Sequence details NCBI ID: XM_004855962.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Tnrc6a
Gene Name trinucleotide repeat containing 6A, transcript variant X1
Entrez Gene ID 101724472

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5094 bp    Location: 9777237..9806470   Strand: +
Raw sequence   
>XM_004855962.1
ATGGATGCTGATTCTGCCTCCAGTTCTGAATCAGAAAGAAACATCACTATCATGGCTTCAGGGAGCACAGGGGGTGAAAAAGATAGCCTTCGGAATAGCACTGGACTTGGTTCCCAAAACAAGTTTGTGGTTGGTAGCAGCAGCAATAATGTGGGCCACGGAAGTAGTCCTGGGCCGTGGGGTTTTTCCCACGGAGCCATAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCAGAAAGTAGCAACAATAGAATGAATGCTTGGGGCACTGTAAGTTCTTCATCAAATGGAGGGTTAAATCCAAGCACTTTGAATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGGAGTGGCAGTTCTGGCATCAATATTCAGTGCAGTACCGTAGGCCAGATGCCTAACAATCAGAGTATTAACTCTAAAGTGAGTAGTTCTACCCATGGTACCTGGGGAAGCCTTCAGGAAACTTGTGAATCTGAAGTAAGTGGTACACAGAAGGTTTCATTCAGTGGTCAACCTCAAAATATTACCACTGAAATGTCTGGACCAAATAACACTACTAACTTTATGACCTCTAGTTTACCAAACTCCGGTTCAGTGCAGAATAATGAACTGCCTGGTAGTAATACAGGGGCCTGGCGAGTGAGCACAATGAATCATCCTCAGATACAGGCTCCATCAGTTATGAATGGCACTTCCCTTTCTCACCTTAGCAACGGAGAGTCCAAAAGTGGAGGCTCTTATGGTACTACCTGGGGTGCCTATGGTTCTAGTTACTCTGGAGACAAATGTTCAGGCCCCAGTGGCCAAGCTAATGGTGACACTGTGAATGCAACTCTAATGCAGCCTGGCATAAATGGGCCTGTGGGCACTAACTTTCAAGTTAACACGAATAAAGGAGGAGGTGTATGGGAGTCTGGGGCAGCAAATTCCCAGAGTACATCATGGGGAAGTGGAAATGGGGTAAATTCTGGAGGAAGTCGGAGAGGATGGGGAACCCCTGCACAAAACACTGGCACTAATATACCCAGCGTCGAGTGGAACAAACTGCCTAGCAATCAGCATTCCAATGATAGTGCAAATGGCAATGGTAAGAAGTTTACAAATGGATGGAAATCTACTGAGGAAGAGGATCAGGGTTCTGCCACATCTCAGACAAATGAGCAAAGCAGTGTATGGGCCAAAACAGGAGGTGCCGTGGAGAGTGATGGTAGTACAGAAAGCACTGGACGCCTTGAGGAAAAAGGAACTGGGGAAAGTCAGAGTAGAGATAGAAGAAAACTTGATCAGCACACATTACTCCAAAGCATTGTGAACAGAACTGACTTAGATCCGCGTGTCTTGTCCAACTCTGGTTGGGGACAGACTCCTATTAAGCAGAATACTGCCTGGGATACTGAAACGTCACCTAGAGGGGAAAGAAAGATTGACAATGGGACAGAGGCCTGGGGAAGCTCTGCAACACAGACTCTTAACTCAGGGGCATGTGTAGATAAGACTAGCCCTAATAATAATGATACCTCATCTGTATCGGGGTGGGGCGATCCCAAACCTGCTCTGAGGTGGGGAGATTCCAAAGGCTCAAACTGCCAGGGGGGGTGGGAAGATGATTCTGCTGCTACAGGAATGATCAAGAGCAATCAGTGGGGGAACTGCAAAGAAGAGAAGTCCACATGGAATGATTCGCAAAAGAACAAACAGGGATGGGGTGATGGACAAAAATCAAACCCAGGTTGGTCCGTTTCTGCCAGTGACAACTGGGGGGAGACTTCAAGGAGTAACCATTGGGGTGAAACTAATAAGAAATCCAGCTCAGGAGGTAGTGACAGTGACAGATCCATTTCTGGGTGGAACGAACTTGGTAAAACTAGTTCATTTACTTGGGGAAATAACATAAATCCAAATAATTCATCAGGATGGGATGAATCTTCTAAACCTAATCCCTCCCAAGGATGGGGGGAGCCTCCAAAGTCTAATCAGTCTCTAGGTTGGGGAGATTCGTCAAAGCCAGTCAGCTCTCCGGACTGGAACAAGCAACAAGACATTGTTGGATCTTGGGGAATCCCACCAGCTACAGGCAAACCTCCTGGTACAGGCTGGTTGGGCGGACCTATACCAGCTCCAACAAAAGAAGAAGAACCCACAGGCTGGGAGGAACCATCCCCAGAATCTATACGACGCAAAATGGAGATTGATGATGGAACTTCTGCTTGGGGAGATCCAAGCAAATACAACTACAAAAATGTGAACATGTGGAATAAAAATGTCCCAAATGGCAGCAGCCGTTCAGACCAGCAAGCACAGGTACATCAGCTGCTGCCATCTGCAAGTGCCATCTCAAACAAAGAGGCAAGCAGTGGCTCTGGCTGGGGTGAGCCCTGGGGGGAGCCCTCTGCTCCAGCCACCACTGTGGATAATGGTACTTCAGCATGGGGTAAGCCTATAGACAGTGGCCCCAGCTGGGGGGAACCCATTGCTGCGGCATCCAGCACATCCACGTGGGGCTCCAGCTCTGTCGGTCCACAGGTGTTAAGCAAATCTGGGCCAAAATCTATGCAAGATGGCTGGTGTGGTGAGGATATGCCATTGCCTGGAAATCGCCCTGCTGGCTGGGAAGAGGAAGAGGATGTAGAGATTGGAATGTGGAATAGTAACTCATCTCAAGAGCTCAACTCATCTTTAAATTGGCCACCATATACCAAGAAAATGTCATCGAAGGGAATGATGAAAGGTGGAAACAAGCAAGAAGAAGCATGGATAAATCCATTTGTTAAACAGTTTTCAAATATCAGTTTTTCGAGAGACTCACCAGAAGAAAATGTACAGAGCAATAAGATGGACCTTTCCGGAGGAATGTTACAAGACAAACGAATGGAGATAGATAAACATACCCTAAATATTGGTGATTACAATCGAACGGTCGGGAAAGGCCCAGGTTCTCGACCCCAGATTTCCAAAGAGTCTTCCATGGAACGAAATCCTTATTTTGATAAGGATGGCATTGTAGCAGATGAATCCCAAAACATGCAGTTTATGTCCAGTCAAAGCATGAAGCTTCCCCCTTCAAATAGTGCACTACCTAACCAGGCCCTTGGATCCATACCAGGGCTGGGTATGCAAAACTTGAATTCTGTTAGACAGAATGGCAATCCCAGTGTGTTTGGTGTTGGAAACACAGCAGCACAACCCCGGGGCATGCAGCAGCCTCCAGCACAACCTCTCAGTTCATCTCAGCCTAATCTCCGTGCTCAAGTGCCTCCTCCATTACTCTCCCCTCAGGTTCCAGTTTCATTGCTGAAGTATGCACCAAACAACGGTGGCCTGAATCCGCTCTTTGGCCCTCAACAGGTAGCCATGCTGAACCAGCTATCCCAACTAAACCAGCTTTCTCAGATCTCCCAGTTACAGCGATTGTTAGCGCAGCAGCAAAGGGCGCAGAGTCAGAGAAGCGTGCCTTCCGGTAACCGGCAGCAGCAAGACCAGCAGGGTCGACCTCTTAGTGTGCAGCAGCAAATGATGCAGCAGTCTCGTCAACTTGACCCAAACCTGTTGGTGAAGCAGCAGACTCCACCGTCCCAGCAGCAGTCGCTCCATCAGCCAGCCATGAAGTCTTTCCTGGACAATGTCATGCCCCACACTACACCGGAGCTGCAAAAAGGGCCATCACCAATAAATGCTTTCAGCAACTTTCCTATAGGCTTGAACTCAAACTTGAATGTAAATATGGATATGAACAGTATTAAAGAGCCACAGTCAAGACTAAGGAAGTGGACTACAGTGGACAGCATTTCTGTGAACACATCTTTGGATCAAAACTCCAGCAAACATGGTGCTATTTCAAGTGGTTTCAGGCTGGAAGAATCTCCATTTGTTCCCTATGACTTTGTGAACAGCAGTACTTCACCAGCCAGCCCTCCGGGCTCCATAGGAGATGGCTGGCCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTGGCCACCAGAATTTCGCCCTGGTGAACCATGGAAAGGTTATCCAAACATTGACCCCGAAACTGACCCTTACGTCACTCCTGGCAGTGTCATAAACAATCTTTCAATTAATACTGTGCGGGAAGTTGACCACCTCAGGGACAGGAACAGTGGGTCATCCTCATCCTTGAACACCACGCTGCCTTCAACTAGTGCCTGGTCATCCATTCGTGCCTCCAACTACAGCGTTCCCCTCAGCAGTACAGCACAAAGCACTTCAGCCAGAAATAGTGATTCCAAATTGACGTGGTCTCCTGGTTCAGTTACAAACACCTCTCTGGCTCACGAGCTGTGGAAGGTCCCTCTGCCACCTAAAAACATCACTGCTCCGTCCCGCCCACCTCCGGGACTGACTGGTCAGAAGCCACCTTTGTCTACGTGGGATAATTCTCCCCTTCGTGTAGGTGGAGGATGGGGAAGTTCTGACGCCAGATACACCCCAGGTTCCAGCTGGGGTGAGAGCAGCTCAGGGAGAATAACAAATTGGCTTGTCCTGAAAAACCTTACACCTCAGATCGATGGCTCCACCCTGCGCACCCTGTGCATGCAGCATGGCCCGCTGATAACATTCCACCTGAACCTCCCGCACGGAAGCGCTCTGGTCCGCTACAGTTCGAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACTGGGGAACACTACTATCCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAGGGTCAGTCCCTGACCCCTTCTCCTGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACGCGTTCTCCAGCCGGACCGATCTCAACCACTGGAATGGTGCTGGGCTGTCGGGAACCAACTGTGGAGACCTTCACGGCACCTCCCTCTGGGGGACCCCGCACTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGTGACCCCCGGGGAATTAGCAGCCCCTCCCCCATTAATGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGGGGGGAGTCCATGTGA

Related Sequences

XP_004856019.1 Protein

Tnrc6a PREDICTED: trinucleotide repeat-containing gene 6A protein isoform X1 [Heterocephalus glaber]

Length: 1697 aa      
>XP_004856019.1
MDADSASSSESERNITIMASGSTGGEKDSLRNSTGLGSQNKFVVGSSSNNVGHGSSPGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTVGQMPNNQSINSKVSSSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEMSGPNNTTNFMTSSLPNSGSVQNNELPGSNTGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGESKSGGSYGTTWGAYGSSYSGDKCSGPSGQANGDTVNATLMQPGINGPVGTNFQVNTNKGGGVWESGAANSQSTSWGSGNGVNSGGSRRGWGTPAQNTGTNIPSVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQSSVWAKTGGAVESDGSTESTGRLEEKGTGESQSRDRRKLDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKIDNGTEAWGSSATQTLNSGACVDKTSPNNNDTSSVSGWGDPKPALRWGDSKGSNCQGGWEDDSAATGMIKSNQWGNCKEEKSTWNDSQKNKQGWGDGQKSNPGWSVSASDNWGETSRSNHWGETNKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPNNSSGWDESSKPNPSQGWGEPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQVHQLLPSASAISNKEASSGSGWGEPWGEPSAPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQVLSKSGPKSMQDGWCGEDMPLPGNRPAGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGMMKGGNKQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHTLNIGDYNRTVGKGPGSRPQISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIPGLGMQNLNSVRQNGNPSVFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLDNVMPHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFVNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYSVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGSSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGSALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTPSPGWQSLGSSQSRLGSLDCSHAFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM