Details from NCBI annotation

Gene Symbol Abcc1
Gene Name ATP-binding cassette, sub-family C (CFTR/MRP), member 1, transcript variant X1
Entrez Gene ID 101725452

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCC1 ENSCPOG00000004872 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family C (CFTR/MRP), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004386, Guinea pig)

Protein Percentage 93.75%
CDS Percentage 91.91%
Ka/Ks Ratio 0.09117 (Ka = 0.0308, Ks = 0.3379)

ABCC1 ENSG00000103222 (Human)

Gene Details

ATP-binding cassette, sub-family C (CFTR/MRP), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000382342, Human)

Protein Percentage 88.89%
CDS Percentage 87.49%
Ka/Ks Ratio 0.07735 (Ka = 0.0525, Ks = 0.6786)

Abcc1 ENSMUSG00000023088 (Mouse)

Gene Details

ATP-binding cassette, sub-family C (CFTR/MRP), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097743, Mouse)

Protein Percentage 87.36%
CDS Percentage 83.26%
Ka/Ks Ratio 0.06535 (Ka = 0.0657, Ks = 1.005)

Abcc1 ENSRNOG00000032748 (Rat)

Gene Details

ATP-binding cassette, subfamily C (CFTR/MRP), member 1 (Abcc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041695, Rat)

Protein Percentage 86.53%
CDS Percentage 82.84%
Ka/Ks Ratio 0.06822 (Ka = 0.0692, Ks = 1.0147)

Genome Location

Sequence Coding sequence

Length: 4599 bp    Location: 449297..590321   Strand: +
>XM_004855790.1
ATGGCGCTCCGCGGCTTCTGCAGCGCGGAGGGCTCCGACTCCTTCTGGGACTGGAATGCCACGTGGTCCACCAGCAGCCCTGAGTTCACCAAGTGCTTTCAGAACACCGTCCTCGTGTGGGTGCCTTGCTGCTACCTCTGGGCCTGCTTCCCTTTCTACTTCCTGTATCTCTCCCGACATGACCGGGGCTACATTCAGATGACACACCTCAACAAAGCCAAAACTGCCTTGGGGTCCTTGCTGTGGGTTATCTGCTGGGCAGACCTCTTCTACTCTTTGTGGGAGAGAAGTCAGGGCCAGCCCGTGCCCCCAGTGTTGTTGGTCAGCCCCACCCTCTTGGGCATCACCATGCTGCTCGCCACCTTTCTAATTCAGCTCGAGAGAAGGAAGGGTGTTCAGTCCTCGGGGATCATGCTCACTTTCTGGCTTATAGCCCTACTGTGTGCCCTTGTCATCTTCAGATCCAGAGTCACAACCGCCTTAAAAGAGAGCGCCAAAGTCAGCCTGTTCCGTGATATCACGTTCTACCTGTACTTTTTCCTTGTGCTGATTCAACTTGTGTTGGCCTGTTTCTCCGACCGCTTGCCTCTGTTCTCCGAAACCATCAACGACCCCAATCCTTGCCCGGAATCCGGCGCCTCCTTCCTTTCCAGGATCACCTTCTGGTGGATCACAGGGTTGATGGTTCAAGGCTACCGGCAGCCCCTGGAGGGTGGTGACCTCTGGTCCCTGAATAAGGAGGACACATCGGAACAGGTCGTGCCTGTGTTGGTGAGGAACTGGAAGAAGGAATGTGCCAAGTGTAGGAAGCACCCCGTGAAGATGGTGTACTCCTCCTCCTCCAAGGATGCCGCCAAGCCCGAAGGGAGTTCCAAGGTGGATGTGCACGAGGAGGCTGAGTCTCTGATTGTCAAGTCCCCCCCGAGGGAGCGGGACCCCTCCCTGTTCAAAGTGCTATACAAGACCTTTGGGCCCTACTTCCTCATGAGCTTCTTGTTTAAGGCTCTTCACGACCTGATGATGTTTGCTGGCCCTGAGATCCTAAAGTTGCTCATCAACTTTGTGAATGACAAGAAGGCCCCAGACTGGCAGGGCTACTTCTACACAGCGCTGCTGTTCGTGACCGCCTGCCTGCAGACACTGGTGCTGCACCAGTACTTCCACATCTGCTTTGTCAGTGGGATGAGGATCAAGACCGCTGTCATCGGGGCTGTCTATCGCAAGGCCCTGGTGATCACCAATTCAGCCAGAAAGTCCTCCACGGTCGGGGAGATCGTCAACCTCATGTCTGTGGATGCCCAGCGGTTCATGGACTTGGCCACGTACATTAACATGATCTGGTCAGCCCCTCTGCAGGTCATCCTCGCGCTCTACCTCCTCTGGCTGAACCTGGGCCCTTCCGTCCTGGCTGGGGTGGCCGTGATGATCCTCATGGTGCCCTTTAATGCTGTGATGGCGATGAAGACTAAGACCTATCAGGTGGCCCACATGAAGAGCAAAGACAATCGGATCAGGCTGATGAATGAAATCCTCAACGGGATCAAAGTGCTGAAGCTGTATGCATGGGAGCTGGCGTTCAAGGACAAGGTGATGGCTATCAGGCAGGAGGAGCTGAAGGTGCTGAAGAAGTCTGCCTACCTGGCGGCCGTGGGGACCTTCACCTGGGTCTGCACTCCTTTCCTGGTGGCCCTGTCTACGTTTGCCGTCTACGTGACCATCGACAAGAACAACGTCCTGGATGCCCAGAGAGCCTTTGTGTCCTTGGCCTTGTTCAACATCCTCCGCTTTCCCCTGAACATCCTCCCCATGGTCATCAGCAGCATCGTGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGACCTTCCTGTCCCACGAGGAGCTGGAGCCTGGTAGCATCGAGCGGCAGCCTGTCAAAGACGCTGGGGGGACGAACAGCGTTACTGTGAAGAACGCCACGTTCACATGGGCCAGAGGCGAAGCCCCCACGCTGAATGGCATCACCTTCTCCGTCCCAGAAGGCGCTTTGGTGGCTGTGGTGGGCCAGGTGGGCTGCGGAAAATCGTCTCTGCTCTCGGCGTTCTTGGGAGAGATGGACAAGCTGGAGGGGCATGTGACTCTCAAGGGCTCGGTGGCCTATGTCCCTCAACAGGCCTGGATTCAGAACGACTCTCTCCGAGAAAACATCCTCTTTGGGCACCAGCTGCAAGAACAACACTACAAGTCTGTCGTCGAGGCCTGTGCCCTCCTCCCCGACTTGGAAATCCTGCCCAGCGGGGACCGGACCGAGATTGGCGAGAAGGGCGTGAACCTGTCCGGGGGCCAGAAGCAGCGTGTGAGCCTGGCCCGGGCCGTGTACTGTGACTCAGACATCTACCTCTTCGATGACCCCCTCTCAGCCGTGGATGCCCACGTGGGGAAGCACATTTTTGAAAACGTGATTGGCCCCAAAGGGATGCTGAAGAATAAGACTCGGATCCTGGTCACACATGGCATCAGCTACTTGCCACAGGTGGATGTCATTGTCGTCATGACTGGCGGCAAGATCTCAGAGATGGGCTCTTATCAGGAGCTGCTGGCCCGGGATGGGGCCTTCGCTGAGTTCTTGCGCACGTATGCCAGCATGGAGCAGGAGCAGGCCTCAGAGGATGACGGGGTGACAGGCATCAGTGGTCCAGGCAAGGAGCCAAAGCAAATGGAGAACGGCATGCTGGTGACGGACACCACTGGGAGGCAGCTGCAGAGGCAGCTCAGCAGCTCCTCCTCCTACAGCGGTGATGCCAGCAAGCACCACACCAGCGCCACTGAGCTGCAGAAACCCGGGGCCCAGGAGGAGAGCTGGAAGCTGATGGAGGCGGACAAGGCGCAGACGGGGCAGGTGCAGCTCTCGGTGTACTGGGACTACATGAAGGCGATCGGGCTCTTCCTCTCCTTCCTGAGCATCTTCCTCTTCCTGTGCAACCACGTCTCCTCCCTGGCTTCCAACTACTGGCTCAGTCTGTGGACGGACGACCGTGTCGTCAACGGGACCCAGGAGCACACGAATGTCCGGCTGGGCGTCTACGGAGCTCTGGGCATCTCACAAGGTGTTGCCGTGTTTGGCTACTCCATGACGGTGTCCATCGGGGGCATCTTTGCCTCCCGCCGCCTGCACCTGGACCTGCTGCACAACGTCCTCCGGTCGCCCATGAGCTTCTTTGAGCGCACCCCCAGCGGGAACCTGGTGAACCGCTTCTCCAAGGAGCTGGACACGGTGGACTCCATGATTCCTCAGGTCATCAAGATGTTCATGGGCTCCCTGTTCACCGTCCTGGGCTCCTGCATCCTCATCCTGCTGGCAACCCCCATCGCTGCTGTGGTCATCCCGCCGCTGGGCCTCATCTACTTCTTCGTGCAGAGGTTCTACGTGGCTTCCTCTCGGCAGCTAAAGCGCCTTGAGTCAGTCAGCCGCTCCCCAGTTTACTCCCACTTCAACGAGACCTTGCTGGGGGTCAGCGTCATCCGCGCCTTTGAGGAGCAGGAGCGCTTTATCCACCAGAGTGACCTGAAGGTGGATGAGAACCAGAAGGCCTACTACCCCAGCATTGTGGCCAACAGGTGGCTCGCGGTGCGACTGGAATGCGTGGGGAACTGCATCGTCCTGTTCGCCGCCCTGTTCGCAGTCATCTCCCGGAACAGCCTCAGCGCCGGCCTGGTGGGCCTCTCGGTGTCTTACTCCTTGCAGATCACCTCATACTTGAACTGGCTGGTTCGGATGTCATCCGAGATGGAGACCAACATTGTAGCCGTGGAGAGACTCAAGGAGTATTCAGAAACCGAGAAAGAGGCTCCCTGGCAAATCCAGGAGACAGCTCCACCCAGCACCTGGCCCCAGGTGGGCCAAGTGGAGTTCCGGGATTACAGCCTGCGGTACAGAGAGGACCTGGACTTGGTTCTCAAGCACATCAACTTCACCATCGAAGGGGGAGAAAAGGTGGGCATCGTGGGGCGAACAGGAGCCGGCAAGTCCTCTCTCACCCTGGGCCTGTTTCGGATGAATGAGTCCTCTGGAGGCGAGATCGTCGTCGATGGCATCAACATCGCTAAAATCGGCCTGCACAACCTGCGCTTCAAGATCACCATCATACCCCAGGACCCTGTTTTGTTCTCGGGTTCCCTCCGCATGAACCTGGACCCCTTCGCCCAGTACTCTGACGACGAAGTCTGGACAGCCCTGGAGCTGGCTCACCTGAAGGGCTTCGTGTCGGGCCTGCCGGACAAGCTGAACCATGAGTGCGCGGAAGGCGGAGAGAACCTGAGCATTGGGCAGCGCCAGCTTGTGTGCCTGGCCCGGGCTTTGCTGAGGAAGACAAAGATCCTCGTGCTGGATGAGGCCACGGCAGCCGTCGACCTGGAAACAGATGACCTCATCCAGTCCACCATCAGGACACAGTTCGAGGACTGCACGGTCCTCACCATTGCCCACCGGCTCAACACCATCATGGACTACACAAGGGTGATTGTGCTGGACAAAGGGGAAATCCGGGAGTGTGGCACCCCCTCCGACCTCCTCCAGCAGAGGGGCCTCTTCTACAGCATGGCCAGAGATGCCGGCCTGGTGTGA

Related Sequences

XP_004855847.1 Protein

Abcc1 PREDICTED: multidrug resistance-associated protein 1 isoform X1 [Heterocephalus glaber]

Length: 1532 aa     
>XP_004855847.1
MALRGFCSAEGSDSFWDWNATWSTSSPEFTKCFQNTVLVWVPCCYLWACFPFYFLYLSRHDRGYIQMTHLNKAKTALGSLLWVICWADLFYSLWERSQGQPVPPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLIALLCALVIFRSRVTTALKESAKVSLFRDITFYLYFFLVLIQLVLACFSDRLPLFSETINDPNPCPESGASFLSRITFWWITGLMVQGYRQPLEGGDLWSLNKEDTSEQVVPVLVRNWKKECAKCRKHPVKMVYSSSSKDAAKPEGSSKVDVHEEAESLIVKSPPRERDPSLFKVLYKTFGPYFLMSFLFKALHDLMMFAGPEILKLLINFVNDKKAPDWQGYFYTALLFVTACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMILMVPFNAVMAMKTKTYQVAHMKSKDNRIRLMNEILNGIKVLKLYAWELAFKDKVMAIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVYVTIDKNNVLDAQRAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRTFLSHEELEPGSIERQPVKDAGGTNSVTVKNATFTWARGEAPTLNGITFSVPEGALVAVVGQVGCGKSSLLSAFLGEMDKLEGHVTLKGSVAYVPQQAWIQNDSLRENILFGHQLQEQHYKSVVEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYCDSDIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHGISYLPQVDVIVVMTGGKISEMGSYQELLARDGAFAEFLRTYASMEQEQASEDDGVTGISGPGKEPKQMENGMLVTDTTGRQLQRQLSSSSSYSGDASKHHTSATELQKPGAQEESWKLMEADKAQTGQVQLSVYWDYMKAIGLFLSFLSIFLFLCNHVSSLASNYWLSLWTDDRVVNGTQEHTNVRLGVYGALGISQGVAVFGYSMTVSIGGIFASRRLHLDLLHNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFTVLGSCILILLATPIAAVVIPPLGLIYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRNSLSAGLVGLSVSYSLQITSYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSTWPQVGQVEFRDYSLRYREDLDLVLKHINFTIEGGEKVGIVGRTGAGKSSLTLGLFRMNESSGGEIVVDGINIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFAQYSDDEVWTALELAHLKGFVSGLPDKLNHECAEGGENLSIGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIRECGTPSDLLQQRGLFYSMARDAGLV