Details from NCBI annotation

Gene Symbol Mbd1
Gene Name methyl-CpG binding domain protein 1, transcript variant X9
Entrez Gene ID 101724111

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MBD1 ENSCPOG00000001671 (Guinea pig)

Gene Details

methyl-CpG binding domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001507, Guinea pig)

Protein Percentage 91.06%
CDS Percentage 93.16%
Ka/Ks Ratio 0.43497 (Ka = 0.0533, Ks = 0.1225)

MBD1 ENSG00000141644 (Human)

Gene Details

methyl-CpG binding domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000468785, Human)

Protein Percentage 78.8%
CDS Percentage 82.69%
Ka/Ks Ratio 0.42356 (Ka = 0.1503, Ks = 0.3548)

Mbd1 ENSMUSG00000024561 (Mouse)

Gene Details

methyl-CpG binding domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095137, Mouse)

Protein Percentage 67.64%
CDS Percentage 76.74%
Ka/Ks Ratio 0.47096 (Ka = 0.224, Ks = 0.4757)

Mbd1 ENSRNOG00000024104 (Rat)

Gene Details

methyl-CpG binding domain protein 1 (Mbd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037640, Rat)

Protein Percentage 65.67%
CDS Percentage 75.48%
Ka/Ks Ratio 0.51553 (Ka = 0.2481, Ks = 0.4812)

Genome Location

Sequence Coding sequence

Length: 1812 bp    Location: 13907543..13892179   Strand: -
>XM_004855141.1
ATGGCTGAGGACTGGCTGGACTGCCCAGCCCTGGGCCCTGGCTGGAAGCGACGTGAAGTCTATCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTATCAGAGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTCACCCGATACCTGGGCCCTGCGTGTGACCTCAGCCTTTTCGACTTCAAACAAGGAATCTTGTGCTATTCAGCCCCTAAGGCCCGTTCTGTGGTTATTCCCAGCAAGAAACGAAAGAAGCCTTCTAAGCCAGCCAAGGCTAAGAAACGTCATGTTGGACCCCAGAGGGCTGAGGTCAGGAAAGAGACCCCAGAGGTTGAAACCAAGGATGATACTGACACAGCTCCAGCTTCATTCCCTGCACCTGGGTGCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATAGTACTGGAAGACAGCGGCTCAAGACATTGTGCAAGGACTGCCGAGCACAGAGAATTGCCTTCAACCGGGAGCAGAGGATGTTTAAGCGTGTGGGCTGTGGAGAGTGTGCAGCCTGCCAAGTAACCGAGGACTGCGGGGCCTGTTCCACCTGCCTCTTGCAGCTGCCCCATGATGTGGCCTCAGGGCTGTTCTGCAAGTGTGAGCAGAGACGCTGCCTCCGGATTGTAGAGAGGGTGAGTTCAGCAGGTGGGGTGGGCCCAAGGCTCACCCCAGCTTCTGGCCCTCATAGCCCTGACCCCTTGCATCACACCTCCGGCCCCCCACAGAGCCGAGGGTGTGGAGTGTGCCGGGGCTGTCAGACCCAAGAGGACTGTGGCCGTTGCCGAGTCTGCCTTCGCCCTCCCCGCCCTGGTGTTAGGCGCCAGTGGAGGTGTGTGCAGCGGCGCTGCCTTCGGCACCTTGCTCACCGCCTCAGTCGCCATCATCAGCGATGTCAGCGACGCCCTCCCCTGGCTGTGGCTCCCCCTGCTGGTAAGCGTGGCCGCCGCAGGGGAGGCTCTGATTCCAAGATGGTTGCCCAGCGGCACTCCCAAGCTCAGGCACTGCCTCCACCTCCTGCACCAGAGCCCCCAAAGCCTGCAGAACTGCAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCGCTGTGACTTCTGCTGTGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGCCCAGTACCGGGTCAGGGTCCGAGGAGTGGGCAGGATCGCCCCCACTTTACCCTCGTCGAAAGAGGCCCGGTTCTGCTCGACGGCCCCGTCTGGCCCCCACTGTGAAGCCCCCTTTGGCTACGCACACAGCCCGACCAGGTCGTGCCCAGGCGCCACTGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCTCCACCTGGCACCGACCTTGTGTTTTTACGGGAAGGCGCCAGCAGTCCTGTGCAGGTGCCTGGCCCTGCTACAGCTTCTACAGAAGCTCCATTGCAGGCAGTAGACCCGGGCCTGCCACCTGTGAAGCAAGAGCCACCTGACCCTGAGGAGGGAAAGGAGGAGAACAAGGATGGCTGTGTCTCCGAATCGGCCCCAGAGGAGGAGGCAGGAGGGGCTGGCACACCTGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCTTCCGGGACACAGCAGCCTGGTTGCCAAGGCTACGTAAACTCTTAACAGTAAATGAAAATGAGTATTTTACCGAACTGCAATTGAAAGAAGAAGCATTATAG

Related Sequences

XP_004855198.1 Protein

Mbd1 PREDICTED: methyl-CpG-binding domain protein 1 isoform X9 [Heterocephalus glaber]

Length: 603 aa      View alignments
>XP_004855198.1
MAEDWLDCPALGPGWKRREVYRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLFDFKQGILCYSAPKARSVVIPSKKRKKPSKPAKAKKRHVGPQRAEVRKETPEVETKDDTDTAPASFPAPGCCENCGISFSGDSTGRQRLKTLCKDCRAQRIAFNREQRMFKRVGCGECAACQVTEDCGACSTCLLQLPHDVASGLFCKCEQRRCLRIVERVSSAGGVGPRLTPASGPHSPDPLHHTSGPPQSRGCGVCRGCQTQEDCGRCRVCLRPPRPGVRRQWRCVQRRCLRHLAHRLSRHHQRCQRRPPLAVAPPAGKRGRRRGGSDSKMVAQRHSQAQALPPPPAPEPPKPAELQPYTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPSTGSGSEEWAGSPPLYPRRKRPGSARRPRLAPTVKPPLATHTARPGRAQAPLKQEAGGGFVLPPPGTDLVFLREGASSPVQVPGPATASTEAPLQAVDPGLPPVKQEPPDPEEGKEENKDGCVSESAPEEEAGGAGTPVITEIFSLGGTRFRDTAAWLPRLRKLLTVNENEYFTELQLKEEAL