Details from NCBI annotation

Gene Symbol Spg21
Gene Name spastic paraplegia 21 (autosomal recessive, Mast syndrome), transcript variant X2
Entrez Gene ID 101696663

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPG21 ENSCPOG00000012234 (Guinea pig)

Gene Details

spastic paraplegia 21 (autosomal recessive, Mast syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011005, Guinea pig)

Protein Percentage 98.7%
CDS Percentage 95.35%
Ka/Ks Ratio 0.03476 (Ka = 0.0062, Ks = 0.177)

SPG21 ENSG00000090487 (Human)

Gene Details

spastic paraplegia 21 (autosomal recessive, Mast syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSP00000204566, Human)

Protein Percentage 98.7%
CDS Percentage 92.53%
Ka/Ks Ratio 0.01789 (Ka = 0.006, Ks = 0.3371)

Spg21 ENSMUSG00000032388 (Mouse)

Gene Details

spastic paraplegia 21 homolog (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034955, Mouse)

Protein Percentage 97.4%
CDS Percentage 87.88%
Ka/Ks Ratio 0.0218 (Ka = 0.0137, Ks = 0.6273)

Spg21 ENSRNOG00000015019 (Rat)

Gene Details

spastic paraplegia 21 homolog (human) (Spg21), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039361, Rat)

Protein Percentage 96.55%
CDS Percentage 89.66%
Ka/Ks Ratio 0.03896 (Ka = 0.0193, Ks = 0.4953)

Genome Location

Sequence Coding sequence

Length: 927 bp    Location: 7520139..7548314   Strand: +
>XM_004855638.1
ATGGGAGAGATTAAAGTCTCTCCTGATTATAACTGGTTTAGAAGTACAGTTCCCCTTAAAAAGATTATCGTAGATGATGATGACAGTAAAATATGGTCGCTCTACGATGCGGGTCCCAGAAACATCAGGTGTCCTCTCATATTTCTGCCTCCTGTCAGTGGAACGGCGGATGTATTTTTCCGGCAGATTTTGGCTTTGACTGGATGGGGTTACCGGGTTATAGCTTTGCAGTATCCAGTTTATTGGGACCACCTTGAATTCTGTGATGGATTCAGAAAACTTCTAGATCATTTACAACTGGATAAAGTCCATCTGTTTGGGGCTTCTTTGGGAGGCTTTTTAGCCCAGAAATTTGCTGAATACACTCACAAATCTCCTAGAGTCCATTCCCTCATTCTCTGCAATTCCTTCAGTGACACCTCCATCTTCAACCAGACTTGGACTGCGAACAGCTTTTGGCTGATGCCTGCATTTATGCTCAAAAAAATAGTTCTTGGAAACTTTTCATCTGGCCCAGTGGACCCTATGATGGCTGATGCCATTGATTTCATGGTGGACAGGCTGGAAAGTCTGGGTCAGAGTGAACTGGCTTCAAGACTGACCCTGAATTGTCAGAATTCTTATGTGGAACCTCATAAAATTCGGGACATTCCTGTAACCATTATGGATGTGTTTGACCAAAGCGCACTTTCAACTGAAGCTAAAGAAGAAATGTACAAATTGTACCCTAACGCCCGGAGAGCGCACCTTAAAACAGGAGGCAACTTCCCCTACCTGTGCAGAAGCGCAGAGGTGAATCTTTACGTACAGATACATTTGCTGCAATTCCACGGAACCAAATATGCTGCCATTGACCCATCCATGGTCAGTGCGGAGGAGCTGGAGGTGCAGAAGGGCAACCTCAGCATCAGCCAGGAGGAGCAGTAG

Related Sequences

XP_004855695.1 Protein

Spg21 PREDICTED: maspardin isoform X2 [Heterocephalus glaber]

Length: 308 aa      View alignments
>XP_004855695.1
MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRNIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSMVSAEELEVQKGNLSISQEEQ