Details from NCBI annotation

Gene Symbol Rab11fip1
Gene Name RAB11 family interacting protein 1 (class I), transcript variant X1
Entrez Gene ID 101712078

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAB11FIP1 ENSCPOG00000008298 (Guinea pig)

Gene Details

RAB11 family interacting protein 1 (class I)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007461, Guinea pig)

Protein Percentage 73.52%
CDS Percentage 80.94%
Ka/Ks Ratio 0.39338 (Ka = 0.1692, Ks = 0.43)

RAB11FIP1 ENSG00000156675 (Human)

Gene Details

RAB11 family interacting protein 1 (class I)

External Links

Gene Match (Ensembl Protein ID: ENSP00000331342, Human)

Protein Percentage 70.49%
CDS Percentage 78.02%
Ka/Ks Ratio 0.42914 (Ka = 0.2078, Ks = 0.4843)

Rab11fip1 ENSMUSG00000031488 (Mouse)

Gene Details

RAB11 family interacting protein 1 (class I)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058042, Mouse)

Protein Percentage 68.05%
CDS Percentage 74.26%
Ka/Ks Ratio 0.30263 (Ka = 0.226, Ks = 0.7469)

Rab11fip1 ENSRNOG00000045531 (Rat)

Gene Details

rab11 family-interacting protein 1 isoform 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067013, Rat)

Protein Percentage 55.97%
CDS Percentage 67.3%
Ka/Ks Ratio 0.4784 (Ka = 0.3531, Ks = 0.7382)

Genome Location

Sequence Coding sequence

Length: 3717 bp    Location: 5710107..5741974   Strand: +
>XM_004855378.1
ATGTCGCTGGCAGCCTCTGCAGGCCGGGGCCTGGGGGCTGTGTGGTCCCCAACTCACGTGCAGGTGACTGTGCTACAGGCGCGGGGCCTCCGGGCCAAGGGTCCCGGGGGCACGAGCGACGCGTACGCGGTGATCCAGGTAGGCAAGGAGAAGTACGCCACCTCGGTGTCCGAGCGTAGCCTGGGTGCGCCGGTGTGGCGGGAGGAGGCCACTTTCGAGCTGCCCCCGCTGCTCTCCTCCGAGGCCGTGCCCGCGGCCGCCGCCACTCTGCAGCTCACCGTGCTGCACCGCGCACTGCTCGGCCTCGACAAGTTCCTGGGCCGCGCTGAGGTGGACCTGCGGGAGCTGCACCGGGACCAGGGCCGCAGAAAGACGCAGTGGTACGCCTTGAAATCCAAACCAGGAAAGAAGGAAAAAGAGCGGGGAGAAATTAAGGTCGACATCCAGTTTATGAGAAACAACATGACAGCCAGCATGTTCGACCTGTCCATGAAGGACAAGTCCCGAAATCCATTTGGAAAACTGAAGGACAAGATCAAGGGGAAGCACAAGGACAGCGCATCAGACACTGCCTCTGCCATCGTCCCTAGCTCAACACCCTCAGTTGACAGTGACGACGAGTCTTTCTCAAAAGACAAGAAAAAGAAATCAAAGGTCAAGACCTTGTTTTCCAAGTCAAATTTACAGAAAACACCGCTTTCCCAGTCCATGTCTGTCCTGCCCATTTCAAAGTCAGATAGAGTGCTGCTCCGACCTGGAGACTTCCGGTCCCAGTGGGAGGATGACGACCAGGAGGATGAGTCCTCCTCCTCTGCCTCAGACATCATGTCCCACAAGAGAACAGTGAGTATGGACCCTAAGCAGCTGAACCAGATCAACTTCAGCCTTCCCAAGAAGGAAGGACTCTCCTTTCTTGGGGGCCTGCGATCCAAGAACGACACCCTTTCCCGCTCTAACGTCTGCATCAACGGGAACCATGTTTACGTGGAGCAACCGGAGGCCAGGACTGAGACCAAGGACAGCAGTCCAGCCTCCTCTCCGTCACCCCAGGGCTTCAGGAAGAAGCACTTGTTCTCCTCCTCCGAAAACCTGGCTGCCCGGGCTTGCAAGGAGCCTGGGGAGGGTGGTGCCCTGTCTTCTGACACCTCCACCAGGGACTCTCTGAAGTCCATGTCCCTGCCATCTTACCGACCACCAGCCAGCGGGGACACTAGGGAAGGCACAGCTCCAGTGAACTTGGAGGCTGTGAAAGAAACCAAGGACAGCAAGAAGCAGGAGGGAAAGAGGTCCTCTTTGCTTTCTCTGGTGACAGGAAAGAAGGATGTGGTTAAGGGCAGTGAAGGCGCGCGCACCACTGCCGTCCCAGGGAAGGAGAAGGAAGGCGTGCTTTCAGAAACTCGGCCGCCAGAGGAAGTCTTCGTGAGAGGGTCTGAGAAAGACGTTGTGGCCTACACCTCCCGACAGGGTCACTCTTTGAATCCCTTTGAAGACGTGCCGATCTCAGAACCGGAAGCTGGACCTGAGTCCAAGTCCAACCCAAAGCCACCTGCTCCCTCTGCAAGGACTCCCCAGACCAAAGCTGTCAAGCCTCGACTGGAAGTGTCTTCAGAGGCTCAACCCAAAGCCAGGCTTCCTTCCTCCCCTGACTCTTCTGTCTTTTTTTCTACTATTCCTTCCAGTTCTGGTCAGGCACCTGGCCCTTCCGAATTGGGGCATGGTTCAGAGTCCCAGTCCTCTGAAAGTCCTTCTGTCTTCTCTTCTTTCCCATCTCCCATAGCAGCTCCCATTTCCACATCCACCCCAGTTGGACACTGGCCCTCCTCAGGCCAGGGCCAGGCCAGTTTGCTCCTCCAAGCAGACTTGCAAAAGGAGAGTTTAACACCAGTCCCAAACACTGGTTCTTCTGCCCTGGGACCACTTTTCAAACAACCCCCCACCCCAGTATGGAAAGGGACAGGAAGTCCTTCGAGGGAGAATGCTGACTGGACAGAGCCAGGAAGCTCTCTCCTGGAGCAGCCTGGGGTGGGGCAGCGAGAAGAAGTACTTCTGGATGCTCCCTCCCCAAAACAAGGCTGCACCCTGTCAGCTGGAGACACCCCTGAGGAGCTGTCTGCAGTCTCACTGGGTGGTGGCAGAATTGTAGACCCCACTGGGAAGCTGCCCATGGAGGGACATGCAGACCTGGAGAGTCATCCTAGGCCTTCTGCGCAGAGCAGAGTTACGGGTGCCAGAATGTCTTCCACAGTCAAAGAAGTAGCAGTGCCTCTTCCAGCAGATGAATTGGCACCCCTACCTGATTCCTTGATGCAGAAACAGGAAGAGATGAACCTGAATGGTGGCCAGGGCCAAAAGAAAGGCAAGAAGCGTGTGTCATTTTCTGAGCAGCCCTTTACAGAAGAGGTGGAGAAACCCACTGGACTGGGGGAAGATGACAAAAATCACCCCCAGGAGCTGACTCTTGAAGGTGCCACTATGGAAGGCGCGTCTGGTACAGACCCTGCTGGCTGTCTCCACTCAGAAGATGCAGAGAGGGAGCGTATTACTGTGCCAGCTGCCATAGAAGGTGGTTCCGTGGTCCCCTCTCATGCGGAGAGTTCCTCAGGAGGCCTCAGGAGTAAAGTGAGCTTGGCGAAGCACACCCCACTCTTCAGGATCGAGGGCATTGATACATTCACGTCTCAGTACCAAAGCAAGGCTAGTGATCACGAAGGCTCACAGTCCGATCCCTTGAGTGTCTTTCCCTCTGCCTCAGAGATGACACCTCCCATGGTGGCCGATCTGAACTTGACCCTTCCCTCCATCCCTGAAGTGGCATCAGACGATGAAAGAGTAGATCAGGTGGAGGATGGGGGGAAGACAGCAGGCGCTTCATCCTGGAGCACGTGGCCTCCCCATCCCAAGCAGGCAGAGGGGCTGAGTGGAAGGACAGATGGGGCAGTGCTTGCTGAGAGTCTGCATGGCTTTAGCTCTCTGGTCTCTGCAGCATCTCCTTCTGAGCAGAAGGCAGCTTTAGGAATTGATAAACCACATCTTGTCAAGGGCACAAACAAGGATGAACAGCTCCCAGGCCCTGGCGGTGATGAGGAAGAGAAACCAAAGGCAGGCAGGAGTCCAGGTCACCCTCCTGGCCTGTCCCCTCACTCTCCTGTGCCCAGCCCCTCCCTTTCTGAGACCTTTCCTGCCACACACTCTTTCCCTAGTTCTCCACACGCTGACGCTCACCACACCAGTACAGCAGAATCTCTCAAAAAAGCAACAGCAGAGGGCTCTACTGGTAAAGTTGAAAATTTTGGCAAGAGGAAGCCGCTTCTTCAGGCCTGGGTCTCACCCTCAGAGACACATCCAGTCTCAGCTCAGCCAGGCGCTGGAACTGGGGCAGCCAAGCACAGACTTCAACCTGTGAAGCCAATGAACACAACAGCCACCAAAATTTCTAACTCCAGCTTGGGAATGGCCACCATCATCAGTGAGAATGTGACCAGTGACGCCATGATAAAGAAGTACAGCCCCTCGGACCCTGCCTTCGCCTATGCCCAGCTGACTCACGAGGAGCTGATCCAGCTGGTCCTCAAACAGAAGGAAACCATCAGCAAGAAGGAGTTTCAGGTGCGTGAGCTAGAGGACTACATTGACAACCTGCTCGTCAGGGTCATGGAAGAGACCCCCAACATCCTCCGCATCCCGGCTCCAGTTGGCAAAAAAGCAGGGAAGATGTGA

Related Sequences

XP_004855435.1 Protein

Rab11fip1 PREDICTED: rab11 family-interacting protein 1 isoform X1 [Heterocephalus glaber]

Length: 1238 aa      View alignments
>XP_004855435.1
MSLAASAGRGLGAVWSPTHVQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERSLGAPVWREEATFELPPLLSSEAVPAAAATLQLTVLHRALLGLDKFLGRAEVDLRELHRDQGRRKTQWYALKSKPGKKEKERGEIKVDIQFMRNNMTASMFDLSMKDKSRNPFGKLKDKIKGKHKDSASDTASAIVPSSTPSVDSDDESFSKDKKKKSKVKTLFSKSNLQKTPLSQSMSVLPISKSDRVLLRPGDFRSQWEDDDQEDESSSSASDIMSHKRTVSMDPKQLNQINFSLPKKEGLSFLGGLRSKNDTLSRSNVCINGNHVYVEQPEARTETKDSSPASSPSPQGFRKKHLFSSSENLAARACKEPGEGGALSSDTSTRDSLKSMSLPSYRPPASGDTREGTAPVNLEAVKETKDSKKQEGKRSSLLSLVTGKKDVVKGSEGARTTAVPGKEKEGVLSETRPPEEVFVRGSEKDVVAYTSRQGHSLNPFEDVPISEPEAGPESKSNPKPPAPSARTPQTKAVKPRLEVSSEAQPKARLPSSPDSSVFFSTIPSSSGQAPGPSELGHGSESQSSESPSVFSSFPSPIAAPISTSTPVGHWPSSGQGQASLLLQADLQKESLTPVPNTGSSALGPLFKQPPTPVWKGTGSPSRENADWTEPGSSLLEQPGVGQREEVLLDAPSPKQGCTLSAGDTPEELSAVSLGGGRIVDPTGKLPMEGHADLESHPRPSAQSRVTGARMSSTVKEVAVPLPADELAPLPDSLMQKQEEMNLNGGQGQKKGKKRVSFSEQPFTEEVEKPTGLGEDDKNHPQELTLEGATMEGASGTDPAGCLHSEDAERERITVPAAIEGGSVVPSHAESSSGGLRSKVSLAKHTPLFRIEGIDTFTSQYQSKASDHEGSQSDPLSVFPSASEMTPPMVADLNLTLPSIPEVASDDERVDQVEDGGKTAGASSWSTWPPHPKQAEGLSGRTDGAVLAESLHGFSSLVSAASPSEQKAALGIDKPHLVKGTNKDEQLPGPGGDEEEKPKAGRSPGHPPGLSPHSPVPSPSLSETFPATHSFPSSPHADAHHTSTAESLKKATAEGSTGKVENFGKRKPLLQAWVSPSETHPVSAQPGAGTGAAKHRLQPVKPMNTTATKISNSSLGMATIISENVTSDAMIKKYSPSDPAFAYAQLTHEELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPAPVGKKAGKM