Sequence details NCBI ID: XM_004855072.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Setbp1
Gene Name SET binding protein 1
Entrez Gene ID 101702229

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SETBP1 ENSCPOG00000011164 (Guinea pig)

Gene Details

SET binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010038, Guinea pig)

Protein Percentage 94.81%
CDS Percentage 94.79%
Ka/Ks Ratio 0.1756 (Ka = 0.0252, Ks = 0.1437)

SETBP1 ENSG00000152217 (Human)

Gene Details

SET binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000282030, Human)

Protein Percentage 93.09%
CDS Percentage 91.57%
Ka/Ks Ratio 0.11582 (Ka = 0.0334, Ks = 0.2883)

Setbp1 ENSMUSG00000024548 (Mouse)

Gene Details

SET binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124497, Mouse)

Protein Percentage 89.56%
CDS Percentage 87.33%
Ka/Ks Ratio 0.10797 (Ka = 0.0528, Ks = 0.4886)

Setbp1 ENSRNOG00000016208 (Rat)

Gene Details

Protein Setbp1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021717, Rat)

Protein Percentage 89.99%
CDS Percentage 87.58%
Ka/Ks Ratio 0.10363 (Ka = 0.05, Ks = 0.4826)

Genome Location

Sequence Coding sequence

Length: 4782 bp    Location: 8444759..8797765   Strand: +
Raw sequence   
>XM_004855072.1
ATGGAGTCCAGGGAAATCTTGAGCAGCTCCCGGCAAAGAGGGGGTGAGTCAGAATTCCTGCCAGTCTCCTCAGCCAAGCCCCCAGCTGCTCCTGGCTGTACAGGAGAACCTTTGCTGTCCAGTCCAGGACCTGGAAAGAGCATTCCAGTGGGGGGAGAACGCATGGATCCAGAGGAGGAGGATGAACTGGGTTCAGGGAGAGATGTGGATTCCAACTCCAATGCAGACAGTGAGAAATGGGTGGCAGGAGATGGCTTGGAAGAGCAGGAGTTTTCCATCAAGGAGGCCAACTTCACTGAGGGGAGTCTGAAGCTGAAGATTCAGACCACAAAGCGGGCAAAGAAACCCCCAAAGAATCTGGAGAACTATATCTGCCCACCTGAGATCAAGATCACCATCAAGCAGTCGGGGGACCAGAAGGTGTCCCGTGCTGGGAAAAATAGCAAAGCTACGAAGGAAGAAGAAAGAAGCCACTCCAAAAAGAAGCTCCTCACAGCCAGTGATCTTGCAGCCAGCGACCTCAAAGGATTTCAGCCACAGGCTTATGAGAGGCCCCAGAAACACCCACCTCTCCATTATGAACCAGGCCTCCCACAGGACTTCACCAGTGACACCTTAAAACCAAAGCACCAGCAAAAAAGCAACAGCCAGAACCACATGGACTGGTCCACCAACTCTGACACTGGACCCTCCACTCAGAATTGCTTCATCAGTCCAGAGTCTGGCCGAGAAACTGCAAGCACCAGCAAGATCCCAGCTCTTGAGCCCGTGGCTTCCTTTGCAAAGGCCCAGGGTAAGAAAGGCAGTGCAGGGAACACATGGAGTCAGTTGTCTAGCAACAGTAAAGATCTGCTCCTGGGAGCTGTGGTTCCATCCCCCAGCAACCGCAGCTCACCAGCCCCTCCTAGCAGCGCTGCTGAGTGCAATGGGCTCCAGCCCTTGGGAGATCAAGAAGGAGGTACAAAGGAACCCCCAGAACCACCTACTACAGGCAGCAAGAAAAAGTCAAGTAAAAAAGATATGATAAGTCAAACCCTAACAAATCCAGACCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGACAACACAGAAGGGAAAAGAGAGGGTTACTCTGCAGATAATGCCCAAGAGGCATCGCCAGCCAAGCAGAACGTGAGTTCTGTCGGTAATCTTGAAAGTGACACTAGTCATGTCAGGATTACTATCCCCATCAAAGCACCCTCTCTAGATGCAGCCAGCCATAAGAGGAAAAAGAGACAGTCCATTAAAGCAGTGGTAGAAAAGATCATCCCAGAGAAAGCACTGGCTTCAGGAATCTCCATGAGCAGTGAAGTCGTTAACAGGTTACTTTCCAATGCAGAGGGAAATAAGAAAGACTCCCGTGTCCCTAAGTTGGGTAAAATGATAGAGAATGAGTCCCCCTCAGTTAGCCTCGAAACTGGTGGAAATGCAGAGAAAATCATCCCAGGAGGAATGTCTAAGCAGCGGAAACCACCCATGGTCATGACGTCCCCCACATGCACAGATCACTCCCCATCAAGAAAGCTGCCCGAAATCCAGCATCCAAAATTTGCTGCAAAACGGAGGTGGACATGCAGCAAACCAAAACCCACGAGTATGCTCCGGGAGGCAGTCATGGCCACCTCTGATAAGCTGATGGTGGAACCCCCGTCTGCTTACCCCATCACCCCAGCCAGCCCTCTGTACACCAACACCGACAGTCTTACTGTGATCACTCCAGTCAAGAAGAAGCGAGGACGACCAAAGAAGCAGCCTTTGCTCACAGTGGAGACGATTCATGAGGGTACTTCCACCAGCCCAGTCAGCCCCATCAGCCGAGAGTTTCCTGGCACCAAGAAAAGAAAGAGGCGACGCAACTTAGCTAAGTTAGCCCAGCTGGTGCCAGGAGAAGACAAACCCATGAGCGAGATGAAATTTCACAAAAAGGTTGGAAAGCTTGGCGTGTTGGACAAGAAGACCATCAAAACTATCAATAAGATGAAAACACTCAAGAGGAAAAATATCTTGAACCAGATCTTGTCCTGTTCCAGCAACATTGCCCTGAAGGCCAAAGCTCCCCCAGAGACCAGCCCTGGGGCAGCCGCAATTGAAAGCAAACTGGGCAAGCAGATTAATGTCAGCAAGAGGGGGACCATCTACATTGGCAAGAAGCGGGGCAGGAAGCCAAGAACAGAGCTGCCACCCCCATCAGAAGAACCGAAAGCAGCCATCAAGCACCCCAGGCCTGTTTCTAGCCAGCTGGATGTTCCAGCCGTGCCTTCCAACTTCCAGTCACTCGTGGCATCCTCACCAGCAGCTATGCACCCACTTTCCACACAGTTGGGTGGGTCCAATGGCAACCTGAGCCCTGCCAGCACTGAAACCAGTTTTTCAGAGTTGAAAACTATGCCAAACCTCCAGCCCATCAGTGCTCTTCCAACCAAAACCCAGAAGGGAATTCACAGCGGAACCTGGAAGCTGTCTCCACCCAGGCTGATGGCCAACTCCCCTTCACACCTGTGCGAGATAGGCTCACTAAAGGAAATCACATTGTCCCCTGTGAGTGAGTCCCACAGTGAGGAGACCATCCCAAGCGACAGCGGCATTGGGACAGACAACAACAGCACGTCTGACCAAGCGGAGAAGAGTTCAGAATCCCGACGGAGGTACTCTTTTGATTTCTGCTCCCTGGACAACCCTGAGGCCATTCCGTCTGACACCAGCACAAAGAACCGGCATGGCCACCGGCAGAAGCATCTCATTGTGGACACCTTCCTGGCCCATGAAAGCCTGAAGAAGCCAAAGCACAAGAGGAAAAGAAAAAGCCTGCAAAACCGTGATGATCTCCAGTTTCTGGCTGAACTGGAAGAGCTCATCACCAAATTCCAAGTATTCAGGATCTCCCACCGGAGTTACACCTTTTACCATGAGAATCCATATCCCAGCATTTTCCGGATTAATTTTGATCACTATTACCCGGTGCCATATATCCAGTATGACCCGTTGCTCTATCTTCGTAGGACTTCAGACTTGAAGTCAAAGAAGAAGCGTGGTAGGCCTGCAAAAACCAATGACACCATGACAAAGGTGCCTTTTTTACAAGGGTTCAGCTACCCTATTCCCAGTGGAAGTTACTATGCAGCCTATGGAATGCCTTACACATCAATGCCTATGATGAACCTGGGTTACTATGGTCAGTACCCCGCTCCTCTGTATCTATCGCACACGCTTGGAGCAGCTTCCCCGTTCATGAGGCCAACGGTGCCACCACCTCAGTTCCACACAAGCTCTCACGTGAAGATGTCTGGGGCAGCTAAGCATAAAGCAAAGCACGGAGTACACCTGCAGGGGCCAGTTGGCATGGGCCTCAGTGACATACAGCCATCGCTGAACCCTCCCAAGGTGGGTAGTGCTAGTCTGTCCAGCAGTCGGCTCCACAAGAGGAAACACAAACACAAGCATAAGCACAAGGAAGACCGGATCCTGGGGACTCATGACAACCTGAGCGGTCTCTTTGCAGGCAAAGCCACAGGCTTCTCCAGCCACCTCCTGACCGAGCGGTTGAGCAGTACAGACAAAGAGCTCCCGTTGGTGAGTGAGAAGACCAAGCATAAGGAAAAACAGAAGCACCAGCACAGTGAATCTGGCCACAAGACCTCTAAGACCAACTTTGAGGTAGACACCCTCTCTACACTGTCACTTTCAGATGCCCAGCATTGGACGCAGGCCAAGGATAAAGGTGACTTGAGTAGTGAGTCTGTGGACTCATGCACTAAAAGGTACTCTGGCAGTGGTGGAGATGGTGGCAGCACAAGAGCAGAGAGCTTGGATGTGTTCAGTGAAATGAACCCTTCCAGTGACAAGTGGGACAGTGACGTGAGTGGAAGTAAAAGGAGAAGCTTTGAAGGTTTTGGGACGTACAGGGAAAAGGACATTCAAGCCTTCAAGATGAACCGCAAGGAGAGAAGTTCATATGACTCTTCCATGTCTCCAGGGATGCCAAGTCCCCACTTGAAAGTGGACCAGATGGCAGCATACAGTAAGAACGAGGGCCCAGTGTCCACCATGATGACCAGGAAGAAGCCAGCTGCAGTTGACAGTGTTGCAATTCCACCAACCCCAGTATTATCACTTCTCGCTGCCTCCACAGCAACATCAGATGCAGCCAGCTCCTCCCTGAAGAAGCGATTCAAGCGGCGGGAGATCGAAGCCATCCAGTGCGAAGTGCGGAAGATGTGCAACTACACCAAGATCCTGTCCACCAAGAAGAACCTGGACCATGTGAACAAGATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACAGGCAACAACTTCGTCAAGAAGAGGCGAGGGCGGCCCCGCAAGCAGCCCACCCAGTTCGATGAGGACTCCAGAGACCAGATGCCCGTGCTGGAAAAATGCATCGACCTTCCCACCAAGAGGGGCCAGAAACCCAGCCTGAGCCCGCTGGTGCTGGAGCCCGCCGCCGGTCAGGACGCCGTCATGGCGACCATCGAGGCGGTCATCCACATGGCCCGCGAGGCGCCGCCCCTGCCCCCGCCCCCGCCGCCGCTGCCACCGCCCCCGCCGCCGCCACCGCCCCCGCCCCCCGCGCTGCCCAAGATCCCCCGGGGCGGGAAGAGGAAGCTCGCGCCGCCGCCCGCCGGGCAGCACGCGCAACCGTCCCCGCAGCCGCCCTTTCCCCAGGAGGAGGAGGTGAAGGCCAAAAGGTCGAGGAAGTCACGAGGGAGCGAGAGCGATGTCCTCCCCTAA

Related Sequences

XP_004855129.1 Protein

Setbp1 PREDICTED: SET-binding protein [Heterocephalus glaber]

Length: 1593 aa      View alignments
>XP_004855129.1
MESREILSSSRQRGGESEFLPVSSAKPPAAPGCTGEPLLSSPGPGKSIPVGGERMDPEEEDELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNLENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKLLTASDLAASDLKGFQPQAYERPQKHPPLHYEPGLPQDFTSDTLKPKHQQKSNSQNHMDWSTNSDTGPSTQNCFISPESGRETASTSKIPALEPVASFAKAQGKKGSAGNTWSQLSSNSKDLLLGAVVPSPSNRSSPAPPSSAAECNGLQPLGDQEGGTKEPPEPPTTGSKKKSSKKDMISQTLTNPDLDWVKSAQKAFDNTEGKREGYSADNAQEASPAKQNVSSVGNLESDTSHVRITIPIKAPSLDAASHKRKKRQSIKAVVEKIIPEKALASGISMSSEVVNRLLSNAEGNKKDSRVPKLGKMIENESPSVSLETGGNAEKIIPGGMSKQRKPPMVMTSPTCTDHSPSRKLPEIQHPKFAAKRRWTCSKPKPTSMLREAVMATSDKLMVEPPSAYPITPASPLYTNTDSLTVITPVKKKRGRPKKQPLLTVETIHEGTSTSPVSPISREFPGTKKRKRRRNLAKLAQLVPGEDKPMSEMKFHKKVGKLGVLDKKTIKTINKMKTLKRKNILNQILSCSSNIALKAKAPPETSPGAAAIESKLGKQINVSKRGTIYIGKKRGRKPRTELPPPSEEPKAAIKHPRPVSSQLDVPAVPSNFQSLVASSPAAMHPLSTQLGGSNGNLSPASTETSFSELKTMPNLQPISALPTKTQKGIHSGTWKLSPPRLMANSPSHLCEIGSLKEITLSPVSESHSEETIPSDSGIGTDNNSTSDQAEKSSESRRRYSFDFCSLDNPEAIPSDTSTKNRHGHRQKHLIVDTFLAHESLKKPKHKRKRKSLQNRDDLQFLAELEELITKFQVFRISHRSYTFYHENPYPSIFRINFDHYYPVPYIQYDPLLYLRRTSDLKSKKKRGRPAKTNDTMTKVPFLQGFSYPIPSGSYYAAYGMPYTSMPMMNLGYYGQYPAPLYLSHTLGAASPFMRPTVPPPQFHTSSHVKMSGAAKHKAKHGVHLQGPVGMGLSDIQPSLNPPKVGSASLSSSRLHKRKHKHKHKHKEDRILGTHDNLSGLFAGKATGFSSHLLTERLSSTDKELPLVSEKTKHKEKQKHQHSESGHKTSKTNFEVDTLSTLSLSDAQHWTQAKDKGDLSSESVDSCTKRYSGSGGDGGSTRAESLDVFSEMNPSSDKWDSDVSGSKRRSFEGFGTYREKDIQAFKMNRKERSSYDSSMSPGMPSPHLKVDQMAAYSKNEGPVSTMMTRKKPAAVDSVAIPPTPVLSLLAASTATSDAASSSLKKRFKRREIEAIQCEVRKMCNYTKILSTKKNLDHVNKILKAKRLQRQSKTGNNFVKKRRGRPRKQPTQFDEDSRDQMPVLEKCIDLPTKRGQKPSLSPLVLEPAAGQDAVMATIEAVIHMAREAPPLPPPPPPLPPPPPPPPPPPPALPKIPRGGKRKLAPPPAGQHAQPSPQPPFPQEEEVKAKRSRKSRGSESDVLP