Details from NCBI annotation

Gene Symbol Scnn1b
Gene Name sodium channel, non-voltage-gated 1, beta subunit, transcript variant X2
Entrez Gene ID 101717352

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

Scnn1b ENSCPOG00000013503 (Guinea pig)

Gene Details

Cavia porcellus sodium channel, nonvoltage-gated 1 beta (Scnn1b), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012158, Guinea pig)

Protein Percentage 87.17%
CDS Percentage 88.99%
Ka/Ks Ratio 0.11396 (Ka = 0.0611, Ks = 0.5364)

SCNN1B ENSG00000168447 (Human)

Gene Details

sodium channel, non-voltage-gated 1, beta subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000345751, Human)

Protein Percentage 82.94%
CDS Percentage 85.55%
Ka/Ks Ratio 0.10284 (Ka = 0.0848, Ks = 0.825)

Scnn1b ENSMUSG00000030873 (Mouse)

Gene Details

sodium channel, nonvoltage-gated 1 beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033161, Mouse)

Protein Percentage 83.36%
CDS Percentage 83.94%
Ka/Ks Ratio 0.0849 (Ka = 0.0845, Ks = 0.9947)

Scnn1b ENSRNOG00000030981 (Rat)

Gene Details

sodium channel, nonvoltage-gated 1, beta (Scnn1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063755, Rat)

Protein Percentage 83.67%
CDS Percentage 84.2%
Ka/Ks Ratio 0.07718 (Ka = 0.0816, Ks = 1.0577)

Genome Location

Sequence Coding sequence

Length: 1932 bp    Location: 8549709..8581827   Strand: +
>XM_004855941.1
ATGCAAGTGAGGAAGTACCTGCTGAAGGGGCTGCACCGGCTGCAGAAGGGCCCGGGCTACACGTACAAGGAGCTGCTTGTCTGGTACTGCAACAACACCAACACCCACGGCCCCAAGCGCATCATCTGCGAGGGCCCGAAGAAGAAGACCATGTGGTTCCTGATCACTCTGCTCTTCGCCTCGCTCGTGTGCTGGCAGTGGGGCGTCTTCATCAAGACCTACCTGAGCTGGGACGTCAGCGTCTCGCTCTCGCTGGGCTTCAAGACCATGGACTTCCCCGCCGTCACCGTCTGCAACGCCAGCCCTTTCCAGTATTCCAAGGCCAAGCCCTTGCTGAAGGACCTGGACGCGCTGATGAAGGCCGTGCTGGAGAGGATCCTGGCGCCTGAGCCCAGCCGCGCCAATGCCACCGGCGCGCTGAACTTCACCATCTGGAACCAAGCGCCCCTGGTGCTCATTAACGAGCAGGACCCCCGCCACCCAGTGGTCCAAGACCTCTTCGACCTCTTTGGGAGCAACCACAATGGCTCAGCGGGCGGCAGCCCCGTCCCCGGAAGGACCTGCACTGCCCCTGGGTGCAAGTTGGCCATGAGACTGTGCACCCTCAATGGGACCGTGTGCACCTTCCGGAACTTCACCAGCGCCACCCGGGCTGTGACCGAGTGGTACGGCCTGCAGGCCACCAACATCTTCGCACAGGTGCCGCGCCAGGAGCTGGTGCAGATGGGCTACCCGGGCGAGCACATGATCCTGGCCTGCATGTTTGGGACAGAGCCCTGCAGCTACCGGAACTTCACACGCATCTTCTACCCTGATTACGGCAACTGCTACGTCTTTAACTGGGGCATGACGGAGAAGGCACTCCCTTCGGCCAACCCTGGGGCAGAATTCGGTCTGAAGCTGATCCTGGACATAGACCAGGAGGACTACATCCCCTTCCTCACGTCCACAGCGGGGGCCCGGCTGGTGCTTCACGAGCAGAGGACCTACCCCTTCATCAAAGAGGAAGGCATCTATGCCATGGCGGGAACGGAGACCTCCATCGGGGTGCTGGTGGACAAGCTGCAGCGCATGGGCGAACCCTACAGCCCATGCACCATGAACGGCTCTGACGTAGCCATCAGAAACCTCTACAGAGACTACAACACCACCTACTCCATCCAGGCCTGTCTCCACTCCTGCTTCCAAGACCATATGATCCGCAGCTGCAGCTGTGGCCACTACACATACCCACTGCCCCCCGGGGAGAGATACTGCAACAACCAGGACTTCCCGGACTGGGCCTACTGCTACTTCGACCTGCGGATGAGTGTGGTCCAGAGAGAGACCTGTATCAACATGTGCAAGGAGTCCTGCAATGACACCCAGTACAAGATGACCATCTCCATGGCCGACTGGCCTTCTGAGGCCTCGGAGGACTGGATTTTCCACGTCCTCTCTCAAGAGCGAGACCAGAGCACCAATATCACCTTGAGCAGGACTGGAATCGTCAAGCTCAATATCTACTTTCAAGAATTCAACTACCGTACCATTGAGGAATCAGCAGCCAATAATATCGTCTGGCTGCTCTCAAATCTGGGAGGCCAGTTTGGCTTCTGGATGGGGGGCTCGGTGCTGTGCCTCATCGAATTTGGGGAGATCATCATTGACTTCGTGTGGATCACCATCATCAAGCTGGTGGCCTTCTCCAAGGGCCTACGGCAGAAGCGAGCCCAGGCTCCCTACACCGGCCCGCCCCCCACCGTGGCCGAGCTGGTGGAGGCCCACACCAACTTTGGCTTCCAGCCCGACGCCAACCTCAGCCCCCACGCGGAGGCCCACCCTGAGGAGCAGACTCCGCCCATCCCCGGGACCCCGCCCCCCAACTACGACTCCCTGCGTCTGCAGCCGCTGGACACCGTCCAGTCGGACAGCGAGGGCGATGCGGCCTAG

Related Sequences

XP_004855998.1 Protein

Scnn1b PREDICTED: amiloride-sensitive sodium channel subunit beta isoform X2 [Heterocephalus glaber]

Length: 643 aa      View alignments
>XP_004855998.1
MQVRKYLLKGLHRLQKGPGYTYKELLVWYCNNTNTHGPKRIICEGPKKKTMWFLITLLFASLVCWQWGVFIKTYLSWDVSVSLSLGFKTMDFPAVTVCNASPFQYSKAKPLLKDLDALMKAVLERILAPEPSRANATGALNFTIWNQAPLVLINEQDPRHPVVQDLFDLFGSNHNGSAGGSPVPGRTCTAPGCKLAMRLCTLNGTVCTFRNFTSATRAVTEWYGLQATNIFAQVPRQELVQMGYPGEHMILACMFGTEPCSYRNFTRIFYPDYGNCYVFNWGMTEKALPSANPGAEFGLKLILDIDQEDYIPFLTSTAGARLVLHEQRTYPFIKEEGIYAMAGTETSIGVLVDKLQRMGEPYSPCTMNGSDVAIRNLYRDYNTTYSIQACLHSCFQDHMIRSCSCGHYTYPLPPGERYCNNQDFPDWAYCYFDLRMSVVQRETCINMCKESCNDTQYKMTISMADWPSEASEDWIFHVLSQERDQSTNITLSRTGIVKLNIYFQEFNYRTIEESAANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDFVWITIIKLVAFSKGLRQKRAQAPYTGPPPTVAELVEAHTNFGFQPDANLSPHAEAHPEEQTPPIPGTPPPNYDSLRLQPLDTVQSDSEGDAA