Sequence detailsNCBI ID: XM_004855348.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Fgfr1
Gene Name fibroblast growth factor receptor 1, transcript variant X11
Entrez Gene ID 101700324

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624780.1 (SequenceType object (1))

For more information consult the page for NW_004624780.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FGFR1ENSCPOG00000006553 (Guinea pig)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000005900, Guinea pig)

Protein Percentage 99.15%
CDS Percentage 93.51%
Ka/Ks Ratio 0.01314 (Ka = 0.0043, Ks = 0.3296)

FGFR1ENSG00000077782 (Human)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match(Ensembl Protein ID:ENSP00000393312, Human)

Protein Percentage 98.9%
CDS Percentage 92.4%
Ka/Ks Ratio 0.01492 (Ka = 0.0059, Ks = 0.3988)

Fgfr1ENSMUSG00000031565 (Mouse)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000081041, Mouse)

Protein Percentage 98.54%
CDS Percentage 89.7%
Ka/Ks Ratio 0.01094 (Ka = 0.0066, Ks = 0.6005)

Fgfr1ENSRNOG00000016050 (Rat)

Gene Details

Fibroblast growth factor receptor 1 (Fgfr1), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000036885, Rat)

Protein Percentage 98.66%
CDS Percentage 90.15%
Ka/Ks Ratio 0.01176 (Ka = 0.0065, Ks = 0.555)

Genome Location

Sequence SequenceType object (2)

Length: 2469 bp    Location: 5162106..5213870   Strand: +
Raw sequence   
>XM_004855348.1
ATGTGGAGCTGGAAGTGCCTCCTCTTCTGGGCTGTGCTGGTCACAGCCACACTGTGCACTGCCAGGCCAGCCCCAACCTTGCCTGAACAAGCCCAGCCCTGGGGAGCCCCTGTGGAGGTGGAGTCCCTCCTGGTCCACCCTGGTGACCTGCTGCAGCTTCGCTGTCGGCTGCGGGATGATGTACAGAGCATCAACTGGCTGCGGGACGGGGTGCAGCTCATGGAAAGCAACCGTACCCGCATCACAGGGGAGGAGGTGGAGGTGCGGGATTCCGTGCCCGCCGACTCCGGCCTCTACGCTTGTGTGACCAGCAGTCCCTCCGGCAGCGACACCAGCTACTTCTCCGTCAATGTCTCAGATGCGCTCCCCTCCTCAGAGGATGACGATGATGACGATGACTCCTCATCCGAGGAGAAAGAGACAGACAACACCAAACCAAACCGTATGCCCGTAGCTCCATATTGGACATCCCCAGAGAAGATGGAGAAGAAACTGCATGCGGTGCCTGCTGCCAAGACAGTGAAGTTTAAATGTCCTTCTAGTGGGACACCCAGCCCAACACTGCGCTGGTTGAAAAATGGCAAAGAATTCAAACCTGACCATAGGATCGGAGGCTACAAGGTCCGTTATGCCACCTGGAGCATTATCATGGACTCTGTGGTGCCCTCTGACAAGGGTAACTACACCTGCATAGTGGAGAATGAGTACGGAAGCATTAACCACACCTACCAGCTCGATGTCGTGGAGCGGTCCCCTCACAGGCCCATCCTGCAGGCAGGATTGCCTGCCAACAAGACAGTGGCCCTGGGCAGCAACGTGGAATTCATGTGTAAGGTGTACAGTGACCCACAGCCCCACATTCAATGGCTGAAACACATCGAGGTGAACGGGAGTAAGATTGGCCCGGACAACCTGCCTTACGTGCAGATCTTGAAGACTGCCGGAGTTAATACCACCGACAAGGAGATGGAAGTGCTTCACTTAAGGAATGTCTCCTTTGAGGACGCGGGGGAGTATACGTGCTTGGCGGGTAACTCTATCGGACTCTCCCATCACTCTGCATGGTTGACCGTTCTGGAAGCCCTGGAAGAGAGACCTGCAGTGATGACCTCACCCCTCTACCTGGAGATCATCATCTACTGCACAGGTGCCTTCCTCATCTCCTGCATGGTGGGCGCTGTCATCACCTACAAGATGAAGAGTGGCACCAAGAAGAGTGACTTCCACAGCCAGATGGCCGTGCACAAGCTGGCCAAGAGCATCCCCCTGCGCAGACAGGTAACAGTATCAGCTGACTCCAGCGCCTCCATGAACTCTGGGGTTCTTCTGGTCCGGCCTTCCCGTCTCTCCTCCAGTGGGACCCCCATGCTAGCTGGGGTCTCTGAATATGAACTTCCCGAAGACCCCCGGTGGGAGCTACCCCGGGACAGACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAGAGGCCATTGGGCTGGACAAGGACAAACCCAACCGTGTGACCAAAGTGGCTGTGAAGATGTTGAAGTCTGATGCAACAGAGAAGGACCTGTCGGACCTAATCTCTGAAATGGAGATGATGAAGATGATTGGAAAGCACAAAAACATCATCAACCTGCTGGGGGCCTGTACACAAGACGGTCCTTTGTATGTCATCGTGGAGTATGCCTCCAAGGGCAACCTGCGGGAGTACCTGCAGGCCCGGCGGCCCCCAGGGCTGGAATACTGTTACAACCCCAGCCACAACCCCGAGGAGCAGCTCTCCTCCAAGGACCTGGTGTCCTGCGCCTACCAGGTGGCCCGGGGCATGGAATATCTTGCCTCCAAGAAGTGCATCCACCGAGACCTGGCCGCCAGGAATGTCCTGGTGACAGAGGACAATGTGATGAAGATTGCGGACTTTGGCCTGGCTCGAGACATTCATCACATAGACTACTATAAGAAGACAACGAATGGCCGGCTGCCTGTGAAGTGGATGGCACCCGAGGCACTGTTTGACCGGATCTATACCCACCAGAGTGATGTGTGGTCTTTTGGGGTCCTCCTGTGGGAAATCTTCACACTGGGTGGCTCCCCATATCCTGGGGTGCCTGTGGAGGAGCTTTTCAAGCTGCTGAAAGAGGGTCATCGTATGGACAAGCCCAGTAACTGCACCAATGAGCTGTATATGATGATGCGGGACTGCTGGCATGCAGTGCCCTCTCAGAGACCTACCTTCAAGCAACTGGTGGAAGACCTGGACCGCATTGTGGCCTTGACCTCCAACCAGGAGTATCTGGACTTGTCGATGCCCCTGGACCAGTACTCTCCCAGCTTTCCTGACACCCGAAGCTCTACCTGCTCCTCAGGGGAAGATTCTGTCTTCTCTCATGAGCCATTGCCTGAGGAACCCTGTCTGCCCCGACACCCAACCCAGCTTGCCAATGGTGGACTCAAAAGACGCTGA

Related Sequences

XP_004855405.1 SequenceType object (4)

Fgfr1 PREDICTED: fibroblast growth factor receptor 1 isoform X11 [Heterocephalus glaber]

Length: 822 aa      View alignments
>XP_004855405.1
MWSWKCLLFWAVLVTATLCTARPAPTLPEQAQPWGAPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLMESNRTRITGEEVEVRDSVPADSGLYACVTSSPSGSDTSYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPSPTLRWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQLDVVERSPHRPILQAGLPANKTVALGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEYTCLAGNSIGLSHHSAWLTVLEALEERPAVMTSPLYLEIIIYCTGAFLISCMVGAVITYKMKSGTKKSDFHSQMAVHKLAKSIPLRRQVTVSADSSASMNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMPLDQYSPSFPDTRSSTCSSGEDSVFSHEPLPEEPCLPRHPTQLANGGLKRR