Details from NCBI annotation

Gene Symbol Cxxc1
Gene Name CXXC finger protein 1, transcript variant X4
Entrez Gene ID 101698776

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CXXC1 ENSCPOG00000020250 (Guinea pig)

Gene Details

CXXC finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018559, Guinea pig)

Protein Percentage 99.1%
CDS Percentage 94.83%
Ka/Ks Ratio 0.01499 (Ka = 0.0033, Ks = 0.2188)

CXXC1 ENSG00000154832 (Human)

Gene Details

CXXC finger protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000390475, Human)

Protein Percentage 98.02%
CDS Percentage 93.08%
Ka/Ks Ratio 0.0288 (Ka = 0.0095, Ks = 0.3287)

Cxxc1 ENSMUSG00000024560 (Mouse)

Gene Details

CXXC finger 1 (PHD domain)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025444, Mouse)

Protein Percentage 96.49%
CDS Percentage 89.21%
Ka/Ks Ratio 0.03047 (Ka = 0.0172, Ks = 0.5652)

Cxxc1 ENSRNOG00000014614 (Rat)

Gene Details

CXXC finger protein 1 (Cxxc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020472, Rat)

Protein Percentage 96.48%
CDS Percentage 89.55%
Ka/Ks Ratio 0.0323 (Ka = 0.0172, Ks = 0.5329)

Genome Location

Sequence Coding sequence

Length: 1968 bp    Location: 13914011..13908421   Strand: -
>XM_004855156.1
ATGGAAGGAGATGGTTCAGACCCAGAGCATCCAGACGCTGGGGACGACAGCAAGTCAGAGAATGGGGAGAATGCACCCATCTATTGCATTTGCCGAAAACCGGACATCAACTGCTTCATGATCGGGTGTGACAGCTGTAATGAGTGGTTCCATGGTGACTGCATCCGGATCACTGAGAAGATGGCCAAGGCCATCCGAGAGTGGTACTGTCGGGAGTGCCGAGAGAAGGACCCTAAGCTGGAGATTCGCTATCGGCACAAAAAGTCACGGGAGCGGGATGGCAATGAACGGGACAGCAGTGAGCCCCGGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCAGATCCAGACCTGCAGCGGCGGGCAGGGTCAGGGACAGGGGTTGGGGCCATGCTTGCTCGGGGCTCTGCTTCACCCCATAAATCCTCTCCACAGCCCTTGATGGCCACACCTAGTCAGCATCACCAGCAGCAACAGCAGATCAAAAGGTCAGCCCGCATGTGTGGTGAGTGTGAGGCATGCCGACGCACAGAGGACTGTGGCAACTGTGACTTCTGCCGTGACATGAAGAAATTCGGGGGCCCCAATAAGATTCGGCAGAAGTGCCGGCTGCGCCAGTGCCAGCTTCGGGCCCGGGAATCGTACAAGTACTTCCCTTCCTCGCTCTCGCCGGTGACGCCCTCAGAGTCCTTGCCAAGGCCCCGGCGGCCACCGCCCACTCAACAGCAGCCACAGCCATCACAGAAGCTGGGGCGAATGCGTGAAGACGAGGGGGCAGTGGCATCATCCACCATCAAGGAACCACCTGAGGCTACAGCCACACCTGAGCCACTGTCAGATGAGGACCTAACACTGGATCCTGACCTGTACCAAGATTTCTGTGCAGGAGCCTTTGATGACCATGGCCTGCCCTGGATGAGTGACACAGAAGAGTCTCCGTTCCTGGACCCTGCACTTCGGAAGAGGGCAGTGAAAGTGAAGCATGTAAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGAAGGAGGAAAGATACAAGCGGCATCGGCAGAAGCAGAAACACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACTACCACAGTGCCTGGGGCCTGGTTGTGTGCGTGCCGCTCAGCCAGGCTCCAAGTATTGCTCAGATGACTGTGGCATGAAGCTGGCAGCCAACCGAATCTATGAGATCCTGCCTCAGCGCATCCAGCAGTGGCAGCAGAGCCCCTGCATTGCTGAAGAGCATGGCAAGAAGCTGCTAGAACGCATTCGCCGTGAGCAGCAGAGTGCCCGCACCCGTCTTCAGGAAATGGAGCGCAGATTCCATGAGCTTGAGGCCATCATTCTTCGAGCCAAGCAGCAGGCTGTGCGCGAGGATGAGGAGAGCAATGAGAATGACAGTGATGACACAGACTTGCAGATCTTCTGTGTCTCTTGTGGGCACCCCATCAATCCCCGTGTTGCCTTGCGCCACATGGAGCGCTGCTATGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGGCCACACGACTCTTCTGTGATGTCTATAACCCTCAGAGCAAAACATACTGTAAGCGGCTCCAGGTGCTATGCCCCGAGCACTCACGGGACCCCAAAGTGCCAGCTGATGAAGTATGTGGGTGCCCCCTTGTACGTGATGTGTTTGAGCTCACAGGTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCGGCATTACTGCTGGGAGAAGTTGCGGCGTGCTGAAGTGGACTTGGAGCGTGTTCGTGTGTGGTACAAGCTGGACGAGCTATTTGAGCAGGAGCGCAATGTACGGACGGCCATGACAAACCGGGCAGGGCTACTGGCCCTGATGTTGCACCAAACGATCCAGCATGACCCACTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGA

Related Sequences

XP_004855213.1 Protein

Cxxc1 PREDICTED: cpG-binding protein isoform X4 [Heterocephalus glaber]

Length: 655 aa      View alignments
>XP_004855213.1
MEGDGSDPEHPDAGDDSKSENGENAPIYCICRKPDINCFMIGCDSCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYRHKKSRERDGNERDSSEPRDEGGGRKRPVPDPDLQRRAGSGTGVGAMLARGSASPHKSSPQPLMATPSQHHQQQQQIKRSARMCGECEACRRTEDCGNCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSESLPRPRRPPPTQQQPQPSQKLGRMREDEGAVASSTIKEPPEATATPEPLSDEDLTLDPDLYQDFCAGAFDDHGLPWMSDTEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNENDSDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR