Sequence details NCBI ID: XM_004855516.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Neo1
Gene Name neogenin 1, transcript variant X6
Entrez Gene ID 101715485

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NEO1 ENSCPOG00000005857 (Guinea pig)

Gene Details

neogenin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005285, Guinea pig)

Protein Percentage 96.88%
CDS Percentage 94.77%
Ka/Ks Ratio 0.10206 (Ka = 0.0165, Ks = 0.162)

NEO1 ENSG00000067141 (Human)

Gene Details

neogenin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000341198, Human)

Protein Percentage 95.45%
CDS Percentage 92.71%
Ka/Ks Ratio 0.09816 (Ka = 0.0234, Ks = 0.2387)

Neo1 ENSMUSG00000032340 (Mouse)

Gene Details

neogenin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000063656, Mouse)

Protein Percentage 94.0%
CDS Percentage 89.95%
Ka/Ks Ratio 0.08911 (Ka = 0.0319, Ks = 0.3578)

Neo1 ENSRNOG00000006490 (Rat)

Gene Details

Neogenin

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060347, Rat)

Protein Percentage 94.67%
CDS Percentage 90.09%
Ka/Ks Ratio 0.07378 (Ka = 0.0276, Ks = 0.3737)

Genome Location

Sequence Coding sequence

Length: 4353 bp    Location: 1227488..1021463   Strand: -
Raw sequence   
>XM_004855516.1
ATGGCGGCAGAGCGGGGGGCCCGGCGGCGCCTGAGCGCCTCCTGCTTCTGGCTGAGTTGCCTGCTGCTGCTGCTCGCGCGCCGGGCGCCGGGCGCCGGGGCTGCCAGGAGCGGGACTCCGCCGCGGTCCGCAGGTGCCAATGTTCGAACATTCACTCCATTTTATTTTCTGGTGGAGCCAGTGGATACACTCTCAATTAGAGGCTCTTCTGTTGTATTAAACTGTTCAGCATATTCTGAACCTTCTCCAAAAATTGAATGGAAAAAAGATGGAACTTTTTTAAACTTAATATCAGATGATCGACGCCAGCTTCTCCCAGATGGATCTTTATTTATTAGCAATGTGGTGCATTCCAAACACAATAAACCAGATGAAGGTTACTATCAGTGTGTGGCCACTGTTGATAGTCTTGGAACTATTGTTAGTAAAACAGCCAAACTCACAGTAGCAGGTCTTCCAAGATTTACCAGCCAGCCAGAACCTTCCTCTGTGTATGCTGGAAATAGCGCAGTTCTAAATTGTGAAGTTAATGCAGACTTGGTCCTATTTGTGAGGTGGGAACAGAACAGACAGCCCCTTCTTCTGGATGATAGAATTATCAGGCTTCCAAGTGGGACACTGGTGATCAGCAATACGACTGAAGGAGATGGGGGACTGTATCGCTGCATAGTTGAAAGTGGTGGGCCACCAAAGTATAGTGATGAAGCTGAATTGAAGATTCTTCCAGATTCAGAGGAAACACCAAACTTAGTATTTTTGAAACAGCCTTCTTCCTTAGTCAGAGTCATTGGTCAGAGTGCAGTGTTGCCATGTGTTGCTTCAGGACTTCCTGCTCCAACCATTAGATGGATGAAAAATGAGGAGGCGCTCGACATAGAAAGCTCTGAAAGATTGGTCTTGCTGGCAGGTGGTAGCCTGGAGATCAGTGATATCACTGAGGATGATGCGGGGACTTATTTTTGTATAGCTGATAATGGAAATGACACAATTGAAACTCAAGCAGAGCTTACAGTACAAGCTCAGCCTGAATTCCTGAAACAACCTGCTAATATATATGCGCATGAATCCATGGATATTATATTTGAATGCGAAGTGACTGGAAAGCCAACCCCAACTGTGAAGTGGGTCAAGAATGGGGATATGGTTATTCCAAGTGATTACTTTAAGATTGTAAAGGAACATAATCTTCAAGTTTTGGGTCTGGTGAAGTCAGATGAAGGGTTCTATCAATGTATTGCTGAGAATGATGTTGGAAATGCGCAAGCTGGAGCCCAGCTGATAATCCTTGAACATGCACCAGCCACAGCGGGACCACTGCCTTCAGCGCCTCGAGATGTTGTGGCCTCCCTTGTTTCTACCCGCTTCATCAAACTGACGTGGCGGACACCTGCATCTGATCCTCATGGGGACAACCTCACCTACTCTGTGTTCTACACCAAGGAAGGCATTGCTAGGGAGCGTGTTGAGAATACTAGTCGCCCAGGAGAGATGCAGGTAACCATTCAAAACCTAATGCCAGCGACCGTGTACATCTTCAGAGTTGTGGCTCAAAATAAGCATGGCTCCGGAGAGAGTTCAGCTCCATTACGAGTAGAAACACAGCCTGAAGTTCAGCTCCCTGGCCCTGCACCTAACATCCGAGCTTATGCAGCGTCACCTACTTCAATCACTGTCACATGGGAAACACCAGTGTCTGGCAATGGGGAAATTCAGAATTACAAATTGTACTACATGGAAAAAGGGACTGATATCGAGCAGGATGTTGACGTTTCAAGTCATTCTTACACCATGCATGGTTTGAAAAAATATACAGAGTATAGTTTCCGAGTGGTGGCCTACAATAAACATGGTCCTGGAGTCTCCACACAGGATGTTGCTGTTCGCACATTGTCAGATGTTCCCAGTGCTGCTCCTCAGAATCTGACATTAGAAGTGAGAAATTCAAAGAGTATTATAATTCACTGGCAGCCACCTTCTCTAGCCACACAAAACGGGCCAATTACTGGCTACAAGATTCGCTACCGAAAGGCCTCCCGCAAAAGTGATGTTACTGAGACCTTGGTAACTGGGACACAGCTGTCTCAGCTGATTGAAGGTCTTGATCGGGGGACTGAATATAATTTCCGAGTGGCTGCTCTAACAGTCAATGGTACAGGCCCAGCAACTGACTGGCTGTCTGCTGAAACTTTTGAAAGTGACTTAGATGAAACTCGTGTTCCTGAGGTGCCAAGCTCTCTTCACGTTCGCCCACTTGTCACTAGCATTGTAGTAAGCTGGACTCCACCAGAGAATCAGAACATTGTGGTGAGAGGTTATGCCATTGGTTATGGCATTGGTAGTCCTCATGCTCAGACTATCAAAGTGGACTATAAACAACGCTATTATACCATCGAAAATCTGGATCCAAGCTCTCACTATGTGATTACCCTGAAAGCATTTAACAATGTGGGTGAAGGCATCCCCCTATATGAGAGTGCCGTGACCAGGCCACACACAGACACTTCTGAAGTTGATTTATTTGTTATTAATGCTCCATACACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCATTCTGAGTCATGACACCATAAGGATCACATGGGCAGACAACTCCCTGCCCAAACACCAGAAGATTACAGACTCCCGGTACTACACAGTCCGATGGAAAACCAACATCCCAGCAAACACCAAGTACAAGAATGCAAATGCAACAACATTAAGTTATTTGGTGACTGGTTTAAAACCAAACACCCTCTATGAATTCTCTGTGATGGTGACTAAAGGGCGAAGATCAAGCACGTGGAGTATGACAGCACATGGGACCACCTTTGAATTGGTTCCTACTTCTCCACCTAAGGATGTGACAGTTGTAAGTAAAGAGGGAAAACCTAGGACCATAATTGTGAATTGGCAGCCTCCCTCTGAAGCCAATGGCAAAATAACAGGCTACATCATATATTACAGTACAGATGTGAATGCGGAGATACATGACTGGGTTATTGAGCCTGTGGTGGGAAACAGATTGACTCACCAGATTCAAGAGCTAACACTTGATACTCCATATTACTTCAAAATCCAGGCCCGGAACTCAAAGGGCATGGGGCCCATGTCTGAAGCTGTGCAATTCAGAACACCTAAAGCCTCAGGGTCTGCAGGAAAAGGAAGCCGGCTGCCAGACCTAGGACATGACTACAAACCTCCAATGAGTGGCAGCAACAGCCCTCATGGGAGCCCCTCTCCTCTAGACAGCAATATGCTGCTGGTCATCATTGTTTCTGTTGGCATCATCACCATTGTGGTGGTTGTGATCATTGCTGTCTTTTGTACTCGGCGAACCACCTCTCACCAGAAAAAGAAACGAGCTGCCTGTAAATCAGTGAATGGCTCCCACAAATATAAAGGGAACTCCAAAGATGTCAAACCTCCAGACCTCTGGATCCATCACGAGAGACTAGAGCTGAAACCCATTGACAAGTCTCCAGACCCAAACCCCATCATGACCGATACTCCCATTCCTCGCAACTCTCAAGACATCACACCAGTGGACAATTCCATGGACAGCAATATCCATCAAAGGCGGAACTCATACAGAGGGCACGAATCAGAGGACAGCATGTCTACACTGGCTGGAAGGCGGGGGATGAGACCAAAAATGATGATGCCTTTTGACTCTCAGCCACCCCAGCCTGTGATTAGTGCCCATCCCATCCATTCCCTCGATAACCCTCACCATCATTTCCACTCCAGCAGCCTCGCTTCTCCAGCTCGCAGTCATCTCTACCACCCAGGCAGCCCATGGCCCATTGGCACATCCATGTCCCTTTCAGACAGGGCCAATTCTACAGAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCAGCTTCCTCATCTCAAACATGCTGTACTGACCATCAGGATCCTGAAGGTGCTACCAGCTCCTCCTACTTGGCCAGCTCCCAAGAGGAAGACTCAGGCCAGAGTCTTCCCACAGCCCACGTTCGCCCTTCGCACCCGTTGAAGAGCTTCGCGGTGCCCGCAATCCCGCCCCCAGGACCTCCCACTTATGATCCTGCATTGCCAAGCACACCATTACTGTCCCAGCAAGCTCTGAACCATCACGTTCACTCAGTGAAGACAGCCTCCATCGGGACTTTAGGAAGGAGCCGGCCTCCTATGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACGAGGATGCTGGAAGACTCTGAGAGTAGTTATGAACCAGATGAGCTGACCAAAGAGATGGCCCACCTGGAAGGACTAATGAAGGACCTAAATGCCATCACAACAGCATGA

Related Sequences

XP_004855573.1 Protein

Neo1 PREDICTED: neogenin isoform X6 [Heterocephalus glaber]

Length: 1450 aa      View alignments
>XP_004855573.1
MAAERGARRRLSASCFWLSCLLLLLARRAPGAGAARSGTPPRSAGANVRTFTPFYFLVEPVDTLSIRGSSVVLNCSAYSEPSPKIEWKKDGTFLNLISDDRRQLLPDGSLFISNVVHSKHNKPDEGYYQCVATVDSLGTIVSKTAKLTVAGLPRFTSQPEPSSVYAGNSAVLNCEVNADLVLFVRWEQNRQPLLLDDRIIRLPSGTLVISNTTEGDGGLYRCIVESGGPPKYSDEAELKILPDSEETPNLVFLKQPSSLVRVIGQSAVLPCVASGLPAPTIRWMKNEEALDIESSERLVLLAGGSLEISDITEDDAGTYFCIADNGNDTIETQAELTVQAQPEFLKQPANIYAHESMDIIFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHAPATAGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSRPGEMQVTIQNLMPATVYIFRVVAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDIEQDVDVSSHSYTMHGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLTLEVRNSKSIIIHWQPPSLATQNGPITGYKIRYRKASRKSDVTETLVTGTQLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKASGSAGKGSRLPDLGHDYKPPMSGSNSPHGSPSPLDSNMLLVIIVSVGIITIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPGSPWPIGTSMSLSDRANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPSTPLLSQQALNHHVHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA