Sequence details NCBI ID: XM_004855173.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dcc
Gene Name deleted in colorectal carcinoma, transcript variant X4
Entrez Gene ID 101705571

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DCC ENSG00000187323 (Human)

Gene Details

deleted in colorectal carcinoma

External Links

Gene Match (Ensembl Protein ID: ENSP00000389140, Human)

Protein Percentage 96.77%
CDS Percentage 92.25%
Ka/Ks Ratio 0.05338 (Ka = 0.0158, Ks = 0.2951)

Dcc ENSMUSG00000060534 (Mouse)

Gene Details

deleted in colorectal carcinoma

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110593, Mouse)

Protein Percentage 95.62%
CDS Percentage 89.33%
Ka/Ks Ratio 0.05134 (Ka = 0.0225, Ks = 0.4377)

Dcc ENSRNOG00000033099 (Rat)

Gene Details

deleted in colorectal carcinoma (Dcc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063072, Rat)

Protein Percentage 95.45%
CDS Percentage 88.65%
Ka/Ks Ratio 0.04826 (Ka = 0.0233, Ks = 0.483)

Genome Location

Sequence Coding sequence

Length: 4182 bp    Location: 15979350..17225156   Strand: +
Raw sequence   
>XM_004855173.1
ATGGAGAATAGTCTTGGATGTGTTTGGGTACCCAAGCTGGCTTTTGTACTCTTCGGAGCTTCCCTGCTCAGCGCGCATCTTCAAGTCGCCGGTTTCCAAATTAAAGCTTTCACGTCCCTGCACTTCCTGTCAGAACCTTCTGATGCTGTCACAATGCGGGGAGGAAATGTCCTTCTAAACTGCTCTGCAGAGTCCGACCGAGGAGTTCCAGTTATCAAGTGGAAGAAAGATGGCATCCACCTACCCTTGGGAACAGATGAAAGGAAGCAGCAACTTCCAAATGGGTCTCTGTTGATACAAAACATACTTCATTCCAGACACCATAAGCCAGATGAGGGAGTTTACCAATGTGAGGCATCTTTGGGAGATTCTGGGTCAATTATTAGTCGCACAGCAAAAGTTGCAGTAGCAGGACCACTAAGGTTCCTTTCCCAGACAGAGTCTGTGACAGCCTTCATGGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGGGGAGCCTATGCCAACAATACACTGGCAGAGAAATCAACAAGACCTTACCCCAATACCCGGAGACTCCCGAGTGGCGGTCTTGCCCTCTGGATCACTGCAGATCAGCCGACTTCAAGCAGGGGACATTGGGATCTATCGATGCTCCGCTCGGAATCCAGCCAGCTCAAGGATAGGAAATGAAGCAGAAGTCAGAATTTTGTCAGATCCAGGACTGCACAGACAGCTATATTTTCTGCAGAGACCATCCAATGTTGTAGCCGTTGAGGGGAAAGATGCTGTCCTGGAGTGTTGTGTCTCTGGCTATCCTCCGCCAAGTTTTACCTGGTTACGAGGAGAGGAAGTTGTCCAACTCAGGTCTAAAAAGTATTCTCTATTGGGTGGAAGCAACTTGCTTATCTCCAATGTGACAGATGATGACAGTGGAACTTACACCTGTGTTGTCACCTATAAGAATGAGAATATCAGTGCCTCTGCAGAGCTCACAGTCTTGGTTCCACCATGGTTTTTAAATCACCCTTCCAACCTCTATGCCTATGAAAGCATGGATATTGAGTTTGAATGTTCAGTCTCTGGAAAGCCTGTGCCCACTGTGAATTGGATGAAGAATGGAGATGTGGTCATTCCTAGTGATTATTTTCAGATAGTGGGAGGAAGCAACTTGCGGATCCTGGGGGTTGTAAAGTCAGATGAAGGCTTTTATCAGTGTGTGGCTGAAAATGAAGCTGGCAATGCCCAAACCAGTGCACAGCTCATTGTCCCTAAGCCAGCTGTCCTCAGCTCCAGCGTCCTCCCTTCTGCTCCCAGAGACGTGGTCCCTGTCCTGGTTTCCAGTCGATTTGTCCGTCTCAGCTGGCGACCACCTGCAGAACCAAAAGGAAATATTCAAACCTTCACAGTCTTTTTCTCCAGAGAGGGTGACAACAGGGAACGAGCATTGAATACAACCCAGCCTGGGTCCCTTCAGCTTACTGTGGGAAACCTGAAACCAGAAGCCATGTACACCTTCCGAGTTGTTGCCTACAACGAGTGGGGACCGGGGGAGAGTTCTCAACCAATCAAGGTGGCCACTCAGCCTGAATTGCAAGTTCCAGGCCCAGTAGAAAACCTGCAAGCTGTATCTACCTCACCTACCTCAATTCTGATTACCTGGGAACCCCCTGCCTATGCAAATGGTCCAGTCCAAGGTTACAGATTGTTCTGCACTGAGGCATCTACAGGGAAAGAACAGAATATAGAAGTTGATGGACTGTCTTATAAACTGGAAGGACTGAAAAAATTCACGGAATATACTCTTCGATTCTTAGCTTATAATCGCTATGGGCCAGGAGTATCTACTGATGATATAACAGTAGTTACACTTTCTGATGTGCCAAGTGCCCCGCCCCAGAACATCTCCCTGGAAGTGGTTAACTCAAGGAGTATCAAAGTAAGCTGGCTTCCTCCTCCATCAGGAACACAAAATGGATTTATTACTGGCTATAAAATTCGACACAGAAAGACAACCCGCAGGGGTGAGATGGAAACACTGGAGCCAAACAACCTCTGGTACCTATTCACAGGGCTGGAGAAGGGAAGTCAATACAGTTTCCAAGTGTCAGCCATGACTGTCAACGGCACTGGGCCACCTTCCAACTGGTACACAGCAGAGACCCCAGAGAACGATCTAGATGAGTCTCAAGTGCCCGACCAGCCAAGCTCTCTTCATGTGAGGCCCCAGACCAACTGCATCATCATGAGCTGGACCCCACCCTTGAACCCGAACATTGTGGTGCGAGGTTACATCATTGGGTATGGCGTTGGTAGTCCTTACGCTGAGACGGTGCGTGTGGACAGTAAGCAGCGATATTATTCCATTGAGAGGTTAGAGTCAAGTTCCCATTATGTAATCTCCCTAAAAGCTTTTAACAATGCAGGAGAAGGCGTTCCTCTGTATGAAAGTGCCACCACCAGATCTATAACAGATCCCACTGACCCAGTTGACTATTACCCTTTGCTTGATGATTTCCCCACCTCCGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTGCAAGCTGTGGCTCTTACTCATGAGGCTGTGAGGGTCAGCTGGGCAGACAACTCTGTCCCTAAAAACCAAAAATCATCTGAAGTACGGCTGTACACCGTCCGGTGGAGGACCAGCTTTTCTGCCAGTGCCAAGTACAAGTCAGAAGACACAACTTCTCTCAGCTACACAGCAACAGGCCTCAAACCAAACACAATGTATGAGTTCTCAGTCATGGTAACAAAAAACAGAAGGTCCAGCACATGGAGCATGACTGCACATGCCACCACATATGAAGCAGCCCCAACCTCTGCTCCCAAGGATTTGACCGTCATTACTCGGGAAGGGAAGCCTCGTACTGTCATTGTGAGCTGGCAGCCTCCCTTGGAAGCTAATGGTAAAATCACTGCTTACATTTTGTTTTATACCTTGGATAAGAACATACCAATTGATGACTGGATTATGGAAACAATCAGTGGCGATCGGCTTACTCATCAAATTATGGATCTCAACCTTGATACAATGTATTACTTTCGAATTCAAGCTCGAAATGCAAAAGGAGTTGGGCCCCTCTCTGATCCCATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAATGGCTAATGACCAAGGTCGTCATGGAGATGGAGGTTATTGGCCAGTTGATACAAATTTAATTGATAGAAGCACTCTCAATGAGCCACCCATTGGACAGATGCACCCTCCACATGGCAGTGTCACACCTCAGAAGAATAGCAACCTCCTTGTGATCATTGTGGTCACTGTTGGTGTCATCACAGTGCTTGCTATAGTGATCGTGGCAGTTATTTGCAGCCGGCGCTCTTCAGCTCAACAGAGAAAGAAACGGGCCACTCACAGTGTGGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACCCCCTGATCTTTGGATCCATCATGAAGAAATGGAGATGAAAAATATTGAGAAGCCATCAGGCACTGACCCTGCAGGAAGGGACTCCCCCATCCAAAGTTGCCAAGACCTCACGCCAGTCAGTCACAGCCAGTCAGAAACCCAACTGGGGAGTAAAAGCACTTCTCATTCTGGTCAAGACACTGAGGAAGCAGGGAGCTCCATGTCCACACTGGAGAGGTCACTGGCTGCACGCAGAGCCACTCGCGCTAAGCTCATGATTCCGATGGAGGCCCAGGCCAACAATCCAGCAGTGAGTGAAGGACCAACCACCCAACAAGCATCCATGCTGCCCCCAGCCCAGCCTGAGCATCCCAGCAGTGAGGAGGCGCCAAGCAGAACCATCCCCACAGCATGTGTTCGACCAACTCATCCACTCCGCAGCTTTGCTAACCCTTTGCTACCTCCACCAATGGGTGCAATAGAACCGAAAGTCCCTTACACACCACTTTTGTCTCAGCCAGGACCCACTCTTCCCAAGTCTCATGTTAAAACAGCTTCTCTCGGGCTGGCTGGAAAAGCGAGATCCCCTCTGCTTCCCGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAACCACAAACCAACAGAGGATGCAGCCAACGTGTATGAACAGGATGATTTGAGTGAACAAATGGCAAGTTTGGAAGGGCTAATGAAGCAACTTAATGCCATCACGGGCTCGGCGTTTTAA

Related Sequences

XP_004855230.1 Protein

Dcc PREDICTED: netrin receptor DCC-like isoform X4 [Heterocephalus glaber]

Length: 1393 aa      
>XP_004855230.1
MENSLGCVWVPKLAFVLFGASLLSAHLQVAGFQIKAFTSLHFLSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGIHLPLGTDERKQQLPNGSLLIQNILHSRHHKPDEGVYQCEASLGDSGSIISRTAKVAVAGPLRFLSQTESVTAFMGDTVLLKCEVIGEPMPTIHWQRNQQDLTPIPGDSRVAVLPSGSLQISRLQAGDIGIYRCSARNPASSRIGNEAEVRILSDPGLHRQLYFLQRPSNVVAVEGKDAVLECCVSGYPPPSFTWLRGEEVVQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECSVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQTSAQLIVPKPAVLSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEPKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEASTGKEQNIEVDGLSYKLEGLKKFTEYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNISLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDLDESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSVPDLSTPMLPPVGVQAVALTHEAVRVSWADNSVPKNQKSSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKPRTVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARNAKGVGPLSDPILFRTLKVEHPDKMANDQGRHGDGGYWPVDTNLIDRSTLNEPPIGQMHPPHGSVTPQKNSNLLVIIVVTVGVITVLAIVIVAVICSRRSSAQQRKKRATHSVGKRKGSQKDLRPPDLWIHHEEMEMKNIEKPSGTDPAGRDSPIQSCQDLTPVSHSQSETQLGSKSTSHSGQDTEEAGSSMSTLERSLAARRATRAKLMIPMEAQANNPAVSEGPTTQQASMLPPAQPEHPSSEEAPSRTIPTACVRPTHPLRSFANPLLPPPMGAIEPKVPYTPLLSQPGPTLPKSHVKTASLGLAGKARSPLLPVSVPTAPEVSEENHKPTEDAANVYEQDDLSEQMASLEGLMKQLNAITGSAF