Details from NCBI annotation

Gene Symbol Tpm1
Gene Name tropomyosin 1 (alpha), transcript variant X8
Entrez Gene ID 101714552

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPM1 ENSCPOG00000010901 (Guinea pig)

Gene Details

tropomyosin 1 (alpha)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009794, Guinea pig)

Protein Percentage 79.58%
CDS Percentage 82.98%
Ka/Ks Ratio 0.32283 (Ka = 0.1533, Ks = 0.4749)

TPM1 ENSG00000140416 (Human)

Gene Details

tropomyosin 1 (alpha)

External Links

Gene Match (Ensembl Protein ID: ENSP00000351022, Human)

Protein Percentage 89.79%
CDS Percentage 88.62%
Ka/Ks Ratio 0.1415 (Ka = 0.0648, Ks = 0.458)

Tpm1 ENSMUSG00000032366 (Mouse)

Gene Details

tropomyosin 1, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109337, Mouse)

Protein Percentage 84.51%
CDS Percentage 83.45%
Ka/Ks Ratio 0.13003 (Ka = 0.1036, Ks = 0.797)

Genome Location

Sequence Coding sequence

Length: 855 bp    Location: 9442341..9414500   Strand: -
>XM_004855696.1
ATGGACGCCATCAAGAAGAAGATGCAGATGCTGAAGCTCGACAAGGAGAACGCCTTGGACCGAGCCGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGACCGCAGCAAGCAGCTGGAGGAGGACATCGCAGCCAAGGAGAAGCTGCTGCGGGCGTCGGAGGACGAGCGGGACCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCTCCTGGCTGCCGACGAGGCCGCCGCCAAGGCTGAAGCCGACGTAGCCTCTCTGAACAGACGCATCCAGCTGGTTGAGGAGGAGCTGGATCGTGCTCAGGAGCGCCTGGCCACAGCTTTGCAGAAGCTGGAGGAGGCTGAGAAGGCAGCAGATGAGAGTGAGAGAGGAATGAAAGTCATTGAAAGCCGAGCCCAGAAGGATGAAGAAAAGATGGAAATTCAAGAGATCCAACTGAAAGAGGCCAAACACATTGCTGAAGATGCCGACCGCAAGTATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGTGACCTGGAACGCGCAGAGGAGAGAGCCGAGCTCTCAGAAGGCCAAGTTCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAGGAAGACAAATATGAGGAAGAGATCAAGGTCCTTTCTGACAAACTGAAGGAGGCTGAGACTCGGGCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAGAAAAGCATTGATGACTTAGAAGAGAAAGTGGCTCATGCCAAGGAAGAAAACCTTAGCATGCATCAGATGCTGGATCAGACATTACTGGAGCTAAACAACATGTGA

Related Sequences

XP_004855753.1 Protein

Tpm1 PREDICTED: tropomyosin alpha-4 chain isoform X8 [Heterocephalus glaber]

Length: 284 aa     
>XP_004855753.1
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEEDIAAKEKLLRASEDERDRVLEELHKAEDSLLAADEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLELNNM