Sequence details NCBI ID: XM_004856067.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc101
Gene Name coiled-coil domain containing 101, transcript variant X1
Entrez Gene ID 101725712

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000027037 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018704, Guinea pig)

Protein Percentage 99.32%
CDS Percentage 94.2%
Ka/Ks Ratio 0.0111 (Ka = 0.0031, Ks = 0.2754)

Ccdc101 ENSMUSG00000030714 (Mouse)

Gene Details

coiled-coil domain containing 101

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032956, Mouse)

Protein Percentage 98.98%
CDS Percentage 89.87%
Ka/Ks Ratio 0.0068 (Ka = 0.0044, Ks = 0.6512)

CCDC101 ENSRNOG00000019245 (Rat)

Gene Details

SAGA-associated factor 29 homolog

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026146, Rat)

Protein Percentage 99.32%
CDS Percentage 89.31%
Ka/Ks Ratio 0.004 (Ka = 0.0029, Ks = 0.734)

Genome Location

Sequence Coding sequence

Length: 882 bp    Location: 13054671..13072518   Strand: +
Raw sequence   
>XM_004856067.1
ATGGCCCTGGTGTCTGCTGACTCCCGCATCGCAGAACTCCTCACGGAGCTCCATCAGCTGATCAAACAAACCCAGGAGGAGCGTTCACGGAGCGAGCACAATTTAGTGAACATCCAGAAGACCCACGAGCGGATGCAGACAGAGAACAAAATTTCTCCTTATTTCCGGACAAAGCTGCGCGGCCTGTACACAACTGCCAAGGCTGATGCAGAGGCCGAGTGCAACATCCTCAGGAAGGCCCTGGATAAGATCGCCGAGATCAAGTCTCTCTTGGAAGAGAGGAGGATTGCGGCCAAGATCGCAGGCCTGTACAATGACTCGGAGCCCCCTCGGAAGACCATGCGGAGAGGGGTGCTCATGACGCTGCTGCAGCAGTCGGCCATGACCCTGCCCCTGTGGATTGGGAAGCCTGGTGACAAGCCCCCACCTCTCTGTGGGGCCATTCCAGCGTCAGGGGACTACGTGGCCAAACCTGGGGACAAGGTTGCTGCACGGGTGAAGGCCGTGGATGGGGACGAGCAGTGGATCCTGGCTGAGGTGGTCAGTTACAGCCACGCCACCAACAAGTATGAAGTAGATGACATCGATGAAGAAGGCAAAGAGAGACACACCCTCAGCCGCCGGCGGATCATCCCGCTGCCCCAGTGGAAGGCCAACCCTGAGACAGACCCAGAGGCCTTGTTTCAGAAGGAGCAGCTTGTGCTGGCCCTGTATCCACAGACCACCTGCTTCTACCGGGCCCTGATCCACACGCCCCCGCAGCGGCCCCAGGATGACTACTCCGTCCTGTTTGAAGACACCTCCTATGCGGATGGCTACTCCCCTCCTCTCAACGTGGCCCAGAGGTACGTTGTGGCTTGTAAGGAGCCGAAGAAAAAGTGA

Related Sequences

XP_004856124.1 Protein

Ccdc101 PREDICTED: SAGA-associated factor 29 homolog isoform X1 [Heterocephalus glaber]

Length: 293 aa      
>XP_004856124.1
MALVSADSRIAELLTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYFRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVAKPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHTPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKEPKKK