Sequence details NCBI ID: XM_004855348.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fgfr1
Gene Name fibroblast growth factor receptor 1, transcript variant X11
Entrez Gene ID 101700324

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FGFR1 ENSCPOG00000006553 (Guinea pig)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005900, Guinea pig)

Protein Percentage 99.15%
CDS Percentage 93.51%
Ka/Ks Ratio 0.01314 (Ka = 0.0043, Ks = 0.3296)

FGFR1 ENSG00000077782 (Human)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000393312, Human)

Protein Percentage 98.9%
CDS Percentage 92.4%
Ka/Ks Ratio 0.01492 (Ka = 0.0059, Ks = 0.3988)

Fgfr1 ENSMUSG00000031565 (Mouse)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081041, Mouse)

Protein Percentage 98.54%
CDS Percentage 89.7%
Ka/Ks Ratio 0.01094 (Ka = 0.0066, Ks = 0.6005)

Fgfr1 ENSRNOG00000016050 (Rat)

Gene Details

Fibroblast growth factor receptor 1 (Fgfr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036885, Rat)

Protein Percentage 98.66%
CDS Percentage 90.15%
Ka/Ks Ratio 0.01176 (Ka = 0.0065, Ks = 0.555)

Genome Location

Sequence Coding sequence

Length: 2469 bp    Location: 5162106..5213870   Strand: +
Raw sequence   
>XM_004855348.1
ATGTGGAGCTGGAAGTGCCTCCTCTTCTGGGCTGTGCTGGTCACAGCCACACTGTGCACTGCCAGGCCAGCCCCAACCTTGCCTGAACAAGCCCAGCCCTGGGGAGCCCCTGTGGAGGTGGAGTCCCTCCTGGTCCACCCTGGTGACCTGCTGCAGCTTCGCTGTCGGCTGCGGGATGATGTACAGAGCATCAACTGGCTGCGGGACGGGGTGCAGCTCATGGAAAGCAACCGTACCCGCATCACAGGGGAGGAGGTGGAGGTGCGGGATTCCGTGCCCGCCGACTCCGGCCTCTACGCTTGTGTGACCAGCAGTCCCTCCGGCAGCGACACCAGCTACTTCTCCGTCAATGTCTCAGATGCGCTCCCCTCCTCAGAGGATGACGATGATGACGATGACTCCTCATCCGAGGAGAAAGAGACAGACAACACCAAACCAAACCGTATGCCCGTAGCTCCATATTGGACATCCCCAGAGAAGATGGAGAAGAAACTGCATGCGGTGCCTGCTGCCAAGACAGTGAAGTTTAAATGTCCTTCTAGTGGGACACCCAGCCCAACACTGCGCTGGTTGAAAAATGGCAAAGAATTCAAACCTGACCATAGGATCGGAGGCTACAAGGTCCGTTATGCCACCTGGAGCATTATCATGGACTCTGTGGTGCCCTCTGACAAGGGTAACTACACCTGCATAGTGGAGAATGAGTACGGAAGCATTAACCACACCTACCAGCTCGATGTCGTGGAGCGGTCCCCTCACAGGCCCATCCTGCAGGCAGGATTGCCTGCCAACAAGACAGTGGCCCTGGGCAGCAACGTGGAATTCATGTGTAAGGTGTACAGTGACCCACAGCCCCACATTCAATGGCTGAAACACATCGAGGTGAACGGGAGTAAGATTGGCCCGGACAACCTGCCTTACGTGCAGATCTTGAAGACTGCCGGAGTTAATACCACCGACAAGGAGATGGAAGTGCTTCACTTAAGGAATGTCTCCTTTGAGGACGCGGGGGAGTATACGTGCTTGGCGGGTAACTCTATCGGACTCTCCCATCACTCTGCATGGTTGACCGTTCTGGAAGCCCTGGAAGAGAGACCTGCAGTGATGACCTCACCCCTCTACCTGGAGATCATCATCTACTGCACAGGTGCCTTCCTCATCTCCTGCATGGTGGGCGCTGTCATCACCTACAAGATGAAGAGTGGCACCAAGAAGAGTGACTTCCACAGCCAGATGGCCGTGCACAAGCTGGCCAAGAGCATCCCCCTGCGCAGACAGGTAACAGTATCAGCTGACTCCAGCGCCTCCATGAACTCTGGGGTTCTTCTGGTCCGGCCTTCCCGTCTCTCCTCCAGTGGGACCCCCATGCTAGCTGGGGTCTCTGAATATGAACTTCCCGAAGACCCCCGGTGGGAGCTACCCCGGGACAGACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAGAGGCCATTGGGCTGGACAAGGACAAACCCAACCGTGTGACCAAAGTGGCTGTGAAGATGTTGAAGTCTGATGCAACAGAGAAGGACCTGTCGGACCTAATCTCTGAAATGGAGATGATGAAGATGATTGGAAAGCACAAAAACATCATCAACCTGCTGGGGGCCTGTACACAAGACGGTCCTTTGTATGTCATCGTGGAGTATGCCTCCAAGGGCAACCTGCGGGAGTACCTGCAGGCCCGGCGGCCCCCAGGGCTGGAATACTGTTACAACCCCAGCCACAACCCCGAGGAGCAGCTCTCCTCCAAGGACCTGGTGTCCTGCGCCTACCAGGTGGCCCGGGGCATGGAATATCTTGCCTCCAAGAAGTGCATCCACCGAGACCTGGCCGCCAGGAATGTCCTGGTGACAGAGGACAATGTGATGAAGATTGCGGACTTTGGCCTGGCTCGAGACATTCATCACATAGACTACTATAAGAAGACAACGAATGGCCGGCTGCCTGTGAAGTGGATGGCACCCGAGGCACTGTTTGACCGGATCTATACCCACCAGAGTGATGTGTGGTCTTTTGGGGTCCTCCTGTGGGAAATCTTCACACTGGGTGGCTCCCCATATCCTGGGGTGCCTGTGGAGGAGCTTTTCAAGCTGCTGAAAGAGGGTCATCGTATGGACAAGCCCAGTAACTGCACCAATGAGCTGTATATGATGATGCGGGACTGCTGGCATGCAGTGCCCTCTCAGAGACCTACCTTCAAGCAACTGGTGGAAGACCTGGACCGCATTGTGGCCTTGACCTCCAACCAGGAGTATCTGGACTTGTCGATGCCCCTGGACCAGTACTCTCCCAGCTTTCCTGACACCCGAAGCTCTACCTGCTCCTCAGGGGAAGATTCTGTCTTCTCTCATGAGCCATTGCCTGAGGAACCCTGTCTGCCCCGACACCCAACCCAGCTTGCCAATGGTGGACTCAAAAGACGCTGA

Related Sequences

XP_004855405.1 Protein

Fgfr1 PREDICTED: fibroblast growth factor receptor 1 isoform X11 [Heterocephalus glaber]

Length: 822 aa      View alignments
>XP_004855405.1
MWSWKCLLFWAVLVTATLCTARPAPTLPEQAQPWGAPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLMESNRTRITGEEVEVRDSVPADSGLYACVTSSPSGSDTSYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPSPTLRWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQLDVVERSPHRPILQAGLPANKTVALGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEYTCLAGNSIGLSHHSAWLTVLEALEERPAVMTSPLYLEIIIYCTGAFLISCMVGAVITYKMKSGTKKSDFHSQMAVHKLAKSIPLRRQVTVSADSSASMNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMPLDQYSPSFPDTRSSTCSSGEDSVFSHEPLPEEPCLPRHPTQLANGGLKRR