Details from NCBI annotation

Gene Symbol Arid3b
Gene Name AT rich interactive domain 3B (BRIGHT-like), transcript variant X2
Entrez Gene ID 101701755

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARID3B ENSCPOG00000012901 (Guinea pig)

Gene Details

AT rich interactive domain 3B (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011613, Guinea pig)

Protein Percentage 92.52%
CDS Percentage 91.06%
Ka/Ks Ratio 0.14523 (Ka = 0.0386, Ks = 0.2658)

ARID3B ENSG00000179361 (Human)

Gene Details

AT rich interactive domain 3B (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSP00000343126, Human)

Protein Percentage 88.25%
CDS Percentage 88.07%
Ka/Ks Ratio 0.16696 (Ka = 0.0612, Ks = 0.3668)

Arid3b ENSMUSG00000004661 (Mouse)

Gene Details

AT rich interactive domain 3B (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130173, Mouse)

Protein Percentage 84.96%
CDS Percentage 84.72%
Ka/Ks Ratio 0.17784 (Ka = 0.0852, Ks = 0.4793)

Arid3b ENSRNOG00000019677 (Rat)

Gene Details

AT rich interactive domain 3B (Bright like) (Arid3b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062477, Rat)

Protein Percentage 85.56%
CDS Percentage 85.14%
Ka/Ks Ratio 0.17091 (Ka = 0.0806, Ks = 0.4716)

Genome Location

Sequence Coding sequence

Length: 1680 bp    Location: 119496..65588   Strand: -
>XM_004855465.1
ATGGAGCCGATGCAGCAACAGCAACAGAAGCAGTCACATCTGGCTCCTCTGCAGATGGATGCCCGAGAGAAGCAGGGACAGCCGATGAAAGAAGCCCAGTTCCTATATCCCCAAAAGCTAGTCACACAGCCTACTCTTCTTTCTGCCACACCTGGAAGACCTGCCAGCAGCCCTGCCCTGGGTCCCTTAGCCAGAGTTTCACCAGCCACACCAGTGGCCCGAGTTTTTGAACGGAGCAACGTGAACTCAGAGCCTGAGGAAGAGGAAGGAGGTTTGGAAGATGAGGATGGGGATGATGATGTTGCAGAGGTGGCTGAAAAAGAGGCCCAGGCTGCTTCCAAGTATTTTCACGTGCAGAAAGCAGCTCGCCAAGACCCCCGAGCAGCACCCATGTCCAGTCTGCTTCCAGCACCAGGGCTCCCCCAACATGGACAACAAACTAAAGAAGACCTTACCAAAGATGCTTCCAAGGGTCCACCTTCTGTTTCCATGGCTGGGCAGCCAACCTGGAATCCGGAGGAGCAGCTTAAACAGAATGGTGGTTTGGCCTGGAGTGATGATGCTGATGGAGGCCGGGGAAGAGAGATTTCCCGAGATTTTGCCAAGCTCTATGAACTAGATGGTGATCCTGAAAGGAAGGAGTTCCTAGATGACCTCTTCATCTTTATGCAGAAGAGGGGAACCCCCATCAACCGGATCCCCATCATGGCCAAGCAGATCCTGGACCTGTACATGCTGTACAAGCTGGTGACAGAGAAAGGAGGCCTGGTGGAGATCATCAACAAGAAGATCTGGAGGGAGATCACCAAAGGCCTGAACCTGCCCACTTCCATCACCAGCGCCGCCTTCACCCTCAGGACCCAGTACATGAAGTATCTCTATGCCTATGAGTGTGAGAAGAAGGCCCTGAGCTCCCCTGCTGAGCTGCAGGCTGCCATCGACGGCAACCGCAGGGAGGGCAGGCGGCCCAGCTACAGCTCCTCCCTCTTCGGCTACTCACCCACTGCTGCCACTGCTGCTGCTGCTGGGCCCCCTGCTCTTCTCTCACCACCCAAGATCCGCTTCCCAGTCCTGGGGCTTGGTTCCAGCAGTGGCACCAGTGCCAGTGGCCCTCGGCTGTCCCCAGCAGCCACTCTCAGGAAAGGTGACGGGGTCCCCACAACCACAGTGCCCGTGCCAAATCGCCTGGCTGTGCCCGTAGCTCTGGCAGGGCCACAGACAGGGAGTCGGGTGGCCGCATTGGAACAGCTGCGGGAGCGTCTAGAGTCAGGGGAGCCAGCGGAGAAGAAGGCAGCAAGGCTGTCGGAGGAGGAGCAGCGCCTGGTACAGCAGGCCTTCCAGCGTAACCTTTTCAGCATGGCACGGCAGCTGCCTGTGAAGATCCGCATCAACGGCAGGGAAGACAGAGGAGAGGCCTCAGCTGCTGCGCTGAACCTGACCCCAAGCAGCATTGGAAGCATTAACATGTCTGTGGACATCGACGGCACCACCTATGCAGGTGTGCTGTTTGCCCAGAAGCCCGTGGTCCACCTCATCACAGGCCCCACTGCCCAGAGTGTGGTTGGCAGCAGTTCTGGCGGCGGCAGCAGCAGCAGCAGCGGTGGCTCTCACTGCTCACAGAGTCCTACCTCGTCCCGGGGCACCCCCAGTGCGGAGCCCTCTACCAGCTGGTCCCTCTGA

Related Sequences

XP_004855522.1 Protein

Arid3b PREDICTED: AT-rich interactive domain-containing protein 3B isoform X2 [Heterocephalus glaber]

Length: 559 aa      View alignments
>XP_004855522.1
MEPMQQQQQKQSHLAPLQMDAREKQGQPMKEAQFLYPQKLVTQPTLLSATPGRPASSPALGPLARVSPATPVARVFERSNVNSEPEEEEGGLEDEDGDDDVAEVAEKEAQAASKYFHVQKAARQDPRAAPMSSLLPAPGLPQHGQQTKEDLTKDASKGPPSVSMAGQPTWNPEEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFIFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPTAATAAAAGPPALLSPPKIRFPVLGLGSSSGTSASGPRLSPAATLRKGDGVPTTTVPVPNRLAVPVALAGPQTGSRVAALEQLRERLESGEPAEKKAARLSEEEQRLVQQAFQRNLFSMARQLPVKIRINGREDRGEASAAALNLTPSSIGSINMSVDIDGTTYAGVLFAQKPVVHLITGPTAQSVVGSSSGGGSSSSSGGSHCSQSPTSSRGTPSAEPSTSWSL