Sequence details NCBI ID: XM_004855226.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc39a6
Gene Name solute carrier family 39 (zinc transporter), member 6
Entrez Gene ID 101712890

Database interlinks

Part of NW_004624779.1 (Scaffold)

For more information consult the page for NW_004624779.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC39A6 ENSCPOG00000005612 (Guinea pig)

Gene Details

solute carrier family 39 (zinc transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005058, Guinea pig)

Protein Percentage 95.63%
CDS Percentage 94.63%
Ka/Ks Ratio 0.11655 (Ka = 0.0203, Ks = 0.1744)

SLC39A6 ENSG00000141424 (Human)

Gene Details

solute carrier family 39 (zinc transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000269187, Human)

Protein Percentage 91.92%
CDS Percentage 91.42%
Ka/Ks Ratio 0.15048 (Ka = 0.041, Ks = 0.2726)

Slc39a6 ENSMUSG00000024270 (Mouse)

Gene Details

solute carrier family 39 (metal ion transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064667, Mouse)

Protein Percentage 86.75%
CDS Percentage 84.43%
Ka/Ks Ratio 0.11691 (Ka = 0.0711, Ks = 0.6077)

Slc39a6 ENSRNOG00000028703 (Rat)

Gene Details

solute carrier family 39 (zinc transporter), member 6 (Slc39a6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034256, Rat)

Protein Percentage 87.98%
CDS Percentage 84.56%
Ka/Ks Ratio 0.10634 (Ka = 0.0661, Ks = 0.6215)

Genome Location

Sequence Coding sequence

Length: 2199 bp    Location: 10433294..10400581   Strand: -
Raw sequence   
>XM_004855226.1
ATGGCGAGGAATTTATCTGTAATCTTGGTGCTGACCTTTGCCTTGTTGGTCACAAATTCCCTTCATGAACTAGAATCAGCTGCTGCTTTCTCTCAGACCACTGAGAAAATTAATCTAAATTGGGAATCTGGCATTAATGTTGACACAGCAGTGACCTCTCGGCAACATCATCTACAGCAGCTTTTCTACCGCTATGGAGAGAACAATTCCTTGTCAATTGAAGGGTTCAGAAAACTGCTTCAGAATATAGGCATAGAAAAGATTAAAAGAATCCATACCCACCATGACCATGAGCATCACTCTGACCACGATCGTCACACTCATCATAATCATGCTGCTTCTGGTAAAAATAATCGGAAAGCTGTTTGTCCAGACCATGACTCTGATGGTTCAGGTAAAGATCGTAGAAACAGCCAGGGGAAAGGATCTCACCGCCTGCAACATGCCAGTGGTAGAAAGAATGGCAAGGAGGTTGTCAGTGCTGGTGAAGTGACCTCAACCATGTATAACACTGTCTCTGAAGGAACTCACTTTCTAGAGACAATAGAGACTCCAAAACCTGGAAAACTCCCCAAAGAAGTAACCAGTTCCACCCCACCCAGCATCACAGAAAGGAGCTGGGTGGGACTGCTGGTTGGTAGGAAAACCAATGAGTCTGTGAGTGAGCCCAGAAAGGGCTTCATGTATTCGAGAAACATAAATGACAATATTCAGGAGTGTTTCAATGCATCAAAGCTGCTTATGTCTCATGGCATGAGCATCCAGGTTCCACTGAATGCAACGGAGTTCAGCTATCTCTGCCCAGCCATTATCAATCAAATTGACGCCAGATCTTGTCTGATTCATTCAACGAGTGAGAAGAAGGCTGAAATCCCACCAAAAACCTATTCTTTACAAATAGCCTGGGTTGGTGGCTTTATAGCCATTTCCATCATCAGTGTCCTGTCTTTGCTGGGGGTTATCTTGGTGCCTCTCATGAATCGGGTGTTTTTCAAATTTCTCCTAAGTTTCCTTGTGGCATTGGCCGTTGGGACTTTGAGTGGTGATGCTTTATTACACCTTCTTCCACATTCTCATGCAAATCACCACCACAGTCATAGCCACGAAGAGCAATCAATGGAAATGAAAAGAGGCCCACTTTTCAGTCATCTGTCTTCTCAAAACATAGAAGAAAGTTCCTATTTTGATTCTACCTGGAAAGGTCTGACAGCTCTAGGAGGCTTGTATTTCATGTTTCTTGTTGAACACGTACTCACATTGATCAAGCAATTTAAAGATAAGAAGAAAAAGAATCAAAAAAAGCCTGAAAATGATGATGACATGGAGATTAAGAAGCAGTTGTCCAAGTATGAGTCTCAACTTTCAACAAACGAGGAGAAAGTAGATGCAGATGACCGAACTGAAGGGTATTTACGGGCAGATTCACAAGAGCCGTCCCACTTCGATTCTCAGCAGCCAGCAATCTTGGAAGAAGAAGAAGTCATGATAGCTCATGCTCATCCACAAGAAGTCTACAATGAATATGTACCCAGAGGGTGCAAGAACAAATGCCATTCACATTTCCATGATACACTGGGCCAGTCGGATGACCTCATTCACCACCATCATGACTACCATCATATTCTCCATCACCACCACCACCAGAACCATCACCCGCACAGTCACAGTCAGCGCTACTCTCGGGAGGAGCTGAAAGATGCTGGCATTGCCACTTTGGCTTGGATGGTGATAATGGGTGATGGTCTGCACAACTTCAGCGATGGCCTAGCAATTGGTGCTGCTTTCACTGAGGGCTTATCAAGTGGATTAAGTACTTCTGTTGCTGTGTTCTGTCATGAGTTGCCTCATGAATTAGGTGACTTTGCTGTCTTACTAAAGGCTGGCATGACTGTTAAGCAGGCTGTGCTTTATAATGCATTGTCAGCCATGCTGGCCTATCTTGGAATGGCAACAGGAATTTTCATTGGGCATTATGCTGAAAATGTTTCCATGTGGATATTTGCACTTACTGCTGGCTTATTCATGTATGTCGCTCTGGTTGATATGGTCCCTGAGATGTTACATAATGATGCTAGTGACCATGGATGTAGCCGTTGGGGATATTTCTTTTTACAGAATGCTGGAATACTTTTGGGTTTTGGTATTATGTTACTTATTTCCATATTTGAACATAAAATTGTGTTTCGTATAAATTTCTAA

Related Sequences

XP_004855283.1 Protein

Slc39a6 PREDICTED: zinc transporter ZIP6 [Heterocephalus glaber]

Length: 732 aa      View alignments
>XP_004855283.1
MARNLSVILVLTFALLVTNSLHELESAAAFSQTTEKINLNWESGINVDTAVTSRQHHLQQLFYRYGENNSLSIEGFRKLLQNIGIEKIKRIHTHHDHEHHSDHDRHTHHNHAASGKNNRKAVCPDHDSDGSGKDRRNSQGKGSHRLQHASGRKNGKEVVSAGEVTSTMYNTVSEGTHFLETIETPKPGKLPKEVTSSTPPSITERSWVGLLVGRKTNESVSEPRKGFMYSRNINDNIQECFNASKLLMSHGMSIQVPLNATEFSYLCPAIINQIDARSCLIHSTSEKKAEIPPKTYSLQIAWVGGFIAISIISVLSLLGVILVPLMNRVFFKFLLSFLVALAVGTLSGDALLHLLPHSHANHHHSHSHEEQSMEMKRGPLFSHLSSQNIEESSYFDSTWKGLTALGGLYFMFLVEHVLTLIKQFKDKKKKNQKKPENDDDMEIKKQLSKYESQLSTNEEKVDADDRTEGYLRADSQEPSHFDSQQPAILEEEEVMIAHAHPQEVYNEYVPRGCKNKCHSHFHDTLGQSDDLIHHHHDYHHILHHHHHQNHHPHSHSQRYSREELKDAGIATLAWMVIMGDGLHNFSDGLAIGAAFTEGLSSGLSTSVAVFCHELPHELGDFAVLLKAGMTVKQAVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDASDHGCSRWGYFFLQNAGILLGFGIMLLISIFEHKIVFRINF