Sequence details NCBI ID: XM_004855975.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgap17
Gene Name Rho GTPase activating protein 17, transcript variant X1
Entrez Gene ID 101697661

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGAP17 ENSCPOG00000009350 (Guinea pig)

Gene Details

Rho GTPase activating protein 17

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008392, Guinea pig)

Protein Percentage 92.5%
CDS Percentage 91.52%
Ka/Ks Ratio 0.19475 (Ka = 0.0432, Ks = 0.2216)

ARHGAP17 ENSG00000140750 (Human)

Gene Details

Rho GTPase activating protein 17

External Links

Gene Match (Ensembl Protein ID: ENSP00000289968, Human)

Protein Percentage 88.3%
CDS Percentage 87.35%
Ka/Ks Ratio 0.18073 (Ka = 0.0668, Ks = 0.3694)

Arhgap17 ENSMUSG00000030766 (Mouse)

Gene Details

Rho GTPase activating protein 17

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102050, Mouse)

Protein Percentage 87.68%
CDS Percentage 83.06%
Ka/Ks Ratio 0.11866 (Ka = 0.0765, Ks = 0.6447)

Arhgap17 ENSRNOG00000013836 (Rat)

Gene Details

Rho GTPase activating protein 17 (Arhgap17), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038504, Rat)

Protein Percentage 86.98%
CDS Percentage 83.19%
Ka/Ks Ratio 0.13838 (Ka = 0.0826, Ks = 0.5972)

Genome Location

Sequence Coding sequence

Length: 2649 bp    Location: 9974175..9881643   Strand: -
Raw sequence   
>XM_004855975.1
ATGAAGAAGCAGTTCAACCGCATGAAGCAGCTGGCCAACCAGACCGTGGGCAGAGCTGAGAAAACAGAAGTCCTCAGTGAAGATCTGCTACAGATTGAGCGGCGCCTGGATGCTGTGCGGTCCATGTGCCACCATTCCCATAAGCGTCTGATTGCGTGCTTCCAGGGCCAGCATGGCACCGAATCTGAGAGGAGACACAAAAAACTCCCTCTGACAGCACTTGCTCAGAATATGCAAGAAGCATCAACTCAGCTGGAAGAATCTCTCCTGGGGAAGATGCTGGAGACATGCGGAGATGCTGAGAATCAGCTGGCTCTGGAGCTCTCTCAGCATGAAGTGTTTGTGGAAAAGGAGATCGTGGACCCTCTCTACAGCATAGCGGAGGTGGAGATCCCCAACATCCAGAAGCAGAGGAAACAGCTTGCTAGATTGGTGTTGGACTGGGATTCGGTCAGAGCCAGGTGGAACCAAGCTCACAAATCTTCAGGCACCAACTTCCAGGGGCTCCCATCAAAAGTAGATACTCTAAAGGAAGAGATGGATGAAGCCGGAAATAAAGTAGAGCAGTGCAAGGATCAGCTCGCGGCAGACATGTACAACTTCGTGGCCAAAGAAGGGGAGTACGGCACATTTTTTGTTACGTTATTAGAAGCCCAAGCAGATTACCATAGAAAAGCATTAGCAGTCTTAGAAAAGGCCCTTCCCGAAATGCGAGCTCATCAAGACAAGTGGGCAGAGAAGCCCGCCTTCGGCACGCCTTTGGAGGAGCACCTGAAGCGGAGCGGGCGTGAGATCGCACTTCCCATTGAGGCCTGCGTCATGCTGCTCCTGGAGACGGGCATGAAGGAGGAGGGCCTTTTCCGAATTGGGGCTGGCGCCTCCAAGTTAAAGAAGCTGAAAGCTGCTTTGGACTGCTCCACTTCTCACTTGGATGAATTCTATTCTGACCCCCATGCTGTGGCAGGTGCTTTGAAGTCCTATTTACGGGAATTGCCTGAACCTTTGATGACTTTTAATCTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAGACAAAAAACTTCAAGATTTATGGAGAACATGTCAGAAGTTGCCACCACAGAATTTTGTTAACTTTAGGTATTTGATCAAGTTCCTTGCAAAACTTGCTCAGACCAGTGATGTTAATAAAATGACTCCCAGCAACATTGCAATTGTGTTAGGCCCAAACTTGTTATGGGCCAAAAATGAAGGAACACTCGCTGAGATCGCAGCAGCCACGTCGGTGCATGTGGTTGCAGTGATTGAACCCATCATTCAGCACGCCGACTGGTTCTTCCCTGAAGAGGTGGAATTTAATGTATCAGAAGCCTTTGTGCCTCTTGCCACCCCGAATTCTAATCAATCATCCCACACTGGAAATGACTGTGACTCAGGCGCCCCGGAGAGGAAGCGGCCTGCCAGCATGGCGGTGATGGAAGGAGACCTGGTGAAGAAGGAGAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGAGTGGTACTCTAAATAGAAAGCACGTATCCCCTGCTTTCCAGCCACCACTCCCGCCCACAGATGGCAGCACCGCGGCTCCTGCAGCCCCGGAGCCCCCTGCCCACAGCTCTCGGGCTGAAAGCAGCTCAGGGGGTGGGACTGTCCCCTCCTCTGCAGGCATACCGGAGCAAGGGCCGGGCCCAGGTGACAGCAGCCCTCCAAAGCCCAAGGACTCCACACCTGCAGCTGTCCCTGCATCAGGGAGAAGCAGCAGTCAGACAACCCCTGGCCAGGCCCAGGCCCAGGCCCAGTCAGGTGCTGGCCCCCATCAGCTCTCGGTCGGCCCAGCCCACAGCGCTGCTGGCCCGAGCCCTCACACTCTTCGCCGGGCTGTTAAAAAACCTGCTCCAGCACCCCCCAAACCAGGAAACCCCCCTCCTGGCCATCCCGGGGGCCAGAGTTCTCCAGGATCATCTCAGCTTCCACCGAGCATGTCACCAAAGCCAGCCGCTCGAAGTCCTTCTCCCCCGCAGCACACAGGCCAGGCACCGGGCCAACCACTGACCACTGGCCAGCCCTCAGCACCCAGGAGGTACTCCAGCAGCCTGTCGCCAATCCAAGCACCAAGCCACCCTCCGCCACAGCCCCCAACCCAGGCCACATCACAGGTGCACAGCAGGCTGGGCGGCCAGGGCGGCCCCTCCTCCGGGGCTCTGCCTGGTGAGCAAGGACTGGAGCAGCCATCTCATACCCCTCCCCAGACTCCAACGCCCCCCAGGACCCCGCCTCTAGGGAAACAGAACCTCAGCCCGCCCGGACCTCAGACCCAGGCAGTGAGTGGCCCTGAGACTGCACAGCCGCATACTGGAACCTTACCGAGACCTAGACCAGTCCCAAAGCCACGGAACCGACCCAGCATGCCTCCACCCCCACATCCTCCTGGCGCCCACCCAGCTGGGGACGGCAGCCTCACCGGTGCGGCTCTGACGTCCTCCAGAATAGGGACAGACACCAATTCTAGGGTTTCAGAACCACCTCGCAACATCTTTCCTGAAATGCACTCAGACTCTGCAAGCGGAGAGGCGCCTGGCCACATCCTGCTGGACATGGACAATGACACGGAAAGCACCGCCTTGTGA

Related Sequences

XP_004856032.1 Protein

Arhgap17 PREDICTED: rho GTPase-activating protein 17 isoform X1 [Heterocephalus glaber]

Length: 882 aa      View alignments
>XP_004856032.1
MKKQFNRMKQLANQTVGRAEKTEVLSEDLLQIERRLDAVRSMCHHSHKRLIACFQGQHGTESERRHKKLPLTALAQNMQEASTQLEESLLGKMLETCGDAENQLALELSQHEVFVEKEIVDPLYSIAEVEIPNIQKQRKQLARLVLDWDSVRARWNQAHKSSGTNFQGLPSKVDTLKEEMDEAGNKVEQCKDQLAADMYNFVAKEGEYGTFFVTLLEAQADYHRKALAVLEKALPEMRAHQDKWAEKPAFGTPLEEHLKRSGREIALPIEACVMLLLETGMKEEGLFRIGAGASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNLLWAKNEGTLAEIAAATSVHVVAVIEPIIQHADWFFPEEVEFNVSEAFVPLATPNSNQSSHTGNDCDSGAPERKRPASMAVMEGDLVKKESFGVKLMDFQAHRRSGTLNRKHVSPAFQPPLPPTDGSTAAPAAPEPPAHSSRAESSSGGGTVPSSAGIPEQGPGPGDSSPPKPKDSTPAAVPASGRSSSQTTPGQAQAQAQSGAGPHQLSVGPAHSAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSPGSSQLPPSMSPKPAARSPSPPQHTGQAPGQPLTTGQPSAPRRYSSSLSPIQAPSHPPPQPPTQATSQVHSRLGGQGGPSSGALPGEQGLEQPSHTPPQTPTPPRTPPLGKQNLSPPGPQTQAVSGPETAQPHTGTLPRPRPVPKPRNRPSMPPPPHPPGAHPAGDGSLTGAALTSSRIGTDTNSRVSEPPRNIFPEMHSDSASGEAPGHILLDMDNDTESTAL