Details from NCBI annotation

Gene Symbol Syt17
Gene Name synaptotagmin XVII, transcript variant X2
Entrez Gene ID 101699027

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYT17 ENSCPOG00000014683 (Guinea pig)

Gene Details

synaptotagmin XVII

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013231, Guinea pig)

Protein Percentage 98.09%
CDS Percentage 94.11%
Ka/Ks Ratio 0.03674 (Ka = 0.0096, Ks = 0.2601)

SYT17 ENSG00000103528 (Human)

Gene Details

synaptotagmin XVII

External Links

Gene Match (Ensembl Protein ID: ENSP00000347538, Human)

Protein Percentage 97.02%
CDS Percentage 90.21%
Ka/Ks Ratio 0.02563 (Ka = 0.014, Ks = 0.5445)

Syt17 ENSMUSG00000058420 (Mouse)

Gene Details

synaptotagmin XVII

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080284, Mouse)

Protein Percentage 95.96%
CDS Percentage 87.38%
Ka/Ks Ratio 0.02612 (Ka = 0.02, Ks = 0.7676)

SYT17 ENSRNOG00000017136 (Rat)

Gene Details

Synaptotagmin-17

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023090, Rat)

Protein Percentage 96.38%
CDS Percentage 87.3%
Ka/Ks Ratio 0.02514 (Ka = 0.0191, Ks = 0.759)

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location: 2591693..2512339   Strand: -
>XM_004855799.1
ATGTTGGAACCACTAAACGAGGGTTTTCTTTCTAGAATCTCTGACCTGCTGCTGTGCAGATGGACCTGCCGGCATTGCTGTCAGAAGTGCTACGAGTCCAGCTGTTGCCAGTCCAGCGAGGATGAAGTTGAAATTCTGGGACCTTTCCCGGCCCAGACTCCTCCCTGGCTGATAGCCAGCCGGAGCGGTGACAAGGACGGCGACTCTGTCCACACGGCCAGCGACGTCCCGCTCACTCCGCGGACCAGCTCCCCGGATGGGAGGCGCTCATCCTCAGACACATCCAAGTCCACGTACAGCCTGACCCGGAGGATTTCCAGTCTTGAGTCTCGACGGCCCAGCTCCCCGCTCATCGATATCAAACCTATCGAGTTTGGCATCCTCAGTGCCAAGAAGGAGCCAATCCAGCCCTCGGTACTCCGGCGGACCTACACCCCGGATGACTACTTCAGGAAGTTCGAGCCCCAGCTCTACTCCCTCGACTCCAGCAGCGATGACGTGGACTCTCTGACTGATGAGGAGATCCTGTCCAAGTACCAACTGGGCATGCTCCACTTCAGCACACAGTATGACCTGCTGCACAATCACCTCACTGTCAGGGTCATCGAGGCCCGGGACCTGCCGCCCCCCATCGCCCAAGACGGCTCACGCCAGGACATGGCGCACTCCAACCCCTACGTCAAGATCTGCCTGCTGCCCGACCAGAAGAACTCTAAGCAGACGGGGGTCAAGCGCAAGACCCAGAAGCCTGTGTTTGAGGAGCGCTACACCTTCGAGATCCCCTTCCTAGAAGCCCAGAGGAGGACCCTGCTCCTGACCGTGGTGGACTTTGATAAGTTCTCACGCCACTGTGTCATTGGCAAAGTGTCCGTGCCTTTGTGCGAAGTGGACCTGGTAAAGGGCGGGCACTGGTGGAAGGCGCTGATTCCCAGCTCACAGAATGAAGTGGAGCTAGGAGAACTGCTTCTGTCCCTGAATTATCTCCCAAGCGCTGGGAGGCTGAATGTTGACATCATTCGAGCCAAGCAACTTCTGCAAACAGATGTGAGCCAAGGCTCAGACCCATTTGTGAAAATCCAGCTGGTGCATGGTCTCAAGCTTGTGAAAACCAAGAAGACATCCTTCTTAAGAGGTACAATCGACCCTTTCTACAATGAATCCTTCAGCTTCAAAGTCCCTCAAGAAGAACTGGAAAATGCCAGCCTAGTGTTCACAGTGTTTGGCCACAACATGAAGAGCAGCAACGACTTCATTGGCAGAATCGTCATTGGTCAGTACTCCTCCGGGCCCTCGGAGTCCAACCACTGGCGACGGATGCTCAATACCCACCGCACAGCTGTGGAGCAGTGGCACAGCCTGAGGTCCCGAGCCGAGTGTGACCGTGTGTCTCCTGCTTCCCTGGAGGTGACCTGA

Related Sequences

XP_004855856.1 Protein

Syt17 PREDICTED: synaptotagmin-17 isoform X2 [Heterocephalus glaber]

Length: 470 aa      View alignments
>XP_004855856.1
MLEPLNEGFLSRISDLLLCRWTCRHCCQKCYESSCCQSSEDEVEILGPFPAQTPPWLIASRSGDKDGDSVHTASDVPLTPRTSSPDGRRSSSDTSKSTYSLTRRISSLESRRPSSPLIDIKPIEFGILSAKKEPIQPSVLRRTYTPDDYFRKFEPQLYSLDSSSDDVDSLTDEEILSKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPIAQDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSSQNEVELGELLLSLNYLPSAGRLNVDIIRAKQLLQTDVSQGSDPFVKIQLVHGLKLVKTKKTSFLRGTIDPFYNESFSFKVPQEELENASLVFTVFGHNMKSSNDFIGRIVIGQYSSGPSESNHWRRMLNTHRTAVEQWHSLRSRAECDRVSPASLEVT