Sequence details NCBI ID: XM_004855278.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vdac3
Gene Name voltage-dependent anion channel 3, transcript variant X3
Entrez Gene ID 101709540

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VDAC3 ENSCPOG00000010512 (Guinea pig)

Gene Details

voltage-dependent anion channel 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009440, Guinea pig)

Protein Percentage 98.23%
CDS Percentage 95.17%
Ka/Ks Ratio 0.05406 (Ka = 0.0087, Ks = 0.1612)

VDAC3 ENSG00000078668 (Human)

Gene Details

voltage-dependent anion channel 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000428845, Human)

Protein Percentage 97.53%
CDS Percentage 93.99%
Ka/Ks Ratio 0.04226 (Ka = 0.011, Ks = 0.2601)

Vdac3 ENSRNOG00000019277 (Rat)

Gene Details

voltage-dependent anion channel 3 (Vdac3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046203, Rat)

Protein Percentage 95.41%
CDS Percentage 91.17%
Ka/Ks Ratio 0.07204 (Ka = 0.0238, Ks = 0.3303)

Genome Location

Sequence Coding sequence

Length: 852 bp    Location: 869959..857707   Strand: -
Raw sequence   
>XM_004855278.1
ATGTGTAACACACCAACTTACTGTGACCTAGGAAAGGCTGCCAAGGATGTCTTCAACAAAGGATATGGGTTTGGCATGGTCAAAATAGACCTGAAAACCAAGTCTTGTAGTGGAGTGGAATTTTCTACTTCAGGTCATGCTTACACTGATACGGGGAAAGCATCAGGCAACCTAGAGACCAAATACAAAGTCTGTAACTATGGACTTACCTTCTCCCAGAAATGGAACACAGACAATACTCTTGGGACAGAAATCTCTTTGGAGAATAAGTTGGCGGAAGGTTTGAAACTGACTCTTGATACTATATTTGTACCGAACACAGGAAAGAAGAGTGGGAAATTGAAGGCCTCCTATAAACGGGATTGTTTCAGTCTTGGCAGTAATGTTGACATAGATTTTTCTGGACCAACCATCTATGGTTGGGCTGTGTTGGCCTTTGAAGGTTGGCTTGCTGGCTATCAGATGAGTTTTGACACAGCCAAATCCAAACTATCTCAGAATAATTTCGCTCTGGGTTACAAGGCTTCAGACTTTCAGCTGCACACTCATGTGAACGATGGCACTGAATTTGGAGGTTCTATCTACCAGAAAGTTAATGAAAAGATCGAAACATCAATAAACCTTGCATGGACGGCTGGCAGCAACAACACCCGTTTTGGCATTGCTGCTAAATACAAGCTGGATTGTAGAACCTCTCTGTCTGCTAAAGTAAATAATGCCAGCCTGATTGGACTGGGTTATACTCAGACCCTTCGACCAGGAGTCAAACTGACCCTGTCAGCTTTAATTGATGGGAAGAACTTCAACGCCGGAGGTCACAAGGTTGGGTTGGGATTTGAACTGGAAGCTTAG

Related Sequences

XP_004855335.1 Protein

Vdac3 PREDICTED: voltage-dependent anion-selective channel protein 3 isoform X3 [Heterocephalus glaber]

Length: 283 aa      
>XP_004855335.1
MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVEFSTSGHAYTDTGKASGNLETKYKVCNYGLTFSQKWNTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKASDFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA