Details from NCBI annotation

Gene Symbol Gde1
Gene Name glycerophosphodiester phosphodiesterase 1, transcript variant X1
Entrez Gene ID 101701542

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GDE1 ENSCPOG00000013738 (Guinea pig)

Gene Details

glycerophosphodiester phosphodiesterase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012375, Guinea pig)

Protein Percentage 92.75%
CDS Percentage 92.85%
Ka/Ks Ratio 0.17874 (Ka = 0.0353, Ks = 0.1974)

GDE1 ENSG00000006007 (Human)

Gene Details

glycerophosphodiester phosphodiesterase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000261386, Human)

Protein Percentage 90.94%
CDS Percentage 89.83%
Ka/Ks Ratio 0.12078 (Ka = 0.0426, Ks = 0.3528)

Gde1 ENSMUSG00000033917 (Mouse)

Gene Details

glycerophosphodiester phosphodiesterase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046371, Mouse)

Protein Percentage 89.43%
CDS Percentage 87.11%
Ka/Ks Ratio 0.11779 (Ka = 0.056, Ks = 0.4752)

Gde1 ENSRNOG00000050445 (Rat)

Gene Details

glycerophosphodiester phosphodiesterase 1 (Gde1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064735, Rat)

Protein Percentage 90.81%
CDS Percentage 87.4%
Ka/Ks Ratio 0.10539 (Ka = 0.05, Ks = 0.4743)

Genome Location

Sequence Coding sequence

Length: 996 bp    Location: 2860568..2838164   Strand: -
>XM_004855804.1
ATGTGGCTGTGGGAGGAGCAGGGGGGCCTCCTGGGCCCCTTCTCCTTTCTGTTGGTGCTTCTCCTGGTGGTGACGCGCAGCCCCTTCAATGCCTGCCTTCTCACCGGCAGCCTTTACGTGCTGCTGCGCTTCTTCAGCTTCGAGCCGGTGCCCTCCCGCCGGGCTCTGCAGGTGCTCAAGCCCCGGGATCGCATTTCGGCCATCGCCCACCGCGGCGGCAGCCACGACGCTCCCGAGAACACGCTGGCGGCCATTCGGCAGGCAGCTAAGAATGGAGCAACAGGCGTGGAGCTGGACATCGAGTTTACTTCCGACGGAGTTCCTGTCTTAATGCACGACAGCACAGTAGACAGGACGACAGATGGGACTGGTCGATTGTGTGATTTGACATTTGCACAAATTAGGAAACTTAATCCTGCAGCAAATCACAGACTCAGGAATGACTTCCCTGATGAGAAGATCCCCACCCTAAGGGAAGCCGTTGCAGAGTGCCTAAACTATAACCTCACCATCTTTTTTGATGTCAAAGGCCATGCAAATATGGCAGCTGACACTCTGAAGAAGATATATATGGAATTTCCACAACTGTACAATAATAGTATGGTCTGTTCATTCTTACCAGAAGTTATCTATAAGATGAGACAAACAGATCAGAATGTAATAACAGCTTTAACTCATAGACCTTGGAGCCTGAGCCATACAGGAGATGGGAAACCCCGCTATGATACTTTCTGGAAGCACTCCATGTTTGTGGTAATGGACATTTTGCTCGATTGGAGCATGCATAATATCTTGTGGTACCTGTGTGGAATTTCAGCTTTCCTCATGCAGAAGGATTTTGTGTCCCCGGACTATTTGAAGAAGTGGTCAGCTAAAGGAGTCCACGTTGTTGGGTGGACCGTCAATACCTTGGAGGAGAAAAGTTACTATGAATCCCATCTTGGTTCCAGCTACATCACGGACAGCATGTTGGAGGACTGTGAACCTCATTTCTAG

Related Sequences

XP_004855861.1 Protein

Gde1 PREDICTED: glycerophosphodiester phosphodiesterase 1 isoform X1 [Heterocephalus glaber]

Length: 331 aa      View alignments
>XP_004855861.1
MWLWEEQGGLLGPFSFLLVLLLVVTRSPFNACLLTGSLYVLLRFFSFEPVPSRRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGVPVLMHDSTVDRTTDGTGRLCDLTFAQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLNYNLTIFFDVKGHANMAADTLKKIYMEFPQLYNNSMVCSFLPEVIYKMRQTDQNVITALTHRPWSLSHTGDGKPRYDTFWKHSMFVVMDILLDWSMHNILWYLCGISAFLMQKDFVSPDYLKKWSAKGVHVVGWTVNTLEEKSYYESHLGSSYITDSMLEDCEPHF