Details from NCBI annotation

Gene Symbol Rprd1a
Gene Name regulation of nuclear pre-mRNA domain containing 1A
Entrez Gene ID 101712526

Database interlinks

Part of NW_004624779.1 (Scaffold)

For more information consult the page for NW_004624779.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPRD1A ENSCPOG00000012508 (Guinea pig)

Gene Details

regulation of nuclear pre-mRNA domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011253, Guinea pig)

Protein Percentage 94.57%
CDS Percentage 92.27%
Ka/Ks Ratio 0.1127 (Ka = 0.0331, Ks = 0.2935)

RPRD1A ENSG00000141425 (Human)

Gene Details

regulation of nuclear pre-mRNA domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000381984, Human)

Protein Percentage 99.36%
CDS Percentage 95.19%
Ka/Ks Ratio 0.01615 (Ka = 0.003, Ks = 0.1864)

Rprd1a ENSMUSG00000040446 (Mouse)

Gene Details

regulation of nuclear pre-mRNA domain containing 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043618, Mouse)

Protein Percentage 98.08%
CDS Percentage 91.67%
Ka/Ks Ratio 0.02315 (Ka = 0.0088, Ks = 0.3781)

Rprd1a ENSRNOG00000016036 (Rat)

Gene Details

Protein Rprd1a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021624, Rat)

Protein Percentage 98.08%
CDS Percentage 91.24%
Ka/Ks Ratio 0.02344 (Ka = 0.009, Ks = 0.3826)

Genome Location

Sequence Coding sequence

Length: 939 bp    Location: 10371184..10301876   Strand: -
>XM_004855225.1
ATGTCCGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCTTGTCCCTGTGGCTCATCCATCACCGCAAGCACTCGCGGCCCATCGTCACTGTGTGGGAGCGGGAGCTACGGAAAGCCAAGCCCAACAGAAAGCTTACTTTTCTCTACCTAGCCAATGATGTCATTCAAAACAGCAAAAGGAAGGGGCCAGAGTTTACAAAAGACTTTGCACCTGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGTGTTATCTATTTGGGAAGAAAGATCTGTTTATGAAAATGATGTATTAGACCAACTTAAGCAAGCTCTATATGGTGATAAGAAGCCTAGGAAGCGAACTTATGAACAGATAAAAGCAGATGAAAATGAAAATTGTTCCTCTCTGGGATCTCCAAGTGAACCACCACAGACTTTAGATCTTGTTAGAGCATTACAAGATCTAGAAAATGCAGCTTCAGGTGATGCAGCGGTTCATCAGAGGATAGCTTCTTTGCCTGTTGAAGTCCAAGAAGTGTCCCTACTAGATAAAATAACAGATAAAGAATCTGGAGAACGGCTTTCTAAAATGGTAGAGGATGCTTGTATGTTGCTGGCAGATTACAATGGCAGATTGGCAGCAGAAATAGATGATAGGAAGCAACTCACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGAATACAAGCGCAAGTTAGCCAGAGTTTCCCTGGTGCGCAAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGATTTATCTCGATTGCCCAATGTCACTGGCAGCCACATGCATCTGCCTTTTGCTGGGGACATCTACAGTGAAGATTGA

Related Sequences

XP_004855282.1 Protein

Rprd1a PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1A [Heterocephalus glaber]

Length: 312 aa      View alignments
>XP_004855282.1
MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLDQLKQALYGDKKPRKRTYEQIKADENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED