Details from NCBI annotation

Gene Symbol Stx1b
Gene Name syntaxin 1B, transcript variant X7
Entrez Gene ID 101707042

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STX1B ENSCPOG00000002103 (Guinea pig)

Gene Details

syntaxin 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001905, Guinea pig)

Protein Percentage 62.69%
CDS Percentage 64.87%
Ka/Ks Ratio 0.02577 (Ka = 0.3257, Ks = 12.6398)

STX1B ENSG00000099365 (Human)

Gene Details

syntaxin 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000215095, Human)

Protein Percentage 62.69%
CDS Percentage 64.49%
Ka/Ks Ratio 0.02451 (Ka = 0.3245, Ks = 13.2385)

Stx1b ENSMUSG00000030806 (Mouse)

Gene Details

syntaxin 1B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101874, Mouse)

Protein Percentage 62.69%
CDS Percentage 62.44%
Ka/Ks Ratio 0.02156 (Ka = 0.3286, Ks = 15.2414)

Stx1b ENSRNOG00000019193 (Rat)

Gene Details

syntaxin 1B (Stx1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026063, Rat)

Protein Percentage 62.69%
CDS Percentage 63.08%
Ka/Ks Ratio 0.02288 (Ka = 0.3287, Ks = 14.3645)

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location: 14073557..14061834   Strand: -
>XM_004856209.1
ATGGATGAGTTCTTTGAACAGGTAGAAGAGATCCGAGGCTGCATTGAGAAACTGTCGGAAGATGTGGAGCAGGTGAAAAAGCAGCACAGTGCCATCCTGGCCGCCCCCAACCCGGATGAGAGTGCGTCCCGATGCTGGGCTGCTGGGGGCCGGGGGGCTGGGGTCCCACCCTGGCTCCTCACTCCTGCCCTCCCCACCGCAGAGACCAAGCAGGAGCTGGAGGACCTCACCGCCGACATCAAGAAGACAGCCAACAAGGTGCGGTCCAAGTTGAAAGCGATCGAGCAGAGCATTGAACAGGAGGAGGGGCTGAACCGGTCCTCGGCAGACCTGCGCATCCGAAAGACCCAGGTTGGGGGCCAGGCCTGGGGTGGGGGCTGTGTGTGGGCTGAGGCCCCTCGGGTGGGCCTGAGCCTTCTGGGAGGAGGGTGCAGGCCACACTGGAGGAAGGGCTGTAAACTAACGAGCTGTGCTGTTCCCGCCACACTCCCGCTCCTACCCCAGCACTCCACGCTCTCCCGGAAGTTTGTGGAGGTGATGACGGAGTATAATGCCACGCAGTCCAAGTACCGGGACCGCTGCAAGGACCGGATCCAGCGGCAGCTGGAGATCACCGGCAGGACCACGACCAACGAGGAGCTGGAGGACATGCTGGAGAGCGGGAAGCTGGCCATCTTCACCGACGACGTGAGCCCGGGGCAGGGCTGGCAGAGGGGCATCGCCCTCCTCCCCAAGCCCAGGTTGAGCAGTGGGCAGCCGGACTGGGGCCCGGGGAGTTCCACGGAGCAGGGCAGGAAGGCCGCCTGGATAGGTGCCACACAGCGCCCGACAGCGCCGGCCATGTCGGCCTCTGCAGCCCGAGGGGAGGCTGCTTCACAGAGGGGAAGCCTCGGGCCTCTGGGCAGGGCAGGCTCTGAATCCTGTTCTAGCGTCAGACTCCGCAGGCCTGAGACCCAGCCTGCCCACCCCCTTCCGGGAATCCCAGCATACCCCACGAGACTCATTTGTCTGCATTTCGGAGTTTTTTTGAAAAATCAGTTTTACTTTTGCTTAAGTTTTACACACTGCACTTGTTTACCTGTGGGTGAGTGGACTTTGCCCTGA

Related Sequences

XP_004856266.1 Protein

Stx1b PREDICTED: syntaxin-1B isoform X7 [Heterocephalus glaber]

Length: 367 aa      View alignments
>XP_004856266.1
MDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAILAAPNPDESASRCWAAGGRGAGVPPWLLTPALPTAETKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQVGGQAWGGGCVWAEAPRVGLSLLGGGCRPHWRKGCKLTSCAVPATLPLLPQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDVSPGQGWQRGIALLPKPRLSSGQPDWGPGSSTEQGRKAAWIGATQRPTAPAMSASAARGEAASQRGSLGPLGRAGSESCSSVRLRRPETQPAHPLPGIPAYPTRLICLHFGVFLKNQFYFCLSFTHCTCLPVGEWTLP