Sequence details NCBI ID: XM_004855279.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Polb
Gene Name polymerase (DNA directed), beta
Entrez Gene ID 101710722

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POLB ENSCPOG00000010567 (Guinea pig)

Gene Details

polymerase (DNA directed), beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009487, Guinea pig)

Protein Percentage 95.52%
CDS Percentage 93.53%
Ka/Ks Ratio 0.13248 (Ka = 0.029, Ks = 0.2187)

POLB ENSG00000070501 (Human)

Gene Details

polymerase (DNA directed), beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000265421, Human)

Protein Percentage 97.01%
CDS Percentage 93.93%
Ka/Ks Ratio 0.06568 (Ka = 0.0152, Ks = 0.232)

Polb ENSMUSG00000031536 (Mouse)

Gene Details

polymerase (DNA directed), beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033938, Mouse)

Protein Percentage 95.52%
CDS Percentage 89.35%
Ka/Ks Ratio 0.03804 (Ka = 0.0205, Ks = 0.538)

Polb ENSRNOG00000019150 (Rat)

Gene Details

polymerase (DNA directed), beta (Polb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026039, Rat)

Protein Percentage 95.52%
CDS Percentage 88.96%
Ka/Ks Ratio 0.03749 (Ka = 0.0208, Ks = 0.5539)

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location: 914673..884734   Strand: -
Raw sequence   
>XM_004855279.1
ATGAGTAAACGGAAGGCGCCGCAGGAGACGCTCAACGGGGGAATCACCGACATGCTCATGGAACTCGCAAACTTTGAGAAGAACGTGAGCCAGGCTATCCACAAGTACAATGCTTACAGAAAAGCAGCATCAGTTATAGCAAAGTACCCACACAAAATCAAGAGTGGAGCAGAAGCCAAGAAATTGCCTGGAGTAGGAACAAAAATTGCTGAAAAAATTGATGAGTTTTTAGCAACTGGAAAATTGCGTAAACTGGAAAAGATTCGGCAAGATGATATGAGTTCTTCCATCAATTTCTTAACTCGAGTTAGTGGCATTGGTCCATCTGCTGCAAGGAAGTTTGTAGATGAAGGAATTAAAACATTAGAAGATCTCAGGAAAAATGAAGATAAGTTGAACCATCATCAACGAATTGGGCTAAAATACTTTGAGGACTTTGAAAAAAGAATCCCTCGTGAAGAGATGTTACAAATGCAAGATATTGTACTAAGTGAAGTTAAAAAACTGGATTCTGAATACATTGCTACAGTCTGTGGCAGTTTCAGAAGAGGTGCAGAATCCAGTGGTGACATGGATGTTCTTCTGACCCATCCAGACTTCACTTCAGAATCAAGCAAACAGCCAAAGCTATTACATCATGTCGTGGAGCAATTACAAAAGATCCATTTTATTACAGATACTCTGTCAAAGGGTGAGACCAAGTTTATGGGTGTTTGCCAACTTCCCAGTAAAAATGATGAAAAGGAATATCCACACAGAAGAATTGATATCAGGTTGATTCCCAAAGATCAGTATTACTGTGGTGTTCTCTACTTCACTGGGAGTGATATTTTCAATAAGAATATGAGAGCTCATGCCCTAGAACAGGGCTTCACAATCAATGAATACACTATCCGTCCCCTGGGAGTCACTGGAGTAGCTGGAGAACCCCTGCCAGTGGACAGTGAGAAAGACATCTTTGATTACATCCAGTGGAAATACCGAGAACCCAAGGATCGAAGCGAATGA

Related Sequences

XP_004855336.1 Protein

Polb PREDICTED: DNA polymerase beta [Heterocephalus glaber]

Length: 335 aa      View alignments
>XP_004855336.1
MSKRKAPQETLNGGITDMLMELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDMSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKLDSEYIATVCGSFRRGAESSGDMDVLLTHPDFTSESSKQPKLLHHVVEQLQKIHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEQGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE