Details from NCBI annotation

Gene Symbol Smad4
Gene Name SMAD family member 4, transcript variant X1
Entrez Gene ID 101703764

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMAD4 ENSCPOG00000006470 (Guinea pig)

Gene Details

SMAD family member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005827, Guinea pig)

Protein Percentage 99.82%
CDS Percentage 97.46%
Ka/Ks Ratio 0.00869 (Ka = 0.0009, Ks = 0.098)

SMAD4 ENSG00000141646 (Human)

Gene Details

SMAD family member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000341551, Human)

Protein Percentage 99.09%
CDS Percentage 96.14%
Ka/Ks Ratio 0.02721 (Ka = 0.0042, Ks = 0.1532)

Smad4 ENSMUSG00000024515 (Mouse)

Gene Details

SMAD family member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025393, Mouse)

Protein Percentage 98.91%
CDS Percentage 91.53%
Ka/Ks Ratio 0.0132 (Ka = 0.0051, Ks = 0.3878)

Smad4 ENSRNOG00000015634 (Rat)

Gene Details

mothers against decapentaplegic homolog 4

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021113, Rat)

Protein Percentage 93.64%
CDS Percentage 87.21%
Ka/Ks Ratio 0.10052 (Ka = 0.0493, Ks = 0.49)

Genome Location

Sequence Coding sequence

Length: 1659 bp    Location: 14570347..14625148   Strand: +
>XM_004855168.1
ATGGACAATATGTCTATTACGAATACACCAACAAGTAATGATGCTTGCCTGAGCATTGTACATAGTTTGATGTGCCATAGACAGGGTGGAGAAAGTGAAACATTTGCAAAAAGAGCAATTGAAAGTTTAGTAAAGAAGCTGAAGGAGAAAAAAGATGAATTGGATTCTTTAATAACAGCTATAACTACAAATGGAGCTCATCCTAGCAAATGTGTTACCATACAGAGAACATTGGATGGAAGGCTTCAGGTGGCTGGTCGGAAAGGATTTCCTCATGTGATCTATGCCCGACTGTGGAGGTGGCCTGATCTTCACAAAAATGAACTGAAGCACGTTAAATATTGTCAGTATGCATTTGATTTAAAATGTGATAGTGTCTGTGTGAATCCATATCACTATGAACGAGTTGTATCACCTGGAATTGATCTCTCAGGATTAACACTGCAGAGTAATGCTCCACCAAGTATGTTGGTGAAGGATGAATATGTTCATGACTTTGAGGGACAGCCATCGTTATCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTGCATCAGCAGAGACATACAGCACTCCAGCTCTGTTGGCCCCATCTGAGTCTAATGCTACCAGCACCACAAACTTTCCCAACATTCCTGTGGCTTCTACAAGTCAGCCTGCCAGTATTCTGGCAGGCAGCCATAGTGAAGGACTGTTGCAGATAGCTTCAGGGCCTCAGCCAGGACAGCAGCAGAATGGATTTACTGGTCAGCCAGCTACTTACCATCATAACAGCACTACCACCTGGACTGGAAGTAGAACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAGCACCACCCGCCTATGCCGCCCCATCCTGGACATTACTGGCCAGTTCACAATGAGCTTGCATTCCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTATTGGTGTTCCATTGCTTACTTTGAAATGGATGTTCAGGTAGGAGAGACATTTAAGGTTCCTTCAAGCTGCCCTATTGTAACTGTTGATGGATACGTGGATCCTTCTGGAGGAGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCCATTGAGAGAGCAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGGTGAAGGTGATGTTTGGGTCAGGTGCCTTAGTGACCATGCAGTCTTTGTACAGAGTTACTACTTAGACAGAGAAGCTGGACGTGCACCTGGAGATGCTGTTCATAAGATCTACCCAAGTGCGTATATAAAGGTCTTTGACTTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCAGCTACTGCGCAAGCTGCAGCAGCTGCCCAAGCAGCAGCCGTGGCAGGAAACATCCCTGGTCCTGGATCAGTAGGTGGAATAGCTCCGGCTATTAGTCTGTCAGCGGCTGCCGGCATTGGTGTAGATGACCTTCGTCGCTTATGCATACTCAGGATGAGCTTTGTGAAAGGCTGGGGACCTGATTACCCAAGACAGAGTATCAAAGAAACGCCTTGCTGGATTGAGATTCACTTACACCGGGCCCTCCAACTTCTAGATGAAGTACTTCATACCATGCCTATTGCAGATCCACAACCTTTAGACTGA

Related Sequences

XP_004855225.1 Protein

Smad4 PREDICTED: mothers against decapentaplegic homolog 4 isoform X1 [Heterocephalus glaber]

Length: 552 aa      View alignments
>XP_004855225.1
MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPPSMLVKDEYVHDFEGQPSLSTEGHSIQTIQHPPSNRASAETYSTPALLAPSESNATSTTNFPNIPVASTSQPASILAGSHSEGLLQIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD