Details from NCBI annotation

Gene Symbol Rnf170
Gene Name ring finger protein 170, transcript variant X2
Entrez Gene ID 101705067

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF170 ENSCPOG00000001900 (Guinea pig)

Gene Details

ring finger protein 170

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001718, Guinea pig)

Protein Percentage 98.45%
CDS Percentage 94.7%
Ka/Ks Ratio 0.03156 (Ka = 0.0071, Ks = 0.2247)

RNF170 ENSG00000120925 (Human)

Gene Details

ring finger protein 170

External Links

Gene Match (Ensembl Protein ID: ENSP00000445725, Human)

Protein Percentage 96.12%
CDS Percentage 93.15%
Ka/Ks Ratio 0.08333 (Ka = 0.0204, Ks = 0.2447)

Rnf170 ENSMUSG00000013878 (Mouse)

Gene Details

ring finger protein 170

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014022, Mouse)

Protein Percentage 90.27%
CDS Percentage 87.81%
Ka/Ks Ratio 0.11665 (Ka = 0.0527, Ks = 0.4515)

Rnf170 ENSRNOG00000045943 (Rat)

Gene Details

Protein Rnf170; Similar to ring finger protein 170, isoform CRA_c

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064113, Rat)

Protein Percentage 91.83%
CDS Percentage 87.68%
Ka/Ks Ratio 0.08924 (Ka = 0.0447, Ks = 0.5014)

Genome Location

Sequence Coding sequence

Length: 777 bp    Location: 106598..69704   Strand: -
>XM_004855262.1
ATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGTGACCAAGTTCTTGTGGCAGTTGTGGTCAGTTTCACTTTGATTGCTTCCCTGGTATATGCACTTTTCAGAAATGTGCATCAGAACATTCATCCAGAAAACCAAGAGCTAGTAAGGGTGCTTCGAGAACAACTTCAAACAGAACAGGATGTACCTGCTGCTGCTCGACAGCAGTTCTATACTGATATGTACTGTCCTATCTGCTTACATCAAGCCTCCTTCCCTGTTGAAACGAACTGTGGACATCTTTTTTGTGGTGCCTGCATTATTGCTTACTGGAGATATGGTTCATGGCTTGGTGCAATCAGTTGTCCAATATGTAGACAAACGGTAACTTTACTCCTAACGATATTTGGTGACACTGATCAATCTCAGGATGTTGTAAGATTATATCAAGATGTTAATGATTATAATCGGAGATTCTCAGGGCAGCCCAGATCTATTATGGAAAGAATCATGGATCTACCCACTTTACTGAGACATGCTTTCAGGGAAATGTTTTCAGTTGGGGGTCTTTTCTGGATGTTTCGCATTAGGATAATACTTTGTTTAATGGGAGCTTTTTTTTATCTTATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTAGGCTTTCTAGATGATTTCTTTGTCATCTTTTTGTTGCTTATCTACATCTCTATTATGTATCGAGAAGTTATAACCCAGAGGCTAACCAGATGA

Related Sequences

XP_004855319.1 Protein

Rnf170 PREDICTED: E3 ubiquitin-protein ligase RNF170 isoform X2 [Heterocephalus glaber]

Length: 258 aa      View alignments
>XP_004855319.1
MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFTLIASLVYALFRNVHQNIHPENQELVRVLREQLQTEQDVPAAARQQFYTDMYCPICLHQASFPVETNCGHLFCGACIIAYWRYGSWLGAISCPICRQTVTLLLTIFGDTDQSQDVVRLYQDVNDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLTR