Details from NCBI annotation

Gene Symbol Gtf3c1
Gene Name general transcription factor IIIC, polypeptide 1, alpha 220kDa
Entrez Gene ID 101705327

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF3C1 ENSCPOG00000025753 (Guinea pig)

Gene Details

general transcription factor IIIC, polypeptide 1, alpha 220kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021039, Guinea pig)

Protein Percentage 86.07%
CDS Percentage 87.34%
Ka/Ks Ratio 0.16703 (Ka = 0.0747, Ks = 0.4475)

GTF3C1 ENSG00000077235 (Human)

Gene Details

general transcription factor IIIC, polypeptide 1, alpha 220kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000348510, Human)

Protein Percentage 79.89%
CDS Percentage 81.76%
Ka/Ks Ratio 0.15012 (Ka = 0.1144, Ks = 0.7621)

Gtf3c1 ENSMUSG00000032777 (Mouse)

Gene Details

general transcription factor III C 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056719, Mouse)

Protein Percentage 78.49%
CDS Percentage 78.73%
Ka/Ks Ratio 0.1249 (Ka = 0.1278, Ks = 1.0231)

Gtf3c1 ENSRNOG00000016218 (Rat)

Gene Details

general transcription factor IIIC, polypeptide 1, alpha (Gtf3c1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022271, Rat)

Protein Percentage 78.43%
CDS Percentage 78.72%
Ka/Ks Ratio 0.13206 (Ka = 0.1295, Ks = 0.981)

Genome Location

Sequence Coding sequence

Length: 6246 bp    Location: 12141409..12074203   Strand: -
>XM_004855997.1
ATGGACGCGCTGGAGTCGTTGTTGGACGAAGTGGCCTTGGAGGGGCTTGATGGCTTGTGTTTGCCTGCTCTGTGGAGCCGTCTGGAGTCTCGAGTGCCTCCCTTCCCGCTGCTGTTGGAGCCCTACACGCAGGAGTTTTTGTGGCGCGCTCTTGCCACGCATCCGGGCATCAGCTTCTATGAGGAGCCTCGGGAGCGCCCCGACCTCCAGCTGCAGGACCGGTATGAAGAAATTGACTTGGAAACTGGAATATTGGAGTCCCGGAGGGACCCGGTCTCTTTGGAGGATGTCTACCCCATTCATATGATCTTAGAGAATAAGGATGGCATCCAGGGCTCGTGCCAGTTCTTTAAGGAGAGGAAGAACATTACCAGTAACATCAGGAGCAAGTCTTTGCAGCCTCGTTGTACGATGATGGAGGCATTTGACAGGTGGGGCAAGAAGCTGATCATTGTCGCCTCCCAAGACATGCGCTACAGGGCGCTGATAGGCGCAGAGGGGGACCCTGACCTGAAGCTCCCCGACTTCTCCTATTGCATCTTGGAGCGACTCGGCCGGTCCAGGTGGCAAGGGGAGTTGCAGCGAGACCTTCACACCACCGCTTTCAAGGTTGACGCTGGAAAGCTTCATTATCACCGGAAGATCTTGAACAAAAACGGGCTCATTACGATGCAGTCACATGTGATCCGATTGCCCACAGGAGCCCAGCAGCACTCCATCCTCCTGCTCCTGAACCGCTTCCACGTGGACAGGAGGAGCAAATACGACATCCTCATGGAGAAGCTCTCGGGGATGCTGAGCACCCGGAGTAACCGGATCGAGACGCTGGGCAGACTGCGGGAGGAGCTGGGGCTGTGTGAGAGGACTTTTAAGCGTCTGTACCAGTACATGCTGAACGCGGGGCTGGCCAAGGTGATAACCCTCCCCTTACAAGAGATTCACCCTGAATGTGGACCCTGCAAGACCAAAAAAGGGACTGACGTCATGGTCCGGTGCCTCAAGCTGCTGAAGGAGTTCAAGAAGAAGGTGGAAGATGACCACGATGACGATGACGATGAGGAAGTCATCTCCAAGGCCGTGCTTCCCGTGGACATCGTTTACGAGCGGGATATGCTCACGCAGACCTATGACCTCATTGAGCGCAGAGGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGTGGCCATGAACGTGGGGAAGCTGGAAGCAAGAATGCTGTGCCGGCTTCTTCAAAGGTTCAAGGTTGTCAAGGGGTTCATGGAGGACGAAGGCCGGCAGCGGACCACCAAGTACATCTCATGCGTGTTCGCTGAGGAGAGCGACCTGAGCCGGCAGTACGCGCGGGAGAAGGCCCGGGGCGAGCTGCTGACCACCGTGAGCCTGGCCTCCATGTCCGAGGAGCCGCTGCTGCCTGAAGGCGAGGACGCCTTTCTCTCCGAGTCGGACAGCGAGGAGGAGGGCAGCAGGGTCAGCAAGCGCAGGGCCCGGGGAGCCCAGCCCCACGTGCGGCCGTCTGCGGAGTTCGGGCCTGGTGCGCAGCCTCAGCACTCCACCCCGACCAAGGGCGGGTGGAAACTGCTCAACCTTCACCCCTTGAAGAGGCAGCTGCCTTCCTCCCCAGGGGCTGCTGAGGAGCGAGCCTCCCGGAGCTCGGGGGCCAGGGACAACCTGGACACCAGCGGCTCCTCGGACTTCAACGTGTCCTTCGGCTCCCACTGCATGGAGAGCGCCAGTGGCGACATAGCCATGATCGAGGAGGTGCGGCTGGACAACCCCAAGGAGAGTGGCAGCTCCCAGAAGGCTGGGAAGCATAGCACAGGCCTGGAGAAGCCCCACAAGACTTACCGCCTGCTGAAACGCCGGAATCTGATCATAGAAGCTGTCACCAACCTTCGCCTGATTGAGAGCCTGTTCACGATTCAGAAGATGATCATGGATCAGGAGAAGCAGGAGGGCGTGTCTACCAAGTGCTGTAAGAAATCCATTGTGCGGCTGGTGCGGAACTTGTCTGAGGAAGGCCTCTTGCGGCTGTATCGGACCACAGTTATTCAGGATGGCATCAAGAAGAAGGTGGATCTGGTTGTGCACCCATCCATGGACCAGAACGACCCTCTTGTGAGAAGTGCCATCGAGCAGGTTCGCTTCCGGATCTCTAATTCAACCACAGCAAACAGGGGGAAGGTTCCCCAGCCTCCAGCACCTCCAGAGGAGGTAGAAGAAGAAAGTCAAGGACAAGAGGAACCAAGCAGATCGGGAGACTGTGACATGAATGCGTCCTCTAAACCAGAGAGTGGGCGGGGGAAAAAGACCGATGAGAAGATGGGCGTGACCCCGATGAAAAATTACCACCCTGTTGTAGTTCCTGGCCTTGGGCGCTCTCTCGGGTTCCTGCCCAAGATGCCTCGCCTGCGGGTGGTGCACACGTTCCTCTGGTACCTGATCTACGGGCACCCTGCCTGCTATGTAATGGAGAAGCCAGTGTTGTTTGGCAGTGAGAGGAGAGGCGGCAGGCACCCCAGAGGTGACTGGGATGCCTCGGATCTCAGGGACAATCCAGACGGTGTCACCTGGGAGACTGAGGTGGAGCTGTCCACAGAGACAGTGTACGTGGACGACGCCTCGTGGATGCGCTTCATCCCTCCCATCCCGGTCCACAGGGACTTTGGCTTTGGCTGGGCGCTCGTCAGTGACATCCTCCTCTCGCTGCCCCTCTCCATCTTCGTCCAGATTGTGCAAGTCAGCTACAAGGTGGACAACCTCGAGGAGTACCTGAACCACCCTCTGAAGCAGCACACGCTCATCCGCTTCCTCCCCAGGCCCATTCGGCAGCAGCTCCTGTACAAGAGGCGGTACATCTTCTCGGTGATGGAGAGCCTGCAGAGACTGTGCTACATGGGGCTACTGCAGTTCGGCCCCACGGAGAAGTTCCAGGACAAGGACCAGGTTTTTGTCTTCCTGAAGAAGAAGGCAGTCATCATTGATACTACCATCTGTGACCCCCATTACAACCTGGCCCACAGCAGCCGGCCCTTCGAGAGGCGGCTCTATGTGCTGAACTCCATGCAGGATGTGGAGAGCTACTGGTTCGATCTGCAGTGCGTCTGCCTCAACACCCCGCTAGGTGTGGTGCGCTGCCCAGCCGTCCCGAAGAACAGCGCCGACCACGCCAGTGACGAGGAGGGCAGCCTGCGGAAGGAGCAGGAGAAAGCCGTTGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCAGGAGTACACCACGGGCAGCCGGGAGATCATGGATGAAGGCCACATCCCTGGCGACGGGTTGGGAGCCGCTGGACTCGATTCCAGTTTCTATGCACACCTGAAACGCAACTGGATCTGGACCAGCTACATCATCAATAAAGCCAGAAAGGAGAACATCACTGCAGAGAACGGGCTCACAGTGAGGCTCCAGACGTTTCTGTCCAAGCGCCCTTTGCCACTCGGAGCTGCAGGCAGTAGTAGGCTGCCCCTCTGGGGGGAAGCGAAAGCGGGCAGTGAGCTCTCTGCCCACCGGGAGCAGTTTGGGATGGAGCGGGAGCCCACACTGGGCCGAAGCCGAAGGGTGAAGGGCGGCAGAAACCAGAAGCGGAAGCGGCTGAGGAAGGACCCTGTCAGGAGGACCAAGCGGAGGAGAAAAGAGGAGCTGCCAGGAGCCAAAATCAAAAGGCCGCGCTACCACGACGAGGCCGACCAGAGTGCCCTGCGGAGGATGACGCGGCTGCGTGTGTCCTGGTCCACGCAGGAGGACGGGCTGCTTGTGCTCTGCCGAATCGCTAGCAACGTCCTCAATTCCAAGGTGAAGGGCCCGTTTGTCCCCTGGCAGGTCGTGCGGGACATCTTGCATGCCACCTTTGAAGAGTCTCTGGATAAAACATCTCACTCCGTTGGACGAAGAGCTCGCTACATTGTGAGGAACCCACAGGCCTATATGAACTACAAGGTTTGCCTGGCTGAGGTGTACCAGGACAAAGCACTGGTTGGCGATTTCATGAACCGAAAATGTGACTATGAGGACCCGAAGGTTTGCGCCAAGGAGTTTAAAGAGTTTGTGGAGAAGCTCAAAGAGAAGTTCAGTTCCGCTCTGAGGAATCCCAACCTCGACATCCCAGACACGATGCAGGAGCTGTTCGCGAGGTACCGAGTTTTGGCAATTGGAGATGAAAAGTACCGGACGAGGAAAGAGGACGAGCTCAGCAGCGTGGAGGACATCCAGTTCCTGGTGCTGCAGAACCTGATCCAGAGCACGCTGTCCCTCTCCAACAGCCAGGTGAAGTCCTGCCAGTCCTTCCAGATGTTCCGCCTCTACCGTGAGTACAAGGAGCCGGTGCTGGTGCGGGCCTTCATGGAGTGTCAGAAGAGGAGCCTGGTCAATCGGCGCCGGGTCAGCCACACAACAGGCCCCAAGAAGAACCGGGCCCTGCCCTTCGTGCCCATGTCCTACCAGCTGTCGCAGTCCTACTATAGGCTCTTTAACTGGCGATTTCCCAGCACCATCTGCACAGAGTCCTTCCAGTTCTTTGACAGTCTCCGGGCTGCCGGCAGGCTGGACCAGTCCGATCCTTTTTGCTTCAAAGACCAGGATAACAGTGAGCCCCCAGCTGGCATGGTGGCATTTTCCCTGGACGGCCCCGGCGGACACTGTGCGACCGCCCTGACCCTCTGGTCCCTGGGCCTCGTTTCCGTGGATGTCAGGATCCCAGAGCACATCCTGGTGGTGGACAGCGCGATCATGAAGAGCCTGGGGAAGGATGGGGCCTTGGAGGACGAGGAGGACGAGGAGGAAGACCTGGATGAAGGCACGGGGGCCAAGCGAGCGGGCGTCGAGGTGAAGGCGCACCAGGCCTCCCACACGAAGTACCTGCTGATGCGGGGCTGCTGTGTGCCCGGCCTCATCAGCACGCGCAACCTCAACCCCAACGACAGCGTGGTGGTCAACTCCTGCCAGGTGAAGTTCCGGCTCCGCTGCAGCCCGCTGGACACCCAGCTCAAGCCCGCCGACCCCTCTCTGCAAGAGCTGACGGAGGGGACCTCCTGCCTCCCCAACTCCTTCACCAGGCTGATGGAGCCGCCAGGAAACATGGTCAGCCGGGAGGAGTTTGCCCGCCATGGGGTGCTGTCTGGGTACAGCCCCGAGGACCTGTCTGCCGCCCAGGAGATCTGGCAGGCTGTGGTCTCCGCCGGCTGTTTTGGGATTGACAAGGAGAAGCTGAGCAGTCAGTTCTTGGCCTTGGAGAACACGGCGGGCTCCAAGACATTCCAAGACTATATCCAGGACCTCTTGGCATGGAGCCAGGTGCTGGAAGTCGGCAGCAACACCGTCCGCCTGGTGGCCATGGCCTTCGCCCGCCCCTGGCTGCTGCACTCAGTGCGGCTGAAGGACACAGAGGAGGATGCCCCGGCCACACTCCCCGAGGGACCTGCCAGCGAGAGGCTGGCTCCGCCTTCTCAGAGCACCAAGCGCCGCCCACGCTGGGCCAGCCAGAGCAGTGACACCGACGCCGACACCGATGCTGAGTATACCCGGAAGCCCCCTGCAAAGAGGCTCATGCTCCAGCACGTGCACTGGGCCCCTGGCCCCAGGCTGGCAGCAGAGGAGGGGGTGGAAACCCTGGCTTGGGCTCCACCCCTGGCTCTTGAAGACCCAGGTGCAGGGGGCACCGGGCAGGAGGACCAAGAGCGAGGCCTGCCCAGCTCCCTGGGCCCAGAGCCGCTGAGCACTCAGGCCCAGCTTCCAGAGGGCTCGGAAGACCCCAGAGGGCTCCTCGATGCCACTGGGGCTGGTGGCCTCTCCCAGGCACCTCCAGAAAAGGACTGTGAGGACATCTGCTTCATCGGCCGCCCGTGGCGCGGTGTGGATGGCCTCCTGAACATGCCGGTGTGCAAGGGCATGATGGAGGCCCTGCTCTACCACGTCATGAGCAAGCCCGGCGTCCCTGAGAGCAGCCTGCTGCAGCACTACCAGGGCGTCCTGCAGCCTGTCGCCGTGCTTGACCTGCTCCAGGGCCTGGAGTCTCTCGGCTGCATCCGGAAGCGTGTGCTGAGGAAATCCCCCACCGTGTCGCTGTTCTCTGAGCCTGGCGTGGCAGGGCCCGGGCCTGAGGTGCCCTTGGGGCTGAGTGGCAGCACCGAAGCCTTCTATGAGCCCACGCTGGACTGCACCATCCGCCTGGGCCGCATCTTCCCGCCCAAGGTCAACTGGAACAAGTGGATCCACCTGTAG

Related Sequences

XP_004856054.1 Protein

Gtf3c1 PREDICTED: general transcription factor 3C polypeptide 1 [Heterocephalus glaber]

Length: 2081 aa      View alignments
>XP_004856054.1
MDALESLLDEVALEGLDGLCLPALWSRLESRVPPFPLLLEPYTQEFLWRALATHPGISFYEEPRERPDLQLQDRYEEIDLETGILESRRDPVSLEDVYPIHMILENKDGIQGSCQFFKERKNITSNIRSKSLQPRCTMMEAFDRWGKKLIIVASQDMRYRALIGAEGDPDLKLPDFSYCILERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDILMEKLSGMLSTRSNRIETLGRLREELGLCERTFKRLYQYMLNAGLAKVITLPLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKKKVEDDHDDDDDEEVISKAVLPVDIVYERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYAREKARGELLTTVSLASMSEEPLLPEGEDAFLSESDSEEEGSRVSKRRARGAQPHVRPSAEFGPGAQPQHSTPTKGGWKLLNLHPLKRQLPSSPGAAEERASRSSGARDNLDTSGSSDFNVSFGSHCMESASGDIAMIEEVRLDNPKESGSSQKAGKHSTGLEKPHKTYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSTTANRGKVPQPPAPPEEVEEESQGQEEPSRSGDCDMNASSKPESGRGKKTDEKMGVTPMKNYHPVVVPGLGRSLGFLPKMPRLRVVHTFLWYLIYGHPACYVMEKPVLFGSERRGGRHPRGDWDASDLRDNPDGVTWETEVELSTETVYVDDASWMRFIPPIPVHRDFGFGWALVSDILLSLPLSIFVQIVQVSYKVDNLEEYLNHPLKQHTLIRFLPRPIRQQLLYKRRYIFSVMESLQRLCYMGLLQFGPTEKFQDKDQVFVFLKKKAVIIDTTICDPHYNLAHSSRPFERRLYVLNSMQDVESYWFDLQCVCLNTPLGVVRCPAVPKNSADHASDEEGSLRKEQEKAVDKHNLERKCAMQEYTTGSREIMDEGHIPGDGLGAAGLDSSFYAHLKRNWIWTSYIINKARKENITAENGLTVRLQTFLSKRPLPLGAAGSSRLPLWGEAKAGSELSAHREQFGMEREPTLGRSRRVKGGRNQKRKRLRKDPVRRTKRRRKEELPGAKIKRPRYHDEADQSALRRMTRLRVSWSTQEDGLLVLCRIASNVLNSKVKGPFVPWQVVRDILHATFEESLDKTSHSVGRRARYIVRNPQAYMNYKVCLAEVYQDKALVGDFMNRKCDYEDPKVCAKEFKEFVEKLKEKFSSALRNPNLDIPDTMQELFARYRVLAIGDEKYRTRKEDELSSVEDIQFLVLQNLIQSTLSLSNSQVKSCQSFQMFRLYREYKEPVLVRAFMECQKRSLVNRRRVSHTTGPKKNRALPFVPMSYQLSQSYYRLFNWRFPSTICTESFQFFDSLRAAGRLDQSDPFCFKDQDNSEPPAGMVAFSLDGPGGHCATALTLWSLGLVSVDVRIPEHILVVDSAIMKSLGKDGALEDEEDEEEDLDEGTGAKRAGVEVKAHQASHTKYLLMRGCCVPGLISTRNLNPNDSVVVNSCQVKFRLRCSPLDTQLKPADPSLQELTEGTSCLPNSFTRLMEPPGNMVSREEFARHGVLSGYSPEDLSAAQEIWQAVVSAGCFGIDKEKLSSQFLALENTAGSKTFQDYIQDLLAWSQVLEVGSNTVRLVAMAFARPWLLHSVRLKDTEEDAPATLPEGPASERLAPPSQSTKRRPRWASQSSDTDADTDAEYTRKPPAKRLMLQHVHWAPGPRLAAEEGVETLAWAPPLALEDPGAGGTGQEDQERGLPSSLGPEPLSTQAQLPEGSEDPRGLLDATGAGGLSQAPPEKDCEDICFIGRPWRGVDGLLNMPVCKGMMEALLYHVMSKPGVPESSLLQHYQGVLQPVAVLDLLQGLESLGCIRKRVLRKSPTVSLFSEPGVAGPGPEVPLGLSGSTEAFYEPTLDCTIRLGRIFPPKVNWNKWIHL