Sequence details NCBI ID: XM_004855283.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ikbkb
Gene Name inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta, transcript variant X4
Entrez Gene ID 101711077

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IKBKB ENSCPOG00000010558 (Guinea pig)

Gene Details

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009478, Guinea pig)

Protein Percentage 96.43%
CDS Percentage 92.77%
Ka/Ks Ratio 0.05678 (Ka = 0.0177, Ks = 0.311)

IKBKB ENSG00000104365 (Human)

Gene Details

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000430684, Human)

Protein Percentage 94.97%
CDS Percentage 89.68%
Ka/Ks Ratio 0.05245 (Ka = 0.0257, Ks = 0.4902)

Ikbkb ENSMUSG00000031537 (Mouse)

Gene Details

inhibitor of kappaB kinase beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033939, Mouse)

Protein Percentage 92.59%
CDS Percentage 87.26%
Ka/Ks Ratio 0.05489 (Ka = 0.0357, Ks = 0.6507)

Ikbkb ENSRNOG00000019073 (Rat)

Gene Details

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta (Ikbkb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025851, Rat)

Protein Percentage 91.4%
CDS Percentage 87.13%
Ka/Ks Ratio 0.06481 (Ka = 0.0414, Ks = 0.639)

Genome Location

Sequence Coding sequence

Length: 2271 bp    Location: 972016..922524   Strand: -
Raw sequence   
>XM_004855283.1
ATGAGCTGGTCACCTTCCCTGCCGACGCAGACATGTGGGGCCTGGGAAATGAAAGAACGGCTGGGGACAGGGGGATTCGGAAATGTCATCCGCTGGCACAATCAGGAGACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCACGGAACCGGGAGCGCTGGTGCCTGGAGATCCAGATTATGAGAAGGCTGAACCACCCCAATGTGGTTGCCGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCACCCAATGACCTGCCCCTGCTAGCCATGGAGTATTGCCAAGGAGGAGACCTCCGTAAGTACTTGAACCAGTTTGAGAACTGCTGTGGCCTGCGGGAAGGAGCCATCCTCACCTTGCTGAGTGACATTGCATCAGCACTTAGATACCTTCATGAAAACAGAATCATCCATCGAGATCTAAAGCCAGAAAACATCGTTCTGCAGCAAGGAGAGCAAAGATTAATACACAAAATTATTGACCTAGGATATGCCAAGGAACTGGATCAGGGCAGTCTTTGTACTTCCTTTGTGGGGACCCTGCAGTACCTGGCCCCTGAGCTGCTGGAGCAGCAGAAGTACACAGTGACTGTGGACTACTGGAGCTTTGGCACCCTAGCCTTCGAGTGCATTACTGGCTTCCGGCCTTTTCTCCCCAACTGGCAGCCAGTGCAATGGCATTCAAAAGTCCGGCAGAAGAGTGAGGTAGACATTGTTGTTAGTGAAGACTTGAATGGAACAGTGAAGTTCTCAAGCTCTTTACCTTACCCCAACAATCTGAACAGTGTGCTGGCCAAGCGACTGGAGAAGTGGCTGCAGCTGATGCTCATGTGGCACCCCCGGCAGAGGGGCACAGACCCCCAGTATGGACCCAACGGCTGCTTCCGGGCCCTGGATGACATTTTAAACCTGAAGCTGGTTCATGTCTTGAACATGGTCACAGGCACCATTCACACCTATCCTGTAACGGAAGATGAGGGTCTGCAGAGGTTAAAGACCAGAATCCAGGAGGACACAGGAATACCAGAGAAGGACCAGGAGCTGCTGCAGGAGGCAGGTCTGGCCTTGATCCCGGACAAGCCTGCCACTCAGTGCATTTCTGATGGCAAGCCAAATGAGGGCCGCACATTGGACATGGATCTTGTTTTCCTCTTCGACAACAGTAAAATCACCTATGAGACTCAGATCTCCCCACGACCGCAGCCCGAGAGTGTCAGTTGCATCCTTCAGGAGCCCAAGAGGAATCTCCCCTTCTTCCAGTTGAGGAAAGTGTGGGGCCAGGTGTGGCACAGCGTCCAGGCCCTGAAGGAGGACTGCAACCGGCTGCAGCAGGGACAGCGAGCTGCCATGATGAATCTCCTACGGAATAATAGCTGCCTCTCCAAGATGAAGAATTCCATGGCCTCCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTTAAAACCAGCATCCAAATTGACCTGGAAAAGTACAGTGAGCAGACTGAGTTTGGGATCACATCAGATAAACTGCTGCTGGCCTGGAAGGAAATGGAACAGGCCGTGGAGCTGTGTGGGCGGGAGAATGAAGTGAAATACCTGGTGGAGCGGATGATGGCCCTGCAGACCGACATTGTGGACTTGCAGAGGAGCCCAATGGGTCGCAAGCAGGGTGGCACACTGGACGACCTAGAGGAGCAAGCGAGGGAGCTCTACAGGAGACTGAGGGAAAAGCCAAGAGACCAGCGAACAGATGGTGACAGTCAGGAAATGGTGCGGTTGCTACTTCAGGCCATTCAAGGTTTCGAGAAGAAAGTGCGAGTGATTTACACACAGCTGAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAATTGCTGCCGAAGGTGGAAGAGGTGGTGAGTCTGATGAACGAGGATGAGAAGACCGTCGTCCGGCTCCAGGAGAAGCGGCAGAAGGAGCTCTGGAACCTCCTGAAGATCGCGTGTAGCAAGGTCCGTGGTCCTGTCAGCGGAAGCCCAGACAGCATGAACACATCTCGACTTAGTCACTCTGGTCAGCTGATGTCCCAGCCTTCCACTGCCTCTGACAGCTTACCTGAGCCAGCCAAGAAAAGTGAAGAGCTCGTGGCTGAAGCACACTCCCTCTGCTTCCAGCTGGAAAGTGCCATGCAGGACACGGTGAAGGAGCAGGACAGAAGCCTCATGGCTCTGGACTGGAGTTGGTTACACACAGAAGACGAGGAACAGAGTGGCCTGGAGCCAGCCTCGTGA

Related Sequences

XP_004855340.1 Protein

Ikbkb PREDICTED: inhibitor of nuclear factor kappa-B kinase subunit beta isoform X4 [Heterocephalus glaber]

Length: 756 aa      View alignments
>XP_004855340.1
MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQNLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEVDIVVSEDLNGTVKFSSSLPYPNNLNSVLAKRLEKWLQLMLMWHPRQRGTDPQYGPNGCFRALDDILNLKLVHVLNMVTGTIHTYPVTEDEGLQRLKTRIQEDTGIPEKDQELLQEAGLALIPDKPATQCISDGKPNEGRTLDMDLVFLFDNSKITYETQISPRPQPESVSCILQEPKRNLPFFQLRKVWGQVWHSVQALKEDCNRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYSEQTEFGITSDKLLLAWKEMEQAVELCGRENEVKYLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNTSRLSHSGQLMSQPSTASDSLPEPAKKSEELVAEAHSLCFQLESAMQDTVKEQDRSLMALDWSWLHTEDEEQSGLEPAS