Details from NCBI annotation

Gene Symbol Setd1a
Gene Name SET domain containing 1A, transcript variant X3
Entrez Gene ID 101709197

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SETD1A ENSCPOG00000025456 (Guinea pig)

Gene Details

SET domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014263, Guinea pig)

Protein Percentage 94.6%
CDS Percentage 91.43%
Ka/Ks Ratio 0.0995 (Ka = 0.0285, Ks = 0.2862)

SETD1A ENSG00000099381 (Human)

Gene Details

SET domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000262519, Human)

Protein Percentage 91.98%
CDS Percentage 88.35%
Ka/Ks Ratio 0.09528 (Ka = 0.0436, Ks = 0.4573)

Setd1a ENSMUSG00000042308 (Mouse)

Gene Details

SET domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047672, Mouse)

Protein Percentage 90.49%
CDS Percentage 85.43%
Ka/Ks Ratio 0.0888 (Ka = 0.0524, Ks = 0.5902)

RGD1311624 ENSRNOG00000019045 (Rat)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025773, Rat)

Protein Percentage 87.25%
CDS Percentage 82.57%
Ka/Ks Ratio 0.09053 (Ka = 0.0716, Ks = 0.7912)

Genome Location

Sequence Coding sequence

Length: 5097 bp    Location: 14030926..14053679   Strand: +
>XM_004856213.1
ATGGATCAGGAAGGTGGGGGAGATGGGCAGAAAGCCCCAAGCTTCCAGTGGCGGAACTACAAGCTCATCGTGGATCCTGCCTTGGACCCTGCCTTGCGCAGGCCTTCTCAGAAGGTGTACCGTTATGACGGAGTCCACTTCAGTGTCAACGACTCAAAGTACATACCGGTGGAAGACCTCCAAGACCCCCGTTGCCATGTCAGGTCCAAAAACAGAGACTTTTCCCTTCCAGTCCCTAAGTTTAAGCTGGATGAGTTCTACATTGGGCAGATCCCACTGAAGGAAGTGACTTTTGCAAGGCTGAACGACAACGTGCGGGAAACCTTCCTGAAGGACATGTGCCGAAAGTATGGCGAGGTGGAAGAGGTAGAGATCCTTCTTCACCCCCGTACTCGCAAGCACCTGGGCCTGGCCCGTGTGCTCTTCACCAGCACTCGGGGTGCCAAGGAAACAGTCAAAAACCTCCACCTTACCTCCGTCATGGGCAACATCATCCATGCCCAGCTTGACATCAAAGGACAACAGCGAATGAAGTACTATGAGTTGATTGTCAATGGTTCCTACACCCCTCAGACTGTGCCCACGGGGGGCAAGGCGCTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGCCACTGAGACGACTGAATCCCGCCGCCGCTCATGCTCTGACACAGCTGCCTACCCATCAGGCACTGCTGTGGTGGGCACCCCTGGCAATGGTACCCCCTGCTCCCAGGATGCAAGTTTTTCCAGCAGCCGACAAGATACCCCCACTTCCTTTGGCCAGTTCACCCCTCAGTCCTCCCAAGGAACCCCCTACACACCTCGGGGCAGCACCCCTTACTCTCAGGACTCCGCCTACTCCAGCAGCAGCACTTCAGCCTCCTTCAAGCCCCGGCGGTCAGAAAACAGCTACCAAGATTCCTTTTCCCGCCGCCATTTCTCAGCGTCCGCAGCCCCCACGACTGCCTCCACAGCCATCTCTGCCACCACTGCAGCCACTGCCGTGTCCTCCTCTTCCTCCTCCTCATCCTCTTCGTCATCGTCCTCTTCCTCGTCCTCTCAGTTTCGTGGTTCGGATTCAAACTACCCAGCATATTATGAAAGCTGGAATCGCTACCAGCGTCATACTTCCTATCCTCCACGCCGGGCAGCTCGAGAGGAGCCCTCTGGTGCCCCTTTTTCTGAAAGTACTGCTGAACGCTTCCCACCCTCCTACACCTCGTACTTGCCCCCTGAGCCCAGCCGGCCCGCTGACCAAGACTACCGGCCTCCTGCCTCAGAGGCCCCACCCCCGGAGCCCCCTGAACCAGGTGGAGCTGGGGGTGGTGGAGGACCCAGCCCTGAGAGAGAAGAAGCTCGGACCTCCCCTCGCCCAGCCTCCCCTGCCCGCTCTGGCTCCCCGGTTCCAGAGACCACCAATGAGAGTGTGCCCTTCGCCCAGCACAGCAGCCTGGATTCCCGCATTGAAATGCTGCTGAAGGAACAGCGCTCCAAGTTTTCTTTCCTGGCCTCTGACACGGAGGAGGAGGAAGAGAACAGCAGTGCTGGCCCAGGGGCCCGAGACCCTGGGAGTGAGGTGCCTTCTGGGTCAGGTCATGGGCCTTGCACGCCTCCTCCAGCCCCAGCTAATTTTGAGGATGTGGTACCTACAGGGAATGGGGAGCCAGGGGCCACCCGGGAGTCTCCCAAGGCCAATGGACAGAACCAGGCTTCTCCATGCTCTTCTGGAGAGGACATGGAGATCTCCGATGATGACAGGGGTGGCTCGCCCCCTCCAGCCCCCGCCCCCCCCCAACAGCCCCCGCCCCCACCTTACCTGGCCTCCCTTCCCCTTGGTTACCCTCCCCACCAACCTGCCTACCTCCTCCCGCCCCGCCCAGACGGGCCCCCGCCCCCTGAGTACCCCCCACCCCCCCACATCTATGACTTTGTGAACTCCTTGGAGCTTATGGATCGACTTGGGGCTCAGTGGGGAGGGATGCCCATGTCCTTCCAGATGCAGACCCAGATGTTAACGCGGCTCCACCAGCTGCGGCAGGGCAAGGGATTGACTGCAGCCTCAGCTGGTCCTCCTGGTGGGGCTTTTGGGGAAGCGTTCCTGCCTTTCCCACCTCCTCAAGAGGCAGCCTATGGTTTGCCCTATGCTTTGTATACACAAGGGCAAGAAGGCCGGGCGGCATACTCCCGGGAGGCCTACCACCTGCCTTTGCCCATGGCAGCTGAGCCCCTGCCCTCCTCCTCAGTCTCAGGAGAAGAGGCCCGGCTGCCTCCCAGGGAGGAAGCTGAGCTGGCAGAAGGCAAGGCCCTGCCATCAGCAGGCACTGTGGGCTGTGTGCTGGCCACCCTCGTCCAGGAGATGAAGAGCATCATGCAGCGAGACCTCAACCGCAAGATGGTGGAGAATGTGGCCTTTGGGGCCTTTGATCAGTGGTGGGAAAGCAAGGAGGAGAAGGCCAAGCCATTCCAAAATGCAGCCAAACAGCAAGCCAAGGAGGAGGAAAAAGAGAAGACAAAGCTGAAAGAACCTGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGGGGTACCACAGGCATCGAGGCCTTCACCTTTGGGTCAGGGCTGCGAGGGGCCCTGCGGCTGCCTTCATTTAAGGTAAAACGGAAAGAACCCTCAGAAATTTCAGAGGCCAGTGAAGAAAAGAGGCCCCGGCCCTCCACTCCAGCTGAAGAAGATGAAGATGATTCCGAACGAGACAAGGAGGTTGGAGAGCCAGGACGTCCGGGGACCAAGCCCCCAAAGCGAGATGAAGATCGAGGAAAGACCCAGGGCAAGCACCGTAAGTCCTTTGCTTTGGACAGCGAAGGGGAAGAGGCATCCCAGGAGTCCTCCTCCGACAAGGATGAGGATGATGATGAGGAAGATGAGGAAGATGAAGAGCAAGAGGAAGCTGTGGATACCACTAAGAAGGAGACAGCAGTGTCAGATGGGGAGGATGAGGAAAGCGATTCGTCGTCCAAATGTTCTCTGTATGCCGACTCAGATGGTGAAAATGGCAGCACGTCGGACTCTGAGAGCAGCACCTCATCTTCCTCATCATCTTCATCATCCTCTTCATCATCGGAGTCCTCCTCTGAAGAGGAAGAGGAAGAGGAGCAGGCAGCAGCCATTCCCTCAGCCTCACCACCCCCCAGGGATGTCCCAGAGCCCCTCCCGGCACCTGTCGAGGAGCCAGAGCCAGAGGGGGCAGCCGGCTCCCCCGTGGCACCTCTTCCTGAGCAGGAGAAGTCTCCATCGAGGCCTGCAGGCCCCACCGAGGAACCCACCCGCAGTGTGCCCCAGCTGCCCCCAGAGCCACTCGCCGGGCCCCCCGCCCCTCCACCCTGCCTGGATGAACGCCCCTCTTCTCCTATCCCCCTTCTGCCTCCACCCAAGAAGCGTCGGAAGACCGTGTCCTTCTCTGCCATGGAGGAGGTGCGGGCCCCAGAGCCGCCCCTGGCCGCCCTCCCACAGGCCAAGCCCCCCGGCGCGGTGTCTCGGAAAGGCCCCCGGGGTGCCGAGAGGACCATTCGAAACCTGCCCCTGGACCACGCGTCTCTGGTGAGGAGCTGGCCCGAGGAGGTGTCCCGAGGAGGCCGCAGCCGCGCTGGGGGCCGAGGCCGCCCCGCTGAGGAGGAAGAGGTGGAGCCCGGCACAGACGTGGACCTGGCTGTGCTGGCTGACCTGGCCCTGGCCCCAGCCCTGGCCCTAGCCCAGCGCTCACTGGCCGCCCTGCCCCCTGGTGACGACTCGGAGGCCACGGAGACCTCGGATGAAGCTGATCGCCTGGGGCCCCCGCTCAGCCACATCTTCCTGGAGCACAACTACGCCCTGGCTGTCAAGCCCACACCCTCCACCCCGGCCCCGAGGCCCCCGGAGCCCGTCCCAGCCCCTGCCGCCCTCTTCAGCTCCCCGGCAGATGAGGTCCTGGAGGCCCCTGAGGTGGTGGTGGCTGAAGCAGAGGAGCCAAAGCCACAGCAGCAAGTGCAGGTGCAGCAGGAGGAGGGGGAGGAAGAGGAGGAGGAAGAGGAGGAGTCCGAGTCCTCGGAGAGCAGCAGCAGCAGCAGCAGCAGCGATGGGGCCAGGGCTGGGGCCGGGGCTGGGGCTGGGGCTGGGGGTGGCCAGAGGCGCAGCCTTCGCTCCCATGCCCGGCGCTGGCGGCCAGTGCTCCCACCGCCACCGCCGCCACCCTCCTTCGAGCCCCGAAGCGAGTTTGAGCAGATGACCATCCTATATGACATTTGGAACTCGGGCCTGGACTTGGAAGACATGAGCTACCTGCGGCTCACGTACGAGCGGCTGCTGCAGCAGACCAGTGGGGCCGACTGGCTTAATGACACCCACTGGGTCCACCATACAATCACCAACCTGAGCACTCCAAAGCGCAAGCGGCGGCCCCAGGATGGGCCCCGAGAGCACCAGACAGGCTCCGCGCGCAGTGAAGGTTATTACCCCATCAGCAAGAAGGAGAAGGACAAGTACCTGGATGTGTGCCCTGTCTCAGCCCGGCAGCTGGAAGGAGTGGACACTCAGGGGACGAATCGTGTGCTTTCTGAGCGCCGGTCTGAGCAGCGGCGGCTGCTGAGTGCCATTGGCACCTCAGCCATCGTGGACAGTGACCTGCTGAAGCTGAACCAGCTCAAGTTCCGGAAGAAGAAGCTCCGATTTGGCCGGAGCCGGATCCACGAATGGGGTCTGTTTGCCATGGAGCCCATTGCAGCTGACGAGATGGTCATCGAGTATGTGGGTCAGAACATCCGCCAGATGGTGGCCGACATGCGGGAGAAGCGCTACGTGCAGGAGGGCATCGGCAGCAGCTACCTGTTCCGGGTGGACCACGACACCATCATCGATGCCACCAAGTGTGGCAACCTGGCGAGGTTCATCAACCACTGCTGCACGCCCAACTGCTACGCCAAGGTGATCACCATCGAGTCGCAGAAGAAGATCGTGATCTACTCCAAGCAGCCCATCGGGGTGGATGAGGAGATCACCTACGACTACAAGTTCCCGCTGGAGGACAGCAAGATCCCGTGCCTGTGCGGCGCCGAGAGCTGCCGTGGCTCGCTCAACTGA

Related Sequences

XP_004856270.1 Protein

Setd1a PREDICTED: histone-lysine N-methyltransferase SETD1A isoform X3 [Heterocephalus glaber]

Length: 1698 aa      View alignments
>XP_004856270.1
MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDGVHFSVNDSKYIPVEDLQDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLNDNVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGNIIHAQLDIKGQQRMKYYELIVNGSYTPQTVPTGGKALSEKFQGSGAATETTESRRRSCSDTAAYPSGTAVVGTPGNGTPCSQDASFSSSRQDTPTSFGQFTPQSSQGTPYTPRGSTPYSQDSAYSSSSTSASFKPRRSENSYQDSFSRRHFSASAAPTTASTAISATTAATAVSSSSSSSSSSSSSSSSSSQFRGSDSNYPAYYESWNRYQRHTSYPPRRAAREEPSGAPFSESTAERFPPSYTSYLPPEPSRPADQDYRPPASEAPPPEPPEPGGAGGGGGPSPEREEARTSPRPASPARSGSPVPETTNESVPFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSAGPGARDPGSEVPSGSGHGPCTPPPAPANFEDVVPTGNGEPGATRESPKANGQNQASPCSSGEDMEISDDDRGGSPPPAPAPPQQPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPHIYDFVNSLELMDRLGAQWGGMPMSFQMQTQMLTRLHQLRQGKGLTAASAGPPGGAFGEAFLPFPPPQEAAYGLPYALYTQGQEGRAAYSREAYHLPLPMAAEPLPSSSVSGEEARLPPREEAELAEGKALPSAGTVGCVLATLVQEMKSIMQRDLNRKMVENVAFGAFDQWWESKEEKAKPFQNAAKQQAKEEEKEKTKLKEPGMLSLVDWAKSGGTTGIEAFTFGSGLRGALRLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDSERDKEVGEPGRPGTKPPKRDEDRGKTQGKHRKSFALDSEGEEASQESSSDKDEDDDEEDEEDEEQEEAVDTTKKETAVSDGEDEESDSSSKCSLYADSDGENGSTSDSESSTSSSSSSSSSSSSSESSSEEEEEEEQAAAIPSASPPPRDVPEPLPAPVEEPEPEGAAGSPVAPLPEQEKSPSRPAGPTEEPTRSVPQLPPEPLAGPPAPPPCLDERPSSPIPLLPPPKKRRKTVSFSAMEEVRAPEPPLAALPQAKPPGAVSRKGPRGAERTIRNLPLDHASLVRSWPEEVSRGGRSRAGGRGRPAEEEEVEPGTDVDLAVLADLALAPALALAQRSLAALPPGDDSEATETSDEADRLGPPLSHIFLEHNYALAVKPTPSTPAPRPPEPVPAPAALFSSPADEVLEAPEVVVAEAEEPKPQQQVQVQQEEGEEEEEEEEESESSESSSSSSSSDGARAGAGAGAGAGGGQRRSLRSHARRWRPVLPPPPPPPSFEPRSEFEQMTILYDIWNSGLDLEDMSYLRLTYERLLQQTSGADWLNDTHWVHHTITNLSTPKRKRRPQDGPREHQTGSARSEGYYPISKKEKDKYLDVCPVSARQLEGVDTQGTNRVLSERRSEQRRLLSAIGTSAIVDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEEITYDYKFPLEDSKIPCLCGAESCRGSLN