Details from NCBI annotation

Gene Symbol Loxl1
Gene Name lysyl oxidase-like 1, transcript variant X2
Entrez Gene ID 101710365

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LOXL1 ENSCPOG00000006062 (Guinea pig)

Gene Details

lysyl oxidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005472, Guinea pig)

Protein Percentage 92.83%
CDS Percentage 90.44%
Ka/Ks Ratio 0.06671 (Ka = 0.0338, Ks = 0.5064)

LOXL1 ENSG00000129038 (Human)

Gene Details

lysyl oxidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000261921, Human)

Protein Percentage 88.12%
CDS Percentage 87.23%
Ka/Ks Ratio 0.07472 (Ka = 0.0562, Ks = 0.7525)

Loxl1 ENSMUSG00000032334 (Mouse)

Gene Details

lysyl oxidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057406, Mouse)

Protein Percentage 87.76%
CDS Percentage 83.22%
Ka/Ks Ratio 0.05236 (Ka = 0.0619, Ks = 1.1828)

Loxl1 ENSRNOG00000008680 (Rat)

Gene Details

lysyl oxidase-like 1 (Loxl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032184, Rat)

Protein Percentage 87.93%
CDS Percentage 82.7%
Ka/Ks Ratio 0.056 (Ka = 0.0656, Ks = 1.1712)

Genome Location

Sequence Coding sequence

Length: 1758 bp    Location: 537612..518711   Strand: -
>XM_004855495.1
ATGGCTCTGGGCCGCGCGGGCTGGAGGCTGGGGGCGCTGGTGTGGGGCGCGTGGCTATGCGTCCTGGCGCATGGGCAGCAGGCTCAGCAGCCCGGGCAGGGCTCAGACCAGGACTCGGACCTGGGGCGCTGGCGACAGCTGATCCAATGGGAGAACAACGGACAGGTGTACAGCCTGCTCAACTCGGGCTCCGAGTACGTGCCGGCTGGGCCCCGGCACGCCCAGAGTAGCTCTCGGGTGCTGCTGGCTAGTGCACCCCAGGCCCCTCCACGCCGCAGCCAGGGGGGTCTCCAGCGCCGCCAGGCGCCGTCGCTGCCCCTGCCTGGACGCGTGGGCTCCGACACCGTGCGCGGCCAAGCGCGACACCCATTCGGCTTCGGCCAGGTGCCCGACAACTGGCGCGAGGTGGCCGTCGGGGACAGCATGGGCATGGCCCGCGCCCGGACCTCCGTCTCTCAGCAACGGCCCGGGGGCTCCGCCTCCTCGGTCTCGGCCTCAGCTTTCGCCACCGCCTACCGCCAAGCGCCCTCCTACCCACAGCAGATCCCCTACCCACAGGCGCCCTTTGTCGCCCAGTACGAGAACTACGACCCCGCGGCGCGCACCTACGACCAGGGTTTCGTATACTATAGGAGCGGGAGCTCAGGTGGGGCGGCTGTGGCCTCGGCGGGGGTGCTGTACCCGTTCCCACCCCGCACGCGCTACGAGGAGTACGGCGAGGAGCAGCCCGAGTACGCGGCCCAGGGCTTCTACCCTGCTCCTGAGCGTCCGTATGCGCCGCAGCCGCAGCCGCAGCCACAACCTCAGCCCCCGCCCCCCGACGGCCTGGATCGTCGCTTTGCGCACAGCCTGTACAGCGAGGGCGCAGCGGGCGCAGAGCAGGCCTTCCCAGACCCCGCGCTTGACACCGCCCAGGGCCCGCGCCTCGGCTGGTTCCAGCCCTATGCCAATGTGCCGCCCGAGGCCTACGCCCCGCCGCGAGCTGTGGAGCAACAGCCCCCATTCCGCGTGCTCGAGCCCCCCTACCTGCCGGTGCGCAGCTCTGACGGGTCCCAGCCCGGGGCGGAGCGCAATGGTGCACAGCAAGGCCGCCTTAGTGTGGGCAGCGTGTTCCGACCCAGCCAGAACGGGCGCGGTCTCCCTGACTTGGTCCCAGACCCCAACTATGTGCAGGCATCCACATACGTGCAGAGAGCTCATCTATACTCCCTGCGCTGTGCTGCGGAGGAGAAGTGCCTCGCCAGCACAGCCTATGCCCCGGGGGCCACCGACTACGACCTGCGGGTGCTGCTGCGCTTCCCCCAGCGTGTGAAGAACCAGGGCACAGCAGACTTCCTCCCCAACCGGCCTCGGCACACCTGGGAGTGGCACAGCTGCCACCAACATTACCACAGCATGGATGAGTTCAGCCACTATGACCTCCTGGATGCAGCCACGGGCAAGAAGGTGGCTGAGGGCCACAAGGCCAGCTTCTGCCTGGAGGACAGCACCTGTGACTTTGGGAACCTCAAGCGCTATGCGTGCACCTCTCACACACAGGGCCTGAGTCCTGGCTGCTATGACACCTACAACGCAGATATCGACTGCCAGTGGATTGACATAACCGACGTGCAGCCTGGGAACTACATCCTCAAGGTGCACGTGAACCCTAAGTACATCGTCTTGGAGTCCGACTTCACCAACAATGTGGTGAGGTGCAACATCCACTACACAGGTCGCTATGTTTCCACCACAAACTGCAAAATTGTCCAATCCTGA

Related Sequences

XP_004855552.1 Protein

Loxl1 PREDICTED: lysyl oxidase homolog 1 isoform X2 [Heterocephalus glaber]

Length: 585 aa      View alignments
>XP_004855552.1
MALGRAGWRLGALVWGAWLCVLAHGQQAQQPGQGSDQDSDLGRWRQLIQWENNGQVYSLLNSGSEYVPAGPRHAQSSSRVLLASAPQAPPRRSQGGLQRRQAPSLPLPGRVGSDTVRGQARHPFGFGQVPDNWREVAVGDSMGMARARTSVSQQRPGGSASSVSASAFATAYRQAPSYPQQIPYPQAPFVAQYENYDPAARTYDQGFVYYRSGSSGGAAVASAGVLYPFPPRTRYEEYGEEQPEYAAQGFYPAPERPYAPQPQPQPQPQPPPPDGLDRRFAHSLYSEGAAGAEQAFPDPALDTAQGPRLGWFQPYANVPPEAYAPPRAVEQQPPFRVLEPPYLPVRSSDGSQPGAERNGAQQGRLSVGSVFRPSQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPGATDYDLRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSTTNCKIVQS