Sequence details NCBI ID: XM_004855932.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Igsf6
Gene Name immunoglobulin superfamily, member 6, transcript variant X5
Entrez Gene ID 101713628

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IGSF6 ENSCPOG00000014429 (Guinea pig)

Gene Details

immunoglobulin superfamily, member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012996, Guinea pig)

Protein Percentage 71.97%
CDS Percentage 81.45%
Ka/Ks Ratio 0.63139 (Ka = 0.1932, Ks = 0.3061)

IGSF6 ENSG00000140749 (Human)

Gene Details

immunoglobulin superfamily, member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000268389, Human)

Protein Percentage 68.33%
CDS Percentage 76.25%
Ka/Ks Ratio 0.40078 (Ka = 0.2222, Ks = 0.5544)

Igsf6 ENSMUSG00000035004 (Mouse)

Gene Details

immunoglobulin superfamily, member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039059, Mouse)

Protein Percentage 61.6%
CDS Percentage 73.14%
Ka/Ks Ratio 0.53351 (Ka = 0.2882, Ks = 0.5402)

Igsf6 ENSRNOG00000017277 (Rat)

Gene Details

immunoglobulin superfamily, member 6 (Igsf6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023262, Rat)

Protein Percentage 65.55%
CDS Percentage 74.93%
Ka/Ks Ratio 0.44925 (Ka = 0.248, Ks = 0.5521)

Genome Location

Sequence Coding sequence

Length: 744 bp    Location: 7835011..7828049   Strand: -
Raw sequence   
>XM_004855932.1
ATGGGCACTGTGAACAGGAGCAAGACCTTTCCTGGTCTGGAAATCAACCTGATTCTGTTTTATGCAGGCATTGTGGGTGCCTGCACTGTCTCTGTTGTGCAGCCAGGTCACCTGGAGGTGGACTACACCTACACGGCTGTCACCATAGAGTGCACCTTCTCCACAACTGGATGCCCTTCACAGCAACCCCTGAGCCTGTGGTTTCGCTACGGCGTTCACCAGGCTGAGAGCCTCTGCTCGGCTGGATGCAGAAGTGCAGCAGATAAATTCACAGTGAGGGAAGCCCTGGACCAGAACCAAGTTTCTCTCACTGTCAACAGGGTGACTCCAAATGACAGTGCAGTTTATATCTGCGGAATAGCATTTCCTAATGCACAGGCACCGACAGCTAAGCAAACTGGAGGTGGGACCACACTGGTGGTAAGAGAAAGCAAGCTTCTCAGCAAGGAACTGCAGGGTGTCTTCACAGCACTCTTAGCATTGCTCTCAATCTACGTTACTGGCATATGTGTGATCTTCACAGTTCTCTCCAAATCAAAATCTAACACTCTAAACAGCAAAGAAACAGAAGATTCACAAAAGAAGAAAAGTGCTCGGCGTATTTTTCAGGAAATTGCTCAAGAACTATACCATAAGAGATATGTGGAAACAAGCCAACAATCTGTAAGTATAAAATACCAAAAGATGCAATACAGACATAAAGCATGCTTCACTGAAAAGACTAAGCAGCCAATGAGCTGTTAA

Related Sequences

XP_004855989.1 Protein

Igsf6 PREDICTED: immunoglobulin superfamily member 6 isoform X5 [Heterocephalus glaber]

Length: 247 aa      View alignments
>XP_004855989.1
MGTVNRSKTFPGLEINLILFYAGIVGACTVSVVQPGHLEVDYTYTAVTIECTFSTTGCPSQQPLSLWFRYGVHQAESLCSAGCRSAADKFTVREALDQNQVSLTVNRVTPNDSAVYICGIAFPNAQAPTAKQTGGGTTLVVRESKLLSKELQGVFTALLALLSIYVTGICVIFTVLSKSKSNTLNSKETEDSQKKKSARRIFQEIAQELYHKRYVETSQQSVSIKYQKMQYRHKACFTEKTKQPMSC