Sequence details NCBI ID: XM_004855092.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Loxhd1
Gene Name lipoxygenase homology domains 1, transcript variant X2
Entrez Gene ID 101707875

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LOXHD1 ENSCPOG00000009824 (Guinea pig)

Gene Details

lipoxygenase homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008818, Guinea pig)

Protein Percentage 95.78%
CDS Percentage 93.14%
Ka/Ks Ratio 0.08569 (Ka = 0.0226, Ks = 0.2637)

LOXHD1 ENSG00000167210 (Human)

Gene Details

lipoxygenase homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000300591, Human)

Protein Percentage 92.1%
CDS Percentage 88.99%
Ka/Ks Ratio 0.08076 (Ka = 0.0414, Ks = 0.5129)

Loxhd1 ENSMUSG00000032818 (Mouse)

Gene Details

lipoxygenase homology domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094294, Mouse)

Protein Percentage 94.1%
CDS Percentage 88.35%
Ka/Ks Ratio 0.04653 (Ka = 0.0291, Ks = 0.6263)

Loxhd1 ENSRNOG00000017410 (Rat)

Gene Details

lipoxygenase homology domains 1 (Loxhd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023487, Rat)

Protein Percentage 73.0%
CDS Percentage 74.53%
Ka/Ks Ratio 0.16334 (Ka = 0.1982, Ks = 1.2134)

Genome Location

Sequence Coding sequence

Length: 6207 bp    Location: 10282085..10106975   Strand: -
Raw sequence   
>XM_004855092.1
ATGATGCCCCAGAAGAAGAAGAAGAGGAAGAAAGACATCGACTTTCTTGGCCTATATGAGGAGGAGCTGCTGAACTATGCCTCAGAGAATGATGAGGACGAACTGCAGCACGAGTACTATAAGGCCAAGGTGTACGAGGTGGTCACAGCCACCGGGGATGTTCGTGGTGCAGGGACAGATGCCAATGTCTTCATCACAATTTTTGGAGAGAATGGGCTGTCTCCTAAGCTCCATCTTACCAGCAAGAGTGAGTCTGCCTTTGAGAAAGCTAATGTCGATGTGTTCCGGGTAAGAACAAACAACGTGGGCCTCATCTATAAAATCAGGATTGAGCATGACAACACAGGCTTGAATGCCAGCTGGTACCTGGACCGTGTGATTGTGGCTGACATGAAGAGGCCTCATCTCCGTTACTACTTCAACTGCACCAACTGGCTGAGCAAGACAGAAGGTGATCGCCAATGGTGCCGTGACCTGCTGGCCAGCTTCAACCCTATGGACATGCCCAGAGGTAACAAGTATGAAATCAAGGTGTATACCGGTGACATAATTGGTGCAGGGACAGATGCTGATGTCTTCATCAATATCTTTGGAGAATATGGAGACACAGGGGAGCGTAGGCTGGAAAATGAAAAGGACAATTTTGAAAAGGGAGCTGAAGACAAGTTTATGCTGGATGCCCCAGATTTGGGGCAGCTGATCAAGATCAATGTGGGCCACAACAACAAAGGAGGGTCTGCTGGTTGGTTCCTGTCAAAGATTGTCATCGAAGATATTGGGAACAAAAGGAAATATGACTTCCCCCTGAATCGCTGGCTCGCCTTGGATGAAGATGATGGAAAAATCCAAAGGGATATCTTAGTGGGTGGAGCTGAGACCACAGCTATTACCTATATTGTCACTGTCTTCACTGGGGATATGCGAGGAGCTGGGAGCAAATCCAAAATCTACTTGGTTATGTATGGAGCCAGAGGGAAAAAGAACAGTGGGAAGATCTTCCTGGAGGGTGGTGTGTTTGATCAAGGCCGCACGGACATCTTCCACATCGAGCTGGCTGTCCTCCTCAGCCCTCTGAGTCGAGTCTCCATTGGGCATGGTAACGTGGGTGTTAACAGAGGCTGGTACTGTGAGAAGGTGGTGATTCTATGCCCCTTCACTGGCATTCAGCAGACCTTCCCCTGCAGCAACTGGCTGGATGAGAAGAAAATGGATGGGCTGATCGAGAGGCAGCTCTATGAGATGGTATCTCTGAGGAAGAAGCGGCTGAAAAAATTTCCTTGGTCTCTGTGGGTCTGGACGACTGACCTGAAGAAAGCTGGTACTAACTCTCCCATCTTCATCCAGATTTATGGGCAGAAGGGTCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCAGGCGTAATCGAGAAGTTCAGGATTGAGCTCCCAGATCTGGGCAGATTTTATAAGATTCGAGCATGGCATGATAGAAGGAATCCTGGTTCTGGATGGCATTTAGAAAGGATGACCCTGATGAACACCCTGAATAAGGACAAATATAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATCGTGAGGGAAATGACTGCAGAGGGCCCAACAGTGCGGAGGATAATGAGCATGGCCAGGTACCGTGTGACTGTGTGCACAGGGGAACTTGAAGGTGCAGAAACTGATGCCAACGTCTATCTCTGCCTTTATGGTGACGTGGGGGATACAGGGGAGCGGCTGCTCTACAACTGCAGGAATAACACTGACCTGTTTGAGAAGGGCAATGCAGATGAGTTCACCATCGAGTGTGTCACCCTGAGGAAGGTGCGGCGGGTGAGGATCAGACACGATGGCAAAGGCTCACGCAGTGGCTGGTACCTGGACCGGGTGCTAGTGAGAGAGGAGGGACAGCCAGAGAGTGACAACGTGGAGTTCCCGTGTCTCAGGTGGCTGGACAAGGACAAGGATGATGGGCAGCTGGTCCGAGAGCTGCTGCCCAGTGACAGCAACGCTACACTGAAGAACTTCCGCTATCATATCAGTGTGAAGACTTCGGATATTCCTGGGGCCAGCACGGATTCTCGGGTCTACCTTAAGCTCTATGGGGATAAATCCGACACCATCAAGCAAATTCTTCTTGTCTCTGACAACAACCTCAAGGACTATTTTGAATGTGGCCGGGTGGATGAGTTCACCCTTGAGACCCTGAACATTGGAACTATCAACCGGCTGATGATTGGGCATGACAGCACGGGCCTGCATGCAAGCTGGTTCCTGGGCAGTGTCCAGATTCGAGTGCCCCGCCAAGGCAAACAGTACACCTTCCCTGCAAACCGCTGGCTGGACAAGAACCAGGCTGATGGGCGCCTGGAGGTGGAGCTCTACCCCAGCGAGGTTGTGGAGATCCAGAAATTGGTCCACTATGAGACTGAGATTTGGACAGGGGATGTGGGTGGTGCAGGCACCACTGCCAGAGTCTACATGCAGATCTATGGTGAGAAAGGCAAGACTGAAGTGTTCTTCCTCTCCAGCCGCGCAAAAGTGTTTGATCGGGCATCCAAGGATGTGTTCCAGACAGACACCTTCACCATCTATGCCATTGACCTGGGGGCTCTGACCAAGATACGGATTCGGCATGACAACGCAGGCAACAGACCAGGGTGGTTCCTGGACAGAATAGACATCACTGACATGAACAGTGAGACCACGTATTACTTCCCATGCCAACGCTGGCTGGCAGTGGAAGAAGATGACGGCCAGCTGTCCAGGGAGCTGTTGCCAGTGGACGAGTCCTATATATTTCCCAGCAAGAATGAAGAGGGTGGGGGACATGGTGGCAATAATCCCCTTGACAACCTGGCCCTGGAGCAAAAAGATAAATCGACCACATTCTCAGTGACCATAAAGACTGGGAACAAGAAGAATGCAGGCACAGATGCCAACGTCTTCATCACGCTCTTTGGCATGCAAGATGACAATGGAATAACCCTCATGAAGTCCTCCAAGACAAACAGTGACAAGTTTGAGAGGGACAGCATTGAAATCTTCACAGTGGAGACGGTGGACCTGGGGGACCTGTGGAAAGTCAGGATCGGCCATGACAACACAGGCAAAGCCCCAGGCTGGTTTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGAAAGTGCATGACATTTCCCTGTGGCCGCTGGCTGGCCAAGAATGAAGATGATGGGGCCATCGTCAGGGACCTCTTCCACGCGGAGCTTCAGACAAGGCGGTACACACCATTTGTCCCGTACGAGATCACCCTCTACACCAGTGATGTCTTTGGTGCTGGAACAGATGCCAACATCTTCATCATCATCTATGGCTGCGATGCTGTGTGCACTCGGGAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAAGCTGTTCTTTGAGAGAAAGTCTGCCTCCCGCTTCATTGTGGAGTTAGAAGATGTGGGAGAAATCATTGAAAAAATTCGGATTGGCCATGACAATATGGGCATAAATCCTGGGTGGCACTGCTCTCATGTGGACATCCGCAGGCTCCTTCCAGACAAAGATGGTACGGAGACCTTGACTTTTCCATGTGATCGATGGCTTGCCGCCTCTGAGGATGACAAGAAGACCATTCGAGAACTGGTCCCTTATGACATCTTCACTGAGAAATACATGAAAGATGGGTCCTTACGGCAAGTCTACAAAGAAGTGGAGGAGCCTCTAGACATCGTGCTGTACTCGGTGCAGATCTTCACAGGGAACATTCCTGGGGCAGGCACAGATGCCAAGGTCTACATCACCATCTACGGGGACCTCGGGGACACTGGGGAGCGGTACCTTGGCAAGTCTGAGAACCGCACCAACAAGTTCGAGAGAGGAACGGCTGACACCTTCATAATCGAGGCTGCTGACCTGGGTGTCATTTACAAGATCAAGCTCCGCCATGACAATACCAAGTGGTATGCAGACTGGTATGTGGAGAAGGTGGAGATCTGGAATGACACCAACGAGGATGAGTTCCTATTCCTGTGTGGGCGTTGGTTGTCCCTGAAGAAAGAGGATGGGCGGTTGGAGAGGCTCTTTTATGAGAAGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCCGCTGACTTCTGGGAGATCGCTCTAAGTTCCAAGATGGCTGACGTGGACATTGACACAGTGACAGGGCCCATGGTCGACTATGTTCAAGAGGGCCCAGTTATTCCCTACTATGTATCTGTCACCACTGGGAAGCACAAGGATGCAGCCACGGACAGCCGGGCCTACGTCATACTGATTGGGGAGGAGGATGAGAGCACCAACCGCATCTGGCTGGACTACCCCCAGGGGAAGAAGGGCTTTGCCTGCAGCTCTGTGGAGGAGTTCTACGTTGGAGGCTTGGACGTGGGTGTCATCAAGAAAATAGAGCTGGGCCATGATGGGGCTTCCCCTGAGAGCTGCTGGCTGGTGGAGGAGCTGTGTCTGGCAGTGCCCACCCACGGCACCAAGTACACGCTGCGCTGCAACTGCTGGCTTGCCAAGGACCGAGGCGATGGTGTTACCTCTCGAGTCTTTGACCTCCTGGATGCCATGGTGGTAAACATCGGGGTGAAGGTGCTTTATGAAATGACAGTGTGGACGGGTGATGTGGTCGGCGGGGGCACTGACTGCAGGATCTTTATGACCCTCTATGGCATCAACGGGAGCACAGAAGAGGTACAGCTGGACAAGAAGAAGGCCAGGTTTGAGCGGGAGCAGAATGACACCTTCATCGTGGAGATACTGGACATCGCTCCATTCACCAAGATGCGGATCCGCATCGACGGCCTGGGCAGCCGGCCCGAGTGGTTCCTGGAGAGGATCCTGCTGAAGAACATGAGCACCGGAGACCTGACCATGTTCTACTATGGAGACTGGTTGTCACAGCGGAAGGGCAAGAAGACACTGGTGTGTGAGATGTGTGCCGTCATTGACGAGGAGGAGATGATGGAGTGGACATCCTATACTGTCACAGTGAAGACCAGCAATGTCCTGGGAGCAGGCACCGATGCCAACGTGTTCATCATCATCTTTGGAGAGAACGGGGACAGCGGGACCTTGGCCCTGAAGCAATCAGCCAACTGGAACAAGTTTGAGCGGAACAACACGGACACATTCAATTTCTCTGACATGCTGAGCCTAGGCCACCTCTGCAAGCTGAGGATCTGGCATGACAACAAAGGGATATTTCCTGGCTGGCACCTGAGCTATGTTGATGTGAAGGACAACTCCCGAGATGAGACCTTCCGCTTCCAGTGTGATCGCTGGCTGTCCAAGAGTGAAGGTGACAGGCAGACAGTTCGTGACATTGCATGTGCCAACAATGAGATCCGAGAAGAGCTGGAGGAGACCACCTACGAGATTGTCATAGAAACAGGCAACGAGGGTGAAACCAGGGAAAACGTCTGGCTCATCCTGGAGGGAAGGAAGAGTCGATCCAAAGAGTTTCTCGTGGAAAATTCTTCCAGACAGCGAGCCTTTAGAAAAGGGACCACAGACACATTTGAGTTTGACAGCATCTACTTAGGGGACATTGCCTCCATCTGCGTGGGACACCTGGCCAGGGAGGACCGGTTCATCCCCAAGAGAGAGCTGGTGTGGCACGTCAAGACCATCACCATCACTGAGATGGAGTACAACAATGTGTACTTCTTTAACTGCAACTGCCTCATTCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTGTTTGAGGTTACCAAGACAACAGAGAGCTTCACCAGCAAGATCCAGAGCCTGGTGCCTGTCAAGTATGAGGTCATTGTGACAACGGGCTATGAGCCAGGGGCGGGCACTGATGCCAACGTCTTTGTGACCATCTTTGGGGCCAATGGGGACACAGGCAAACGGGAGCTGAAGCAGAAAATGTGCAACCTCTTTGAGCGGGGTAGCACTGACCGCTTCTTCCTGGAGACGCTGGAGCTAGGCGAGCTGCGCAAAGTGCGACTGGAACATGATGGCAGTGGCTACTACTCAGGCTGGCTGGTGGACAAGGTGGAGGTCACCAATACCAGCAGCGGGGTGGCCACTATCTTCAGCTGTGGCAGGTGGCTGGACAAGTCCAGGGGGGATGGGCTTACCTGGAGAGACCTCTTCCCTTCTGTGTGA

Related Sequences

XP_004855149.1 Protein

Loxhd1 PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 2068 aa      View alignments
>XP_004855149.1
MMPQKKKKRKKDIDFLGLYEEELLNYASENDEDELQHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVADMKRPHLRYYFNCTNWLSKTEGDRQWCRDLLASFNPMDMPRGNKYEIKVYTGDIIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLIKINVGHNNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIVTVFTGDMRGAGSKSKIYLVMYGARGKKNSGKIFLEGGVFDQGRTDIFHIELAVLLSPLSRVSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKMDGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGQKGRTDEILLNPNNKWFKPGVIEKFRIELPDLGRFYKIRAWHDRRNPGSGWHLERMTLMNTLNKDKYNFNCNRWLDANEDDNEIVREMTAEGPTVRRIMSMARYRVTVCTGELEGAETDANVYLCLYGDVGDTGERLLYNCRNNTDLFEKGNADEFTIECVTLRKVRRVRIRHDGKGSRSGWYLDRVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISVKTSDIPGASTDSRVYLKLYGDKSDTIKQILLVSDNNLKDYFECGRVDEFTLETLNIGTINRLMIGHDSTGLHASWFLGSVQIRVPRQGKQYTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYETEIWTGDVGGAGTTARVYMQIYGEKGKTEVFFLSSRAKVFDRASKDVFQTDTFTIYAIDLGALTKIRIRHDNAGNRPGWFLDRIDITDMNSETTYYFPCQRWLAVEEDDGQLSRELLPVDESYIFPSKNEEGGGHGGNNPLDNLALEQKDKSTTFSVTIKTGNKKNAGTDANVFITLFGMQDDNGITLMKSSKTNSDKFERDSIEIFTVETVDLGDLWKVRIGHDNTGKAPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRRYTPFVPYEITLYTSDVFGAGTDANIFIIIYGCDAVCTREKFLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNMGINPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLAASEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNIPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWYADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDIDTVTGPMVDYVQEGPVIPYYVSVTTGKHKDAATDSRAYVILIGEEDESTNRIWLDYPQGKKGFACSSVEEFYVGGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTHGTKYTLRCNCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDCRIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIVEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMSTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVTVKTSNVLGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFSDMLSLGHLCKLRIWHDNKGIFPGWHLSYVDVKDNSRDETFRFQCDRWLSKSEGDRQTVRDIACANNEIREELEETTYEIVIETGNEGETRENVWLILEGRKSRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASICVGHLAREDRFIPKRELVWHVKTITITEMEYNNVYFFNCNCLIPLKRKRKYFKVFEVTKTTESFTSKIQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMCNLFERGSTDRFFLETLELGELRKVRLEHDGSGYYSGWLVDKVEVTNTSSGVATIFSCGRWLDKSRGDGLTWRDLFPSV