Details from NCBI annotation

Gene Symbol Tmc5
Gene Name transmembrane channel-like 5, transcript variant X2
Entrez Gene ID 101702116

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMC5 ENSCPOG00000013734 (Guinea pig)

Gene Details

transmembrane channel-like 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012371, Guinea pig)

Protein Percentage 83.6%
CDS Percentage 86.68%
Ka/Ks Ratio 0.29275 (Ka = 0.0998, Ks = 0.341)

TMC5 ENSG00000103534 (Human)

Gene Details

transmembrane channel-like 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000379531, Human)

Protein Percentage 76.32%
CDS Percentage 80.22%
Ka/Ks Ratio 0.29246 (Ka = 0.1619, Ks = 0.5536)

Tmc5 ENSMUSG00000030650 (Mouse)

Gene Details

transmembrane channel-like gene family 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112434, Mouse)

Protein Percentage 75.36%
CDS Percentage 76.94%
Ka/Ks Ratio 0.23161 (Ka = 0.1829, Ks = 0.7898)

Tmc5 ENSRNOG00000036760 (Rat)

Gene Details

transmembrane channel-like protein 5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059631, Rat)

Protein Percentage 73.52%
CDS Percentage 75.89%
Ka/Ks Ratio 0.2205 (Ka = 0.1924, Ks = 0.8728)

Genome Location

Sequence Coding sequence

Length: 2283 bp    Location: 2801668..2838056   Strand: +
>XM_004855807.1
ATGATGTCAGATAACCGAGTGCATGAAATCATCATAGAGCTTGAGAATGTTCCTTCTGGGATCCAAAACCATCCCTCCCCAACTCAGATTATGCGAGACAAACCATTGGCAAATTCAGCCTTCAGCATGGTTTCATCCACGTCTGATATCCATGTGACAGACTCTCTGATTTTCAGCCACAGGAATGACAAAAAGCACAACCAGTTGTTAGAATTTTCAACATCTTTGAAAGAACCGATTTCGCAGACCCTTCGTAGCCCAGAGTGCCTGGGTATAGACACTGCTTGTACTTTCCATGAAACTGTTCAAGGGCAAAAGTTAATCACATCCTTGATACCCATGACATCTAGAGAGAGGATTAAAACCATCAGGAACCAGCCAAGGACCATGGAGGAGAAAAGAAAGCTTAGGAACATAGTTGACAAAGAGAAAAGTAAACAGTCCCATCACACACTCCAGCTCAAGTGTTGTGCTCAGTATCTGAACTCCATTTCTCGGGGCTATCGGAGATCCAAGAACAGTCTTTCCGACCTCCTCAGTTCCATCAGCTTGTGGCAGAAGGCGCTCAAGGTCATCGGAGGCAAGTTTGGAACCAGTGTCCTCTCCTATTTCAACTTCCTGAGGTGGCTTTTGAAGTTCAACATCTTCTCCTTCGCCTTGAACTTTAGCTTCATCATAATCCCTCAGCTTACTGTGGCTGAAAGGAACACCCTCCAGTTCACCGGGTTGGAATTTCTCACCGGGGCGGGTTATTTTACGAAAACAGTGATGTACTATGGCTTTTACACCAATTCTACAATCAGGCATCGGAGCAGCGGGCCATCCTATGACATGCAGCTGGCCTATATCTTCACAATCGGAGCATGGCTGATTGCCTGCTTCTTCAGTTTGCTTTACAGCATGGCCAAGTATTTCCGGAACAGCTTCATTAACCCTCACATTTACTCCAGAGGGATCGCTAAATTTATCTTCTGCTGGGACTTCACTGTCACTCACGAAAAAGCTGTGAAGCTCAAGCAGAAGAATCTCAGCACGGAGATAAGGGAGAACCTGTCAGAGATCCTCCAGGAGAATGTCAAGTTCACATTCCGCCAGCAGCTGGCCTGCTTTTCTGCTCACGTAGCGGCCTGGCTTGTCTCAGCGGGAGTGGCTGCCGCCTGCTGTGTAGCCGTGTATTACCTGGCTGAGTACAACTCCGAGTTCCTGAGAACACACAGGGACCCTGGGGCGGTGCTGTTACTGCCTTTTGTGGTGTCCTGCATCAACCTGATTGTGCCGCGCTTCTACTCCATGTTCGGGCTGGTGGAGAGGTACGAGATGCCCCGGCACGAAGTCTACACCCTCCTGATCCGAAACATCTTTTTGAAAATATCAGTCATTGGAATCCTCTGTTACTCTTGGCTCAACATTGTGGCGCTATCTGATGAAGAGTGCTGGGAAACCTTCATTGGCCAGGAGATCTACCGGCTCCTTCTGATGGATTTTGTGTTTTCTTTGGCTGATTCCTTCCTGGGAGAATTTTTGAGGAGGATCATTGGGATGCGATTCATCACAAGTCTGGGCTTACAGGAGTTTGACATTGCCAGGAATGTTCTAGAACTGATCTATGCACAAACTCTGGTGTGGATTGGGATCTTCTTCTGCCCTCTGCTGCCCTTAATCCAAATGATTACTCTCTTCATCATGTTTTATGTCAAATACATCAGCCTGATGAGGAACTTCCAGCCTCCGAGCAAAGCCTGGAGGGCCTCCCAGATGATCACGGTCTTCATCTTCTTGCTCTTCTTCCCCTCCTTCACGGGAGTGCTGTGCACCCTGGCCATCACCGTCTGGAGATTGAAGCCTTCAGCTAACTGCGGTCCCTTCCGAGGTGTGCCTCTCTTCATTCAGTCCATCTACCTTTGGATCGACACCCTTCGTAAGAGGTCTGGCTACACGTGGGTGGTCTGGATCTATCAGAACCTCATCAGCAGTGTGCACTTCTTTTTCATCCTCACTATCATCGTGTTAATCATCACCTATCTTTACTGGCAGATCACAGAGGGAAGGAAGGTTATGATCAGGCTGCTCCATGAACAGATCATTAATGAGGGCAAAGATAAGATGTTCCTGATAGAAAAGTTGACCAAACTGCAGGACATGGAGAAGAGGGCAAAGCCCAGCACACTTATTCTGGAAAGGAGAGAGACGGAGCAACAAGGCCCTCTGCATTTGGGGGAATGTGATGCTACTCCTGACCTGCGATTTAGGCGCTCAGTTCAAGAAGATAACTTAAAGGCCTGA

Related Sequences

XP_004855864.1 Protein

Tmc5 PREDICTED: transmembrane channel-like protein 5 isoform X2 [Heterocephalus glaber]

Length: 760 aa      View alignments
>XP_004855864.1
MMSDNRVHEIIIELENVPSGIQNHPSPTQIMRDKPLANSAFSMVSSTSDIHVTDSLIFSHRNDKKHNQLLEFSTSLKEPISQTLRSPECLGIDTACTFHETVQGQKLITSLIPMTSRERIKTIRNQPRTMEEKRKLRNIVDKEKSKQSHHTLQLKCCAQYLNSISRGYRRSKNSLSDLLSSISLWQKALKVIGGKFGTSVLSYFNFLRWLLKFNIFSFALNFSFIIIPQLTVAERNTLQFTGLEFLTGAGYFTKTVMYYGFYTNSTIRHRSSGPSYDMQLAYIFTIGAWLIACFFSLLYSMAKYFRNSFINPHIYSRGIAKFIFCWDFTVTHEKAVKLKQKNLSTEIRENLSEILQENVKFTFRQQLACFSAHVAAWLVSAGVAAACCVAVYYLAEYNSEFLRTHRDPGAVLLLPFVVSCINLIVPRFYSMFGLVERYEMPRHEVYTLLIRNIFLKISVIGILCYSWLNIVALSDEECWETFIGQEIYRLLLMDFVFSLADSFLGEFLRRIIGMRFITSLGLQEFDIARNVLELIYAQTLVWIGIFFCPLLPLIQMITLFIMFYVKYISLMRNFQPPSKAWRASQMITVFIFLLFFPSFTGVLCTLAITVWRLKPSANCGPFRGVPLFIQSIYLWIDTLRKRSGYTWVVWIYQNLISSVHFFFILTIIVLIITYLYWQITEGRKVMIRLLHEQIINEGKDKMFLIEKLTKLQDMEKRAKPSTLILERRETEQQGPLHLGECDATPDLRFRRSVQEDNLKA