Details from NCBI annotation

Gene Symbol Ubfd1
Gene Name ubiquitin family domain containing 1, transcript variant X2
Entrez Gene ID 101718943

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UBFD1 ENSCPOG00000006872 (Guinea pig)

Gene Details

ubiquitin family domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006196, Guinea pig)

Protein Percentage 96.14%
CDS Percentage 94.53%
Ka/Ks Ratio 0.09948 (Ka = 0.0191, Ks = 0.1922)

UBFD1 ENSG00000103353 (Human)

Gene Details

ubiquitin family domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000379217, Human)

Protein Percentage 95.15%
CDS Percentage 93.2%
Ka/Ks Ratio 0.08728 (Ka = 0.0222, Ks = 0.2542)

Ubfd1 ENSMUSG00000030870 (Mouse)

Gene Details

ubiquitin family domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033158, Mouse)

Protein Percentage 95.79%
CDS Percentage 91.8%
Ka/Ks Ratio 0.05557 (Ka = 0.0195, Ks = 0.3517)

Ubfd1 ENSRNOG00000018243 (Rat)

Gene Details

ubiquitin family domain containing 1 (Ubfd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025072, Rat)

Protein Percentage 94.5%
CDS Percentage 91.69%
Ka/Ks Ratio 0.08114 (Ka = 0.026, Ks = 0.3211)

Genome Location

Sequence Coding sequence

Length: 936 bp    Location: 8719246..8735372   Strand: +
>XM_004855946.1
ATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAGTCGGGCATGGACACCGAGGCCGAGACGGTGGTAACCGAGGTGCCCGCGCAGCCCCTCAACTGCGTGGATGCCGAGGCCGCAGCGGGGGCGGCGGGCGAGGACTCCTGCGACGCTCGAGGCAGCCTGCAGCCGGCCCCGGCCCAGCCCCCTGGGGACCCCGCGGCCCAGGCCTCGGTCAGCAACGGCGAAGACGCGGGCGGCGGCGCGGGCAAGGAGCTGGAGCTGGTGGACCTGAAGATCATCTGGAACAAGACCAAGCACGACGTGAAGGTTCCCCTGGACAGCACAGGTTCCGAGCTGAAACAGAAGATTCACTCCATTACAGGTCTCCCGCCTGCCATGCAGAAGGTCATGTATAAGGGGCTTGTCCCTGAAGATAAGACGTTGAGGGAAATAAAAGTGACCAGTGGGGCCAAGATCATGGTGGTTGGCTCCACGATAAATGATGTTTTAGCAGTAAACACACCCAAAGAGGCTGCGCAGCAGGATGCCAAGGCTGAAGAGAACAAGAAGGAGCCTCTCTGCAGGCAAAAACAACACAGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCTTCTGTTAAGGGTGTCCAGGAGCGCCTGCCAGCGGTACCTTTGTCCGGCATGTACAATAAGTCTGGAGGAAAAGTGAGACTCACCTTCAAGCTAGAACAAGATCAGCTATGGATTGGCACTAAAGAGCGGACTGAGAAATTGCCCATGGGCTCCATTAAAAATGTGGTCAGCGAACCTATCGAAGGACATGAAGACTACCACATGATGGCATTTCAGTTGGGCCCCACGGAAGCCTCGTACTACTGGGTGTACTGGGTTCCAACTCAGTATGTGGATGCAATCAAAGACACTGTGCTGGGCAAGTGGCAGTATTTTTGA

Related Sequences

XP_004856003.1 Protein

Ubfd1 PREDICTED: ubiquitin domain-containing protein UBFD1 isoform X2 [Heterocephalus glaber]

Length: 311 aa      View alignments
>XP_004856003.1
MAAAGAPDGMEESGMDTEAETVVTEVPAQPLNCVDAEAAAGAAGEDSCDARGSLQPAPAQPPGDPAAQASVSNGEDAGGGAGKELELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKEAAQQDAKAEENKKEPLCRQKQHRKVLDKGKPEDVMPSVKGVQERLPAVPLSGMYNKSGGKVRLTFKLEQDQLWIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKDTVLGKWQYF