Details from NCBI annotation

Gene Symbol Pif1
Gene Name PIF1 5'-to-3' DNA helicase
Entrez Gene ID 101700455

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PIF1 ENSCPOG00000008211 (Guinea pig)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007385, Guinea pig)

Protein Percentage 90.29%
CDS Percentage 88.34%
Ka/Ks Ratio 0.12124 (Ka = 0.0567, Ks = 0.4677)

PIF1 ENSG00000140451 (Human)

Gene Details

PIF1 5'-to-3' DNA helicase

External Links

Gene Match (Ensembl Protein ID: ENSP00000268043, Human)

Protein Percentage 86.19%
CDS Percentage 85.35%
Ka/Ks Ratio 0.11304 (Ka = 0.0735, Ks = 0.6503)

Pif1 ENSMUSG00000041064 (Mouse)

Gene Details

PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049046, Mouse)

Protein Percentage 84.14%
CDS Percentage 81.48%
Ka/Ks Ratio 0.11052 (Ka = 0.094, Ks = 0.8508)

Pif1 ENSRNOG00000015878 (Rat)

Gene Details

PIF1 5'-to-3' DNA helicase (Pif1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021265, Rat)

Protein Percentage 84.62%
CDS Percentage 80.22%
Ka/Ks Ratio 0.09112 (Ka = 0.0937, Ks = 1.0279)

Genome Location

Sequence Coding sequence

Length: 1914 bp    Location: 7821705..7828317   Strand: +
>XM_004855648.1
ATGCTCGCGGGCACCGAGGAGGCAGCGGCGAAACCCGAGGACGCGGAGCTGCGGTGCCGCGTGGCCGTGGAGGAGCTAAGCCCGGGCGGGCAGCCGCGGAGGCGCGAGGCCCTCCGCAGCGCGGAGCTGAGCCTTGGCCGAAACGAGCGCCGAGAGCTGGTTCTCCGGCTGCGCGCAGCGGGCCCCGCCGGGCGATCGCGTTGCTTCCCCCTTCGAGCCGCGCGCCTCTTCACGCGCTTCGCGACGACTGGGCGCAGCGCGCTGCGGCTCTCCAACCCCGGCGCCCCACGAGCCGGCGCCACGCAGCTGCTGCTCTCCGACTGCCCCCCAGAGCGCCTGCGCCGCTTCCTGCGCACGCTGCGCCTTAAGCTGGCTGCCGCCCCGGGACCCGCTCCAGCCTCCGCGCGTGCGCAGCTGCTCGGCCCACGGCCCAGCGACTTCGTCTCCGTCAGCCCGGTGCAGCCCGAGGAGCTGCGGCGCGCGGCCGCCACGCGCGCTTCCAAGAAGCCGCTGACAGAACAGCCGGCCCCGGCCGAAGCCAGCACGGAACCCCCCAGGTGGCCACTGCCGGCTAAGAGGCTCAGCCTGCCTCCCAGCAAGCCACAGCTGTCAGAGGAGCAGGCTGCTGTGCTGAGGGTCGTCCTGAAAGGCCAGAGTGTCTTCTTCACCGGGAGTGCAGGGACTGGGAAGTCCTACCTGCTGAAGCGGATCCTGGGCTCACTGCCCCCCACAGGCACTGTGGCCACTGCCAGCACAGGGGTGGCAGCCTGCCACATTGGGGGCACCACCCTCCATGCCTTTGCAGGCATTGGCTCGGGCCAGGCCCCCCTGGCCCAGTGTGTGGCTCTGGCCCAGCGGCCAGGTGTGCGGCAGGGCTGGCTGAGCTGCCGGCGGCTGGTTATTGACGAGATCTCCATGGTGGAGGCGGACCTGTTTGATAAGCTGGAGGCCGTGGCCAGAGCTGTCCGGCAGCAGGATAAGCCATTTGGCGGGATCCAGCTCATCATCTGTGGGGACTTCCTGCAGCTGCCACCAGTCACCAAAGGCTCCCAGCCCCCTCGGTTCTGCTTCCAGGCCAAGAGCTGGAGGAAGTGTGTGCCCGTGACCCTGGAGCTGACCGAAGTGTGGAGGCAGGCAGACACTGCCTTCATCTCCCTGCTGCAGGCTGTGCGGCTGGGCAGGTGCTCTGATGAAGTGACCCGCCAGCTCAGGGCCACAGCTGCCCACAAGGTGGGGCGAGATGGCATTGTGGCCACGAGACTCTGCACCCACCAGGACGACGTGGCACTCACTAACGAGAGACGGCTGCAGGAGCTGCCGGGCGAGGTCCACAGCTTCAAGGCTCTGGACAGCCACCCTGAGCTAGCTCGGACCCTGGACGCCCAGTGTCCTGTGAGCTGGCTTCTGCAGCTGAAGCTGGGTGCACAGGTGATGCTGGTGAAGAACCTGGCAGTATCCCGAGGCCTGGTGAATGGAGCCCGAGGGGTGGTGGTGGGGTTTGAAGCCGAGGGCAGAGGGCTGCCCCGGGTGCGCTTCCTGTGCGGCGTCACTGAGGTCATCCGTGTGGACCGCTGGACAGTGCAGGCCACCGGGGGCCAGGTCCTCACCCGGCAGCAGCTGCCCCTCCAGCTGGCGTGGGCCCTGTCCATCCACAAGAGCCAGGGCATGTCTCTCGACTGTGTGGAGATCTCTCTGGGCCGGGTGTTTGCCAGTGGACAGGCCTATGTGGCCCTCTCCCGGGCCTGCAGCCTGCAGGGCCTGCGAGTGTTGGACTTTGACCCCTTGGTGGTCCGCTGTGATGCCCGTGTGCTTCGTTTCTATGCTACCCTGCAGCGGAGCAGGGGCCTCCGTCTGGAGTCCCCGTATGACGAGGAGCCAGCCTCGGACCAGGAGAATATGGACCCAAACCGCTGA

Related Sequences

XP_004855705.1 Protein

Pif1 PREDICTED: ATP-dependent DNA helicase PIF1 [Heterocephalus glaber]

Length: 637 aa      View alignments
>XP_004855705.1
MLAGTEEAAAKPEDAELRCRVAVEELSPGGQPRRREALRSAELSLGRNERRELVLRLRAAGPAGRSRCFPLRAARLFTRFATTGRSALRLSNPGAPRAGATQLLLSDCPPERLRRFLRTLRLKLAAAPGPAPASARAQLLGPRPSDFVSVSPVQPEELRRAAATRASKKPLTEQPAPAEASTEPPRWPLPAKRLSLPPSKPQLSEEQAAVLRVVLKGQSVFFTGSAGTGKSYLLKRILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAQRPGVRQGWLSCRRLVIDEISMVEADLFDKLEAVARAVRQQDKPFGGIQLIICGDFLQLPPVTKGSQPPRFCFQAKSWRKCVPVTLELTEVWRQADTAFISLLQAVRLGRCSDEVTRQLRATAAHKVGRDGIVATRLCTHQDDVALTNERRLQELPGEVHSFKALDSHPELARTLDAQCPVSWLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPRVRFLCGVTEVIRVDRWTVQATGGQVLTRQQLPLQLAWALSIHKSQGMSLDCVEISLGRVFASGQAYVALSRACSLQGLRVLDFDPLVVRCDARVLRFYATLQRSRGLRLESPYDEEPASDQENMDPNR