Sequence details NCBI ID: XM_004856033.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sh2b1
Gene Name SH2B adaptor protein 1, transcript variant X4
Entrez Gene ID 101715023

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SH2B1 ENSCPOG00000008333 (Guinea pig)

Gene Details

SH2B adaptor protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007490, Guinea pig)

Protein Percentage 90.8%
CDS Percentage 87.88%
Ka/Ks Ratio 0.17119 (Ka = 0.0624, Ks = 0.3643)

SH2B1 ENSG00000178188 (Human)

Gene Details

SH2B adaptor protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000321221, Human)

Protein Percentage 90.64%
CDS Percentage 85.69%
Ka/Ks Ratio 0.11182 (Ka = 0.061, Ks = 0.5454)

Sh2b1 ENSMUSG00000030733 (Mouse)

Gene Details

SH2B adaptor protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032978, Mouse)

Protein Percentage 90.0%
CDS Percentage 83.28%
Ka/Ks Ratio 0.08723 (Ka = 0.0611, Ks = 0.7009)

Sh2b1 ENSRNOG00000049181 (Rat)

Gene Details

SH2B adaptor protein 1 (Sh2b1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066048, Rat)

Protein Percentage 88.67%
CDS Percentage 82.8%
Ka/Ks Ratio 0.11015 (Ka = 0.0734, Ks = 0.6665)

Genome Location

Sequence Coding sequence

Length: 2445 bp    Location: 12896887..12889472   Strand: -
Raw sequence   
>XM_004856033.1
ATGCAGGTGGGACCGGAACCGGAACCCCCCTCTTCAAGTGCCTCTTCCCTCTCCGCGACCCGGCCCGGCGCCTGCGAGGAGCCCCGGGTGGGGGTGGGGGTGGGCGTGGGGCCCCCGAGCAGGAGGGGCACTTGGCCCTGCAGAGTGCGGCGGACAGGGCTGGTCCCCAGGAGACTGCAGCCCCGGGAGTGGGCGCGTGGGGGGTGTCCCGCAAGTAGGGTCGGGTCGGAGTGGCTTGACCACGGGCCCAGAGGGTCCGAGCCAGGAGAGGAGCCTGCACCCTCCACCACCTGCCCTTCGGGAAATGTCAGAACCGAGCCAAGAGGCAGGTGCACCGGGAAAATGTATCTGAGCAGAAGAGAAACTGAGTCACCACCTCAGGAGCTGCAGGCTGCTGCCACTCACCCCGTGTCTTCTGGCCGCTTCCCTCTTTGCTGCCCCTCCCCACAGGCTCTCCCTCTCCACCTCCTGGGGCCCATCATGAATGGTACCCCTTCCCCAGAGGATGGGGCCTCCCCCTCCCCCCCTCCCCCGAGTTGGCGGGAGTTCTGCGAGTCCCATGCCAGGGCTGCTGCCCTGGATTTCGCCCGTCGTTTTCGCCTCTACCTGGCCTCCCACCCCCAGTACGCAGGGCCTGGGGCTGAGGCTGCCTTCTCCCGCCGGTTTGCTGAGCTCTTCCTGCAGCACTTTGAAGCTGAGGTGGCCCGGGCCTCTGGCTCCCTCTCACCGACATCCATCTTGGCTCCCCTGAGTCCTGGTGTGGAGGTCCTGCCACCTCATGACCTGGCCCTTGAGAGCTGCAGGGTGGGAGGGCCTCTGGCTGTGCTGGGCCCTTCTCCATCCTCTGAGGACCTGGCCGGCCCCCTGCCATCCTCCGTCTCTTCCTCAACGACCTCCTCGAAGCCGAAGCTCAAGAAACGCTTTTCCCTCCGCTCAGTGGGTCGCTCTGTCCGAGGTTCAGTGCGAGGCATCCTGCAGTGGCGGGGGGCTGTCGACCCTCCATCCCCAGCTGGGCCCCTGGAGACCTCTTCAGCCCCCCCAGTCCTAGGTGGAAACAGCAACTCCAACTCCTCTGGTGGAGCTGGGACTCTTGGTAGGGGACTGGTCAGTGACGGCACGTCCCCCGGGGAGCGATGGACTCACCGATTTGAGAGGCTGAGACTAAGTCGGGGTGGGGGGACCTTGAAGGACGGATCAGGGATGGTGCAGAGGGAGGAGCTGCTGAGTTTTATGGGGGCCGAAGAGGCTGCCCCTGACCCAGCTGGAGTGGGCCGGGGAGGAGGGCAGTCTCAGTGGCAGAAGTGTCGCTTACTGCTGCGAAGTGAGGGAGAAGGAGGAGGAGGAAGCCGCCTGGAGTTCTTCGTGCCACCCAAGGCGTCCCGGCCCCGGCTCAGCATCCCCTGCTCCGCTATCATGGATGTTCGGACAACCACAGCCCTGGAGATGCCGGACCGGGAGAACACGTTTGTGGTTAAGGTGGAAGGCCCCTCGGAGTACATCCTGGAGACAGCTGACGCTGCCCACGTGAAGGCCTGGGTGTCCGACATCCAAGAGTGCCTGAGCCCAGGACCCTGCCCCGCTACCAGCCCCCGCCCCATGACCCTCCCTCTGGCCCCCAGCACCTCCTTCCTCACAAAGGAGAACACGGACAGCCTGGAGCCCCCTTGCCTGAATCACTCGGAGAGTCTGCCGAGTCAGGACCTGCTACTGGGGCCCAGCGAGAGCAACGACCGCCTGTCCCAGGGGGCGTATGGGGGCCTGTCCGAGCGGCCCTCTGCATCCATTTCCCCCAGCTCGGCCTCCATCGCAGCCTCCCATTTCGACTCAATGGAACTGCTTCCCCCAGAGCTGCCCCCCCGAATCCCCATTGAGGAGGGCCCCCCGGCAGGCACAGTTCATCCTCTCTCGACCCCCTATCCTCCTCTGGACACCCCGGAGACAGCCACAGGGTCCTTCCTGTTCCAGGAGTCGGAAGGCGGGGAGGGGGACCAGCCCCTCTCGGGGTACCCGTGGTTCCACGGCATGTTGTCTCGACTCAAGGCCGCCCAGTTAGTGCTGGAAGGAGGCACCAGCTCCCACGGGGTCTTCCTGGTTCGGCAGAGCGAGACGAGGAGGGGCGAATATGTCCTCACTTTCAATTTCCAGGGCAAGGCCAAGCACCTGCGCTTGTCACTGAACGAGGAGGGTCAGTGCCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTTGATATGCTCGAGCATTTCCGGGTGCACCCCATCCCTCTGGAGTCTGGAGGCTCCAGTGACGTTGTCCTTGTCAGCTATGTGCCCTCCCAGCGGCAGCAGGGCTGGGAGCAGGCTGGGAGCCATGCAGGGGTGTGCGAGGGAGATCGATGCTACCCCGATGCCTCCTCCACCCTCGTGCCCTGCGGAGCGAGTGACTGTGTAATCGAACACCTTCCATGA

Related Sequences

XP_004856090.1 Protein

Sh2b1 PREDICTED: SH2B adapter protein 1 isoform X4 [Heterocephalus glaber]

Length: 814 aa      View alignments
>XP_004856090.1
MQVGPEPEPPSSSASSLSATRPGACEEPRVGVGVGVGPPSRRGTWPCRVRRTGLVPRRLQPREWARGGCPASRVGSEWLDHGPRGSEPGEEPAPSTTCPSGNVRTEPRGRCTGKMYLSRRETESPPQELQAAATHPVSSGRFPLCCPSPQALPLHLLGPIMNGTPSPEDGASPSPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEAAFSRRFAELFLQHFEAEVARASGSLSPTSILAPLSPGVEVLPPHDLALESCRVGGPLAVLGPSPSSEDLAGPLPSSVSSSTTSSKPKLKKRFSLRSVGRSVRGSVRGILQWRGAVDPPSPAGPLETSSAPPVLGGNSNSNSSGGAGTLGRGLVSDGTSPGERWTHRFERLRLSRGGGTLKDGSGMVQREELLSFMGAEEAAPDPAGVGRGGGQSQWQKCRLLLRSEGEGGGGSRLEFFVPPKASRPRLSIPCSAIMDVRTTTALEMPDRENTFVVKVEGPSEYILETADAAHVKAWVSDIQECLSPGPCPATSPRPMTLPLAPSTSFLTKENTDSLEPPCLNHSESLPSQDLLLGPSESNDRLSQGAYGGLSERPSASISPSSASIAASHFDSMELLPPELPPRIPIEEGPPAGTVHPLSTPYPPLDTPETATGSFLFQESEGGEGDQPLSGYPWFHGMLSRLKAAQLVLEGGTSSHGVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHLWFQSIFDMLEHFRVHPIPLESGGSSDVVLVSYVPSQRQQGWEQAGSHAGVCEGDRCYPDASSTLVPCGASDCVIEHLP