage 84.8%
Ka/Ks Ratio 0.17276 (Ka = 0.081, Ks = 0.4688)

Armc5 ENSMUSG00000042178 (Mouse)

Gene Details

armadillo repeat containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040568, Mouse)

Protein Percentage 87.24%
CDS Percentage 83.57%
Ka/Ks Ratio 0.1618 (Ka = 0.0827, Ks = 0.5112)

Armc5 ENSRNOG00000019935 (Rat)

Gene Details

armadillo repeat containing 5 (Armc5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027032, Rat)

Protein Percentage 87.03%
CDS Percentage 84.25%
Ka/Ks Ratio 0.19421 (Ka = 0.0858, Ks = 0.4421)

Genome Location

Sequence Coding sequence

Length: 2829 bp    Location: 14461692..14468404   Strand: +
Raw sequence   
>XM_004856249.1
ATGGCGGCTACGAGAGCAACCCTCACGGACTCGCTCTCGTTTTGCCTCGCGCAACTCACGGCGGCGGCCGGGGAGGGTCTTGCTGGGGGAAAGGACCCAGCTATCAACGAGACACCCCTGGGTCGGGCGCTTTTGGCTCTCCGCACGCGCCACATCAAAGCAGCGGGGGGAATCGAGCGCTTCCGGGCACGCGACGGGCTCCGCCCCCTTCTCGCCCTGCTACGGCGAGCTGCTGCGGACCCCGCCCCGTCACACGCAGGCCCAGGCTCCGCCCCCTTGTCTGTTGCGTCAGCTGCTTCTGCTGGTCCCTCCCCCTCCCCTAGCCCTCCCTCTTCTGTGTCGCTGTCGACGTCTTCGCCGCCAGTGCGCCTGCGCAAAACTCTGGACTTGGCGCTCAGCATCCTAGCCAACTGCTGTACGGAAGGGGCGTGCCGGGCTGAAGTGCGCAGACTCGGAGGCATTCTCCCTTTAGTGACCATTCTGCAGTGTGTGAAGACAGACAGCATCCAGAACCGAACGGCTCGTGCTCTTGGGAACTTAGCCGTGGAACCGGAGAGCTGTGGGGAGATCCACTCTGCTGGTGCTGTTCCCTTGCTCGTGGAGAGCCTGACAGCCTGTCAGGACTCACAGTGCCTTCAGAGCGTGGTGCGTGCCCTCCGCAACCTGGCAGACTCCCCGCAGCACCGCCTGGCCCTGGCCCAGCAGGGAGCCGTGCGCCCCCTGGCTGAGCTCCTGGCCGCTGCCCCAGATCCTGCACTGACCTCAGCCCTTGTCCGTGCCCTCCTGGAACTCAGCCGTGGCTGTTCCCGGGCCTGTGCTGAGCAGCTGAGTCTGGGTGGGGGGCTGGGGCCACTTGTCAGCCTGGCTTCTCACCCGAAACGTATGGTACGTGAAGCAACCATCCTGATCCTTGCCAACCTGTGTGCCCAGGGCCTAGTCCGGCCTGCACTGGGCAATGCTGGCGGTGTGGAGGTGTTATTAGGTGAGCTCCGGCGACGCCGGGGCCCCAGTGGGGCCAGCCCAGCTTCTCAGCAGCCCCTGGTGCGGGCTGTGTGCCTTCTGTGCCGGGAGGCCATCAACCGAGCCCGCCTGCGGGATGCTGGTGGCCTAGAGGTGCTGATGGGCCTGCTGCGGGATCCTCATGCCAGCGCCTGGCATCCACGGGTCGTGGCCGCGCTTGTGGGCTTCCTGTATGACACCGGGGCCCTGGGCCGCCTGCAGGCTCTGGGACTTGTACCTCTCCTGGCTGGGCAGCTGTGTGATAACACTGGTGAAGAGGAAGAGGAGGGAAGAGAAGCTGCTTCCTGGGACTTCCCTGAGGAGCGGACCCCTGAGCGGGCAGAGGCTGGGAGCTTCCGAAGCCTCAGGTCATGGCTGATCTCTGAGGGCTACGCTGTGGGCCCCGGAGATGTCTCTCCAGACTGGTCTCCTGAGCACTTCCCGCTGCCGGAGCCAGCAGACTCCATCAGTAACACCCCTGGGAAGACCTCGCTCCGGACCCCATGCACACTGCACACCCTGGGCTACAGCCCCACTGCCGCTGCCGCCACCGCTGCCGAGGAGCCCTGGGGCCGGGAAGGGCCAGCACTGCTGCTGCTCTCGCGCTTCTCCCAGGCCCCTGACCCGAGCGGGGCACTTGTGACTGGTCCAGCGCTGTGTGGCTTGCTGGCCTATGTGACAGGTGCGCCAGGCCCTCCAAGCCCACGTGCACTCCGCATCCTGGCACGCCTTACCTGCAACCCTGCCTGCCTTGAGGCCTTTGTGCGCAGCTATGGTGCGGCACTGCTGCGTGCTTGGCTAGTACTCGGCGTCGCGCCGGACGACTGGCCTGCACCCCGGCCCCGGCCCGTGTGTCGAAACCAGCACCGAGAGCTGGGGGAGATGCTGCTGCAGAACCTGACTGTCCAGGCCGAGTCACCTTTCGGAGTAGGTGCCCTCACGCATTTGCTGCTCTCTGGAAGCTCTGAGGATCGTGTAGCCTGTGCACTGACCCTGCCCTTCATCTGCCGGAAGCCCTCCCTGTGGCGCAGACTGCTTCTGGACCAGGGCGGCCTCCGCCTCCTCCTCACAGCATTAACTCGGCCAGCTCCGCACCCACTCTTCCTCTTCTTTGCTGCGGACTCCCTTTTCTGCCTCCAAGGCCTGGTGTCTCCTGTCATGAGCCCAGCCTTTCCACCTGAAACCCCCGTGGAGCTAGACCCTCCCTCCCCTTGCCTCTACGAGCCTCTGCTGGGTCCAGCTCCTGTCCCAGCGCCTGACCTGTATTTCCTGCTGGACTCGGGCCTACAGCTCCCTGCTCAGCGAGCAGCCTCAGCAACTGCCTCCCCGTTCTTCCGGGCCCTGCTGTCTGGCAGCTTTGCTGAAGCCAAGATGGACCTGGTGCCACTTCGAGGCCTGTCCCCCAGTGCAGCCTGGCCTGTCCTGCATCACCTGCATGGCTGCCGGGGCTGTGGGGCTGCGCTGGGGCCCGTGCCCGCACCAGGCCAGCCCCTGTTGGGCTCGGACGCTGAGGAGGCCTTGGAGGCTGCTGCCCGTTTCTTGCTGCCTGGGCTTGAGGAGGAGCTGGAAGAGGCTGTGGGCCGCATCCACTTGGGTGCAGAGGGTGCCCCAGAATCAGTGGTTGAGGTATTCCGCCTGGGCCGGCCCCGACTAGCTGCCCTTTGTGCACGCTGGACACTGGGGCCAGGGCAGTGCCCAAGGAAGCGGGCCCTGGCCCTTGTGGGACTTGTGGAGGCAGCAGGTGAGGAGGCAGGGCCTCTAACTGAGGCTTTACTGGCCGTGGTGATGGGGATTGAGTCAAGGGACAAGGGTCCCAGCCTAGATGGTTGA

Related Sequences

XP_004856306.1 Protein

Armc5 PREDICTED: armadillo repeat-containing protein 5 isoform X2 [Heterocephalus glaber]

Length: 942 aa      View alignments
>XP_004856306.1
MAATRATLTDSLSFCLAQLTAAAGEGLAGGKDPAINETPLGRALLALRTRHIKAAGGIERFRARDGLRPLLALLRRAAADPAPSHAGPGSAPLSVASAASAGPSPSPSPPSSVSLSTSSPPVRLRKTLDLALSILANCCTEGACRAEVRRLGGILPLVTILQCVKTDSIQNRTARALGNLAVEPESCGEIHSAGAVPLLVESLTACQDSQCLQSVVRALRNLADSPQHRLALAQQGAVRPLAELLAAAPDPALTSALVRALLELSRGCSRACAEQLSLGGGLGPLVSLASHPKRMVREATILILANLCAQGLVRPALGNAGGVEVLLGELRRRRGPSGASPASQQPLVRAVCLLCREAINRARLRDAGGLEVLMGLLRDPHASAWHPRVVAALVGFLYDTGALGRLQALGLVPLLAGQLCDNTGEEEEEGREAASWDFPEERTPERAEAGSFRSLRSWLISEGYAVGPGDVSPDWSPEHFPLPEPADSISNTPGKTSLRTPCTLHTLGYSPTAAAATAAEEPWGREGPALLLLSRFSQAPDPSGALVTGPALCGLLAYVTGAPGPPSPRALRILARLTCNPACLEAFVRSYGAALLRAWLVLGVAPDDWPAPRPRPVCRNQHRELGEMLLQNLTVQAESPFGVGALTHLLLSGSSEDRVACALTLPFICRKPSLWRRLLLDQGGLRLLLTALTRPAPHPLFLFFAADSLFCLQGLVSPVMSPAFPPETPVELDPPSPCLYEPLLGPAPVPAPDLYFLLDSGLQLPAQRAASATASPFFRALLSGSFAEAKMDLVPLRGLSPSAAWPVLHHLHGCRGCGAALGPVPAPGQPLLGSDAEEALEAAARFLLPGLEEELEEAVGRIHLGAEGAPESVVEVFRLGRPRLAALCARWTLGPGQCPRKRALALVGLVEAAGEEAGPLTEALLAVVMGIESRDKGPSLDG