Details from NCBI annotation

Gene Symbol Lat
Gene Name linker for activation of T cells, transcript variant X5
Entrez Gene ID 101711455

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAT ENSCPOG00000023304 (Guinea pig)

Gene Details

linker for activation of T cells

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018522, Guinea pig)

Protein Percentage 77.16%
CDS Percentage 83.76%
Ka/Ks Ratio 0.2901 (Ka = 0.1287, Ks = 0.4438)

LAT ENSG00000213658 (Human)

Gene Details

linker for activation of T cells

External Links

Gene Match (Ensembl Protein ID: ENSP00000378845, Human)

Protein Percentage 68.72%
CDS Percentage 76.21%
Ka/Ks Ratio 0.26523 (Ka = 0.2045, Ks = 0.771)

Lat ENSMUSG00000030742 (Mouse)

Gene Details

linker for activation of T cells

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032997, Mouse)

Protein Percentage 64.07%
CDS Percentage 73.45%
Ka/Ks Ratio 0.29739 (Ka = 0.2547, Ks = 0.8566)

Lat ENSRNOG00000017429 (Rat)

Gene Details

linker for activation of T cells (Lat), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023563, Rat)

Protein Percentage 66.23%
CDS Percentage 75.18%
Ka/Ks Ratio 0.33224 (Ka = 0.2429, Ks = 0.731)

Genome Location

Sequence Coding sequence

Length: 720 bp    Location: 12799410..12795104   Strand: -
>XM_004856021.1
ATGGAGGTGAGCAGCCTGGTCCTCACTGAGCCCCTGGGCCTCCTGCTGCTGCCCCTCGTCGCCATGCTGCTGATGGCCCTGTGTGTGCGCTGCCGAGAGTTGCCAGCCTCCTGTGGCGGTGCTGACGAGGACCGTTCACACACAGAGAGCATCCTGTTCAAGCCGCCCCAAGCGCCGGCCCCCTGGCCTGCTGCCTACCCACCCCCGAGCCAGGTGGACCTGCTGCACATCCCAAGGTCCCCACAGCCCCTCGGGGGTTCCCACCGGATGCTGTCTTCACGGCAGGACTCAGAAGGGGCCAACAGTGTGGCGAGCTATGAGAACCAAGAGCCAGCCTGTGAGGATGCAGATGAAGACGACCTGGAGGAGGAGGAGGACTATCCCAACGAGGGCTACGGGGGCTACGTGGAGGTGCTGCCCGACAGCGCCCCAGCCAGCGGTGCTGCTGACCCAGCGGAGGCTCCGGTGCCCAGCAACCCCGGCGCCCGAGGCAGTGCCTTCTCCATGGAGTTCCGAGAAGACTACGTGAATGTCCCCGAGAGCGAGGAGAGCGCGGAAGTATCTCTGGATGGGAGCCGGGAGTATGTGAACGTATCCCAGGAGTTGCAGCCGGGGGCCAGGACGGAGCCTGCCGCCCTGAGCTCCCGGGATGTGGAGGATGAGGACGAGGACGAGGATGAAGAGACCCCGGATTATGAGAACCTGCAGGAACTGAGTTGA

Related Sequences

XP_004856078.1 Protein

Lat PREDICTED: linker for activation of T-cells family member 1 isoform X5 [Heterocephalus glaber]

Length: 239 aa      View alignments
>XP_004856078.1
MEVSSLVLTEPLGLLLLPLVAMLLMALCVRCRELPASCGGADEDRSHTESILFKPPQAPAPWPAAYPPPSQVDLLHIPRSPQPLGGSHRMLSSRQDSEGANSVASYENQEPACEDADEDDLEEEEDYPNEGYGGYVEVLPDSAPASGAADPAEAPVPSNPGARGSAFSMEFREDYVNVPESEESAEVSLDGSREYVNVSQELQPGARTEPAALSSRDVEDEDEDEDEETPDYENLQELS