Details from NCBI annotation

Gene Symbol Ctf1
Gene Name cardiotrophin 1, transcript variant X2
Entrez Gene ID 101703771

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTF1 ENSG00000150281 (Human)

Gene Details

cardiotrophin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000279804, Human)

Protein Percentage 83.67%
CDS Percentage 88.61%
Ka/Ks Ratio 0.24614 (Ka = 0.0851, Ks = 0.3456)

Ctf1 ENSMUSG00000042340 (Mouse)

Gene Details

cardiotrophin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049161, Mouse)

Protein Percentage 76.53%
CDS Percentage 81.8%
Ka/Ks Ratio 0.20725 (Ka = 0.1357, Ks = 0.6547)

Ctf1 ENSRNOG00000018962 (Rat)

Gene Details

cardiotrophin 1 (Ctf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025646, Rat)

Protein Percentage 77.04%
CDS Percentage 81.12%
Ka/Ks Ratio 0.20324 (Ka = 0.1353, Ks = 0.6659)

Genome Location

Sequence Coding sequence

Length: 591 bp    Location: 13976314..13979393   Strand: +
>XM_004856194.1
ATGAGCCTGAGGGAGGGAAGTCTGGACCCCCAGGCTGACTCCTCAGTCTCATTCCTTCCCCACTTGGAGGCCAAGATCCGCCAGACACACAGCCTTGCCCGCCTCCTCACCAAATATGCTGAGCAGCTGCTCCAGGAATATGTGCAGCACCAGGGAGCCCCCTTCGGCTCGCCCGGCTTCTCGCCGCCGCGGCTGCCGGTGGCCGGCCTGAGCGCGCCGGCGCCGGGCCACGCGGGGCTGCCGCTGGCCGAGCGGCTGCGCTTGGACGCCGAGGCGCTGGCCGAGCTGCCCCCGCTGTTGGATGCCGTGCGCCACCGCCAGGCCGAGCTGAGCCCGCGCGCGCTGCGCCTGCTGCGGCGCCTGGAGGACGCGACGCGCCAGACCCGCGCGCTGGGTGCCGCCCTGGAGGCCGTGCTGGCCGCGCTGGGCGCCGCCGCCCCGGGGCCCCGCCGCGAGCCCCCGGCCGCCCCCGGCCCCGCGGGCGTCTTCCCAGCCAAGCTGCTGGGGCTGCGCGTGTGCGGCCTCTACCGCGAGTGGACGCGCCGCACCGAGGGAGACCTGGGCCAGCTGCTGCCCGGGGGCCCCGCCTGA

Related Sequences

XP_004856251.1 Protein

Ctf1 PREDICTED: cardiotrophin-1 isoform X2 [Heterocephalus glaber]

Length: 196 aa     
>XP_004856251.1
MSLREGSLDPQADSSVSFLPHLEAKIRQTHSLARLLTKYAEQLLQEYVQHQGAPFGSPGFSPPRLPVAGLSAPAPGHAGLPLAERLRLDAEALAELPPLLDAVRHRQAELSPRALRLLRRLEDATRQTRALGAALEAVLAALGAAAPGPRREPPAAPGPAGVFPAKLLGLRVCGLYREWTRRTEGDLGQLLPGGPA