Sequence details NCBI ID: XM_004855809.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccp110
Gene Name centriolar coiled coil protein 110kDa, transcript variant X2
Entrez Gene ID 101702685

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCP110 ENSCPOG00000013740 (Guinea pig)

Gene Details

centriolar coiled coil protein 110kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012377, Guinea pig)

Protein Percentage 85.3%
CDS Percentage 88.94%
Ka/Ks Ratio 0.27703 (Ka = 0.0784, Ks = 0.2831)

CCP110 ENSG00000103540 (Human)

Gene Details

centriolar coiled coil protein 110kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000370803, Human)

Protein Percentage 80.87%
CDS Percentage 86.22%
Ka/Ks Ratio 0.2952 (Ka = 0.1059, Ks = 0.3588)

Ccp110 ENSMUSG00000033904 (Mouse)

Gene Details

centriolar coiled coil protein 110

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102167, Mouse)

Protein Percentage 72.17%
CDS Percentage 78.21%
Ka/Ks Ratio 0.27344 (Ka = 0.1738, Ks = 0.6357)

Ccp110 ENSRNOG00000027405 (Rat)

Gene Details

centriolar coiled coil protein 110kDa (Ccp110), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035030, Rat)

Protein Percentage 71.62%
CDS Percentage 78.05%
Ka/Ks Ratio 0.28988 (Ka = 0.1835, Ks = 0.633)

Genome Location

Sequence Coding sequence

Length: 3039 bp    Location: 2871657..2898471   Strand: +
Raw sequence   
>XM_004855809.1
ATGGAAGAGTATGAAGAATTCTGTGAAAAAACTCTTGCCCGAATCCAAGAAGCGTCACTATCCACAGAGAGCTTTCTGCCTGCTCAGTCCGAAAGTATCTCACTGATTCGTTTCCATGGAGTGGCTGTGCTTTCTCCACTGCTTAATATTGAGAAGAGAAAGGAAATACAACAAGAAAAACAGAAAGCACTCAACGTAGAAGCGAGGAAGCAGGTTAATAGGAAGAAAGCTTTACTGACTCGTGTCCAGGAGATTCTTGAAAATGTTCAGGTTAGAAAAGCACGTAAGGCCAGTGATTTTGATCAGTGGGAGGCCGAAACAGCTTACTCTAATGCAGAAGTCAGAAACTTGAACGTCCCTGCTGTATTTCCCAATAGCTTGCCAAGCCCTTCTGAACACCCTACTTTAGCAAGGCTTGAAAAGACAGCTGGGGTTTCGCCCACTGATAACGAGGACCAACAGAGACCTAATGGGATAGAACTAGCTAGAGACACAGAAGGGTCTAACTCTCCAAAGCAATGTGATAAATCAAGCAGTAGTCAGGCTGAAACTGAAACATCTCCAAAGATCTCAGCAACACCGAAAGGAACCCCCACTTCTGATAGTCTGGTCTCCAGGGCTGAAGAACAGGATCCACCAGTTTTGGCAGAAGTCACCCTGGACCCCTATGTAATGAGTCTTCAGAACTTGATGAAAAAGTCAAAGGAATATACAGAACGAGAACAATCTGGGCGCAGTCTGAGAAGCAGTACAAGGAGGAACATCAACGAAAGCCCCTCAGACAAGGAAAATGATGCTGTTACAGTGAGCGAGTGTGTGAAGGAGAAAGCCCCGCTGACAGGCAAACGCTGTGGCTCGGCGATTCCTGATAAATTAAGCCTTAATAAATCAAATGTTCTTCTCCAAGGTGCTTGCTCTCAGCCAGGCAGCACGAATACATCTGTTTTAGCTAGCTTTTCTAAAGTAGATATTCCTGTCCAAACGGGGCATCCCACTGTTCCACATTCTGAGGCTGATTTTAAAGTTATTCCCACTTTTATTACTGAAAATAATGTGATCAAAAGTCTTACAGGTTCATATGCCAAATTACCTAGTCCTGAGCCAAGTGTGAGCCCTAAAATGCATCGAAGGCATTCCAGGCCATCTTCAGCATGTCATATACTTATAAATAACCCAATAAATGCCTGTGAGTTAAGCCCTAAAGGAAAAGAACAAATGGTGAACATTATCATTCCAGATACTGATGAAAAAACAAGTGTATCAGAAACTGTACCAAAGTTACCACTTGATTTAGCAGGAGTTTGTTCAAGCAAGACTTATGTCAGCAAAAATGCTAGCGAAGCCATAGAAGATGTGGCTGTAGGTAAATCAAGTCAGGTGTGTCAGTCTTTGGGAAATCAGTTAGAAAATAAAGTTACACATGGCCTTTTTGCTGTGGAAGGCCAGTTAACATCTGATGCCAGAGGAACACACAAAATGAATAATACTTGTTCTACTGGGCCCAAATTGCAGGGTCCATATGTCATTCCTAGTCAGTGTATAGCAAGTCAAAACTTGGAAACTGTGAGTGGATTCAGGTCAGGCAGTGTATTGGAGAAAAACTCCTGCAATTCTCAGATGGAACTGAATAAGTCTTACAATGTAAAAAATCCATCTCCTTTACTGATGCAAAACCAGAACCCTGGACAGCAGATGGACACACCTATGGTGTCCTGTGGAAACGAACAGCTTTTGGACAACAGCTTGGAAAAAGTTAAGCGGAGACTGGATTTAGATATGGATGGTGTGCAGAAGGAAAACTGTCCTTATGTCATAACCACCAGGATAGCTGAACAAGAGAGACAATATTTGCCAGAAAAAAGATACCCTAAGGGATCATCACTCTACATTTACAAGAATAAAATATTAGAAACTAGCACAAAAGGTGAGGAGCTACTAAAAAGCAAGATGTTAGCTTTTGAAGAAATGCGGAAGAGACTAGAAGAACAGCACGCCCAGCAGTTATCCCTACTCATAGCTGAGCAGGAAAGGGAACAGGAAAGATTGCAGAAGGAAATAGAAGAACAGGAGAAAATATTAAAAGAGAAGAAGGTGATTACAACAGAAGTCTCTGAATTGAACATCAACCATACGGTAGAATTAGAATGGAGAAAAATAAGTGACTCTGGTTTGTTGGAAACAGTGCTGTCTCAAGTGGACTCATTCCGCACTTCAAATTCCCAAAATTCTGGTTTCACAAATTCCGCCCTACAGTATAGCTGTGGTTCAGCAAATGAAGCACCCTTCTACCTTTGGGGATCAACTAGTGGCGCGACCAAACTCTCAGTACCAAGGCCCTTTGGCAGGGGCCAACCTCGATGCACTCAGGTTTTTGATCCGGAAGTACAAGTGAAATTTAACAAAATAACTGCCGTGGCAAAGGGATTTCTTATTCGTAGGCTTATGCAGACCGATAAGCTGAAGCAGCTTCGACAAACTGTAAAAGATACTATGGAATTCATAAGAAGCTTTCAGTCAGAAGCGCCATTAAAGAGAGGCATTGTCTCAGCCCAAGATGCGTCCCTTCAGGAGAGAGTGTTGGCACAGTTGCGCGCTGCCCTGTATGGTATTCATGACATATTCTTTGTAATGGATGCAGCTGAAAGAATGTCTATTCTGCAGCATGATCGAGAAGTTCGAAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGTGTGGCTCTTTCAGCTGCAACACAGAAGTCTCTCGATAGGAAGAAATACATGAAAGTTGCTGAAATGAGAATGCCAAATAAGAAATTTCTGGTTAAACAAAGTCCTTCTGAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATGCACCTGTTCATAGGCTACTTAGTAGACAAGGAACCCCTAAGACATCAATGAAGGGGGTTGTGCAGAATAGACAGAAGCCTTCCCAGAGCAGAGTGCCTAGCAGAGCGCCTGTCTCAGGAGTATATGCAGGAAGAATCCAAAGAAGGCGGCCAAATGTTGCGACAATTTAA

Related Sequences

XP_004855866.1 Protein

Ccp110 PREDICTED: centriolar coiled-coil protein of 110 kDa isoform X2 [Heterocephalus glaber]

Length: 1012 aa      View alignments
>XP_004855866.1
MEEYEEFCEKTLARIQEASLSTESFLPAQSESISLIRFHGVAVLSPLLNIEKRKEIQQEKQKALNVEARKQVNRKKALLTRVQEILENVQVRKARKASDFDQWEAETAYSNAEVRNLNVPAVFPNSLPSPSEHPTLARLEKTAGVSPTDNEDQQRPNGIELARDTEGSNSPKQCDKSSSSQAETETSPKISATPKGTPTSDSLVSRAEEQDPPVLAEVTLDPYVMSLQNLMKKSKEYTEREQSGRSLRSSTRRNINESPSDKENDAVTVSECVKEKAPLTGKRCGSAIPDKLSLNKSNVLLQGACSQPGSTNTSVLASFSKVDIPVQTGHPTVPHSEADFKVIPTFITENNVIKSLTGSYAKLPSPEPSVSPKMHRRHSRPSSACHILINNPINACELSPKGKEQMVNIIIPDTDEKTSVSETVPKLPLDLAGVCSSKTYVSKNASEAIEDVAVGKSSQVCQSLGNQLENKVTHGLFAVEGQLTSDARGTHKMNNTCSTGPKLQGPYVIPSQCIASQNLETVSGFRSGSVLEKNSCNSQMELNKSYNVKNPSPLLMQNQNPGQQMDTPMVSCGNEQLLDNSLEKVKRRLDLDMDGVQKENCPYVITTRIAEQERQYLPEKRYPKGSSLYIYKNKILETSTKGEELLKSKMLAFEEMRKRLEEQHAQQLSLLIAEQEREQERLQKEIEEQEKILKEKKVITTEVSELNINHTVELEWRKISDSGLLETVLSQVDSFRTSNSQNSGFTNSALQYSCGSANEAPFYLWGSTSGATKLSVPRPFGRGQPRCTQVFDPEVQVKFNKITAVAKGFLIRRLMQTDKLKQLRQTVKDTMEFIRSFQSEAPLKRGIVSAQDASLQERVLAQLRAALYGIHDIFFVMDAAERMSILQHDREVRKEKMLRQMDKMKSPRVALSAATQKSLDRKKYMKVAEMRMPNKKFLVKQSPSETRVLQPNQGQNAPVHRLLSRQGTPKTSMKGVVQNRQKPSQSRVPSRAPVSGVYAGRIQRRRPNVATI