Details from NCBI annotation

Gene Symbol Gpc5
Gene Name glypican 5, transcript variant X3
Entrez Gene ID 101726554

Database interlinks

Part of NW_004624779.1 (Scaffold)

For more information consult the page for NW_004624779.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPC5 ENSCPOG00000000080 (Guinea pig)

Gene Details

glypican 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000071, Guinea pig)

Protein Percentage 86.34%
CDS Percentage 88.12%
Ka/Ks Ratio 0.2638 (Ka = 0.08, Ks = 0.3033)

GPC5 ENSG00000179399 (Human)

Gene Details

glypican 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000366267, Human)

Protein Percentage 85.22%
CDS Percentage 85.22%
Ka/Ks Ratio 0.19402 (Ka = 0.0877, Ks = 0.4523)

Gpc5 ENSMUSG00000022112 (Mouse)

Gene Details

glypican 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022707, Mouse)

Protein Percentage 83.37%
CDS Percentage 83.23%
Ka/Ks Ratio 0.16725 (Ka = 0.0949, Ks = 0.5672)

Gpc5 ENSRNOG00000008631 (Rat)

Gene Details

glypican 5 (Gpc5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054472, Rat)

Protein Percentage 86.35%
CDS Percentage 83.81%
Ka/Ks Ratio 0.09899 (Ka = 0.0683, Ks = 0.6902)

Genome Location

Sequence Coding sequence

Length: 1464 bp    Location: 1659491..1207511   Strand: -
>XM_004855187.1
ATGGGCGCGCAGACCTGGCGCGTGGGCTTCCGCTGTTTCTTCCTCCTGGCTCTCTTTGGGGCCGCCCGAAGCGAGGGCGTGCAGACCTGCCAAGAAGTTCGGAAACTTTTCCAGTGGCGGCTCGCGGGAGCCGTCCAGGGGCTGCCGGATTCGCCACAGGCAGGACCTGATCTTCAGGTTTGCATATCCAAAAAACCAACATGTTGCACCAGGAAGATGGAGGAGAGATATCAAATTGCAGCTCGCCAAGATCTGCAGCAGGTGCTTCAGACATCCAGCTCTACCTTAAAGCTGCTCATATCTCGAAATGCAGCTGCTTTTCAAGAAACCCTTGAAACTCTCCTCAGACAGGCAGAAAATTACACCAGTATACTTTTCTGCAACACCTACAGGAACATGGCCTTAGAAGCTGCCACTTCCATTCAAGAGTTCTTCACTGATGTGGGACTCTATTTGTTTGGGGCAGATGTCAATCCTGAAGAATTTGTGAACAGGTTTTTTGACAGTCTTTTTCCTCTGGTCTACAACCATCTCATTGATCCCGGTGTGACCGACAGCTCCCTGGAATACTCAGAATGTGTCCGCATGGCTTGGAAGGATATTAGTCCATTTGGCAATATTCCCAAAAGAGTAAGGGGGCAGATGGGGAGGTCTCTGCTGCCCAGCCGCACGTTTCTGCAGGCTCTCAATCTTGGCATTGAAGTCATCAACACCACAGAGCATCTCCACTTCTCCAAAGAGTGCGGCAGAGCCCTCCTGAGGATGCAGTACTGCCCGCATTGTCAGGGCCTGACTCTCAGTAAGCCATGTATGGGATACTGTCTTAATGTCGCCAGGGGCTGCCTGGCGCACATGGCAGAGCTTAATCCACACTGGTATGCATACATCCGGTCCTTGGAAGAGCTGTCAAATGCCATGCATGGGACTTACGACGTTGAACATGTGCTGTTGAACTTCCACTTGCTGGTTAACGATGCCGTGTTGCAGGCTCACGTCAATGGGCACAAGTTATTGGAACAGGTGAATAAGATCTGTGGCCGTCCAGTAAGAGCACCCACACAAAGCCCTCGTTGTTCTTTTGATCCAAGTAAGGAGAAGCACGGAATGAAGATCTCTGTAAGGAATGGTGAAGAGACGCTTGCCAACAGAAGAAAAGATTTTATCAACAGCCTGCGATTGCACAGGTTGTTCTACGGTGGCCTGGCTGATCAGCTTTGCGCTAATGACCTGGCTGCTGCTGACGGACTGCCCTGCTGGGATGGAGAGGAACTGGCACAAAGCTATACTCAGCGTGTGGTTGGAAATGGAATCAAAGCCCAATCTGGAAATCCTGAAGTCAAAGTCAAAGGATCTGATCCAGTAATAAATCAGATAATTGATAAACTAAAGCATATAATACAGGGTCAGTGGTGCAATGGTATATTAACAGGAGAACAGTCCGTATCTGTGAAAAACAAGCCATAA

Related Sequences

XP_004855244.1 Protein

Gpc5 PREDICTED: glypican-5-like isoform X3 [Heterocephalus glaber]

Length: 487 aa      View alignments
>XP_004855244.1
MGAQTWRVGFRCFFLLALFGAARSEGVQTCQEVRKLFQWRLAGAVQGLPDSPQAGPDLQVCISKKPTCCTRKMEERYQIAARQDLQQVLQTSSSTLKLLISRNAAAFQETLETLLRQAENYTSILFCNTYRNMALEAATSIQEFFTDVGLYLFGADVNPEEFVNRFFDSLFPLVYNHLIDPGVTDSSLEYSECVRMAWKDISPFGNIPKRVRGQMGRSLLPSRTFLQALNLGIEVINTTEHLHFSKECGRALLRMQYCPHCQGLTLSKPCMGYCLNVARGCLAHMAELNPHWYAYIRSLEELSNAMHGTYDVEHVLLNFHLLVNDAVLQAHVNGHKLLEQVNKICGRPVRAPTQSPRCSFDPSKEKHGMKISVRNGEETLANRRKDFINSLRLHRLFYGGLADQLCANDLAAADGLPCWDGEELAQSYTQRVVGNGIKAQSGNPEVKVKGSDPVINQIIDKLKHIIQGQWCNGILTGEQSVSVKNKP