Details from NCBI annotation

Gene Symbol Lrrc49
Gene Name leucine rich repeat containing 49, transcript variant X6
Entrez Gene ID 101725318

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC49 ENSCPOG00000001630 (Guinea pig)

Gene Details

leucine rich repeat containing 49

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001470, Guinea pig)

Protein Percentage 95.34%
CDS Percentage 94.46%
Ka/Ks Ratio 0.14965 (Ka = 0.0231, Ks = 0.1542)

LRRC49 ENSG00000137821 (Human)

Gene Details

leucine rich repeat containing 49

External Links

Gene Match (Ensembl Protein ID: ENSP00000453273, Human)

Protein Percentage 92.12%
CDS Percentage 91.14%
Ka/Ks Ratio 0.13899 (Ka = 0.039, Ks = 0.2805)

Lrrc49 ENSMUSG00000047766 (Mouse)

Gene Details

leucine rich repeat containing 49

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070606, Mouse)

Protein Percentage 88.78%
CDS Percentage 84.55%
Ka/Ks Ratio 0.08761 (Ka = 0.0582, Ks = 0.6641)

Lrrc49 ENSRNOG00000012015 (Rat)

Gene Details

leucine rich repeat containing 49 (Lrrc49), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016491, Rat)

Protein Percentage 89.5%
CDS Percentage 85.37%
Ka/Ks Ratio 0.08572 (Ka = 0.0536, Ks = 0.6256)

Genome Location

Sequence Coding sequence

Length: 2061 bp    Location: 2990277..2848623   Strand: -
>XM_004855550.1
ATGATTCCAGGGAAATACCGCTCTGTTTCTGGCCGGGCTGCAAACAGCATGAACTGTGGGCTTCATCTGGTCATTCAAACATCATCGCTTCCCGAAAAAAACAAGGTTGAATTCAAACTTAATAGAGATACATCATCATTTCCTGGTAGACTCTTACAACATGACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAGCTCATCAATGCCATCATTTCCTATTCTTCAACGTTCTTCCGAAGAGAAAATTCTTTGCTCAGACAGGTTGACCCTAGAAAGGCAAAAGCTGACTGTATGTCCTATCATCGATGGAGAAGAACACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACTCGGATCCAAAACATTTCTAATCTACAGAGGTTAATATTTTTGGATTTATATGACAACCAGATTGAAGAAATTAGTGGGCTTTCTACTCTGAGATCCCTCCGTGTTCTTCTGTTGGGGAAAAACAGAATCAAGAAAATCTCAAATCTGGAGAATCTAAAAAACTTAGATGTTTTGGACCTTCATGGAAATCAGATTACCAAAATTGAAAATGTCAATCATTTGTGTGATTTGAGAGTTTTAAATCTTGCCAGGAACCTTTTAAGTCATGCTGATAATCTTAATGGGCTGGATTCACTCACTGAACTTAACCTGCGACACAATCAAATCACTTTTGTGAGAGATGTGGATAATTTGCCTAGCCTCCAACGTCTGTTTCTTAGCTTCAACAATATATCTAGTTTTGACAGTGTTTCCTGCCTTGCTGACTCTACTTCCCTCTCAGACATCACTTTTGATGGCAACCCAATAGCTCAAGAGTCATGGTACAAACACACTGTACTTCAAAATATGACACAGCTGCGCCAGCTGGATATGAAGAGAATCACGGAAGAAGAAAGGCGTATGGCATCTGTTGTAGCCAAAAAAGAAGAAGAGAAGAAGCGGGAAAGTCAGAAGCAGATTTTGCTTAAGGAAAAGAAAAGGTTAACAATTGACAACGTAGCTCGACACTGGGACTTGCAACAACGAGTAGCCAACAATGCTCCAAATCAAGATCGAAAAGATTCTGCCTCTCCCCATCAGGACCCCTGCCAGATGGAGGGAAGCACCATCTCTCCATTTCCAGAGGACACAGGGGCTGTTGACTCAGGACTCACCAGTGCTTTGCAGGGCTTGTCTGTCATAGACACACACCTCGTTGAAGTGGACGGGGACACTCTCTCCCTTTATGGCTCAGGGGCCCTAGAATCTTTGGACCGGAACTGGAGTGTTCAGACAGCAGGGATGATCACAACAGTCTCCTTCACCTTCATAGAATTCGATGAAATTGTCCAAGTGCTACCCAAATTGAAGATTAAATTTCCTAATCCTCTGCACCTTAAATTCAAGGAGACAAACCTTGTGATGCTACAGCAGTTTAATGCACTAGCACAGCTTCGTCGTATTGACCAGTTGACAGTTGACCCTCAAGGAAATCCAGTTGTCAGTTTTACACTCTGGAAATACTATGTACTGTTTAGGCTGAGCCATTTTAGTATGCAGAAAATAAATGGAACAGAGGTGACCCAGAACGATACGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCCTCTGAGTTACCTCAGTACCGTCTGATTTCAATTCTGGGGGATGCCAGGAAAAAGCAGTTCCAGTATCTACTAGAAACCAAAGGGAAAAAACCTGTTATTGTCAATGAGGAAAATAATGACAGCAAAAGACTTGTAGGAGAAAACACAAATCGTGCTACACTAAATTATACCACAAGAGAATTTTATAATGAAAAGTTAGAGGATATAAAAGAAAAAAAGAAATTCTGCAAGATGTACATAGAGGACCTTATGAAGGAAGCCACAGAAATCAATATGAAGCATGAAGCTCTGCAGAAACTTTGGCCACAGATGTTCATTGAACTTGTGAGGGACGCAGTCATAGAAATCCACAATAAGAACTCCTACATGAAGCTCTGCCTGCAGCAGATAACTGATCAAAAATAG

Related Sequences

XP_004855607.1 Protein

Lrrc49 PREDICTED: leucine-rich repeat-containing protein 49 isoform X6 [Heterocephalus glaber]

Length: 686 aa      View alignments
>XP_004855607.1
MIPGKYRSVSGRAANSMNCGLHLVIQTSSLPEKNKVEFKLNRDTSSFPGRLLQHDLERNYSSRQGDHINLVSSSMPSFPILQRSSEEKILCSDRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHADNLNGLDSLTELNLRHNQITFVRDVDNLPSLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQESWYKHTVLQNMTQLRQLDMKRITEEERRMASVVAKKEEEKKRESQKQILLKEKKRLTIDNVARHWDLQQRVANNAPNQDRKDSASPHQDPCQMEGSTISPFPEDTGAVDSGLTSALQGLSVIDTHLVEVDGDTLSLYGSGALESLDRNWSVQTAGMITTVSFTFIEFDEIVQVLPKLKIKFPNPLHLKFKETNLVMLQQFNALAQLRRIDQLTVDPQGNPVVSFTLWKYYVLFRLSHFSMQKINGTEVTQNDTIMAERLFGILAHVASSELPQYRLISILGDARKKQFQYLLETKGKKPVIVNEENNDSKRLVGENTNRATLNYTTREFYNEKLEDIKEKKKFCKMYIEDLMKEATEINMKHEALQKLWPQMFIELVRDAVIEIHNKNSYMKLCLQQITDQK