Details from NCBI annotation

Gene Symbol Caprin2
Gene Name caprin family member 2, transcript variant X1
Entrez Gene ID 101725572

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPRIN2 ENSCPOG00000006625 (Guinea pig)

Gene Details

caprin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005968, Guinea pig)

Protein Percentage 90.18%
CDS Percentage 92.41%
Ka/Ks Ratio 0.34897 (Ka = 0.0545, Ks = 0.1563)

CAPRIN2 ENSG00000110888 (Human)

Gene Details

caprin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000298892, Human)

Protein Percentage 88.06%
CDS Percentage 89.73%
Ka/Ks Ratio 0.25503 (Ka = 0.0658, Ks = 0.258)

Caprin2 ENSMUSG00000030309 (Mouse)

Gene Details

caprin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107195, Mouse)

Protein Percentage 78.86%
CDS Percentage 83.99%
Ka/Ks Ratio 0.34632 (Ka = 0.1286, Ks = 0.3713)

Caprin2 ENSRNOG00000047319 (Rat)

Gene Details

caprin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064956, Rat)

Protein Percentage 77.47%
CDS Percentage 81.33%
Ka/Ks Ratio 0.31207 (Ka = 0.1484, Ks = 0.4755)

Genome Location

Sequence Coding sequence

Length: 3192 bp    Location: 5027184..5080741   Strand: +
>XM_004855052.1
ATGGTGCAACTCTCTTCGTCCCCTTTTGGTTACCAGTCACCTGCAGGCCGGTTAGAGGAGGAAAGAGTGGGGAATATGAAGTCAGCCAAGCCCCAGGTGAACCACAGTCAACATGGGGAAAGCCAGCGGGCTCTGAGCCCCCTGCAGTGTGCTCTCGGTTATGCTGCGTCTCCAACCCAGGCCTATGAGACCTACATCGACAACGGACTCATATGCCTTAAACACAAAATTAGAAACATCGAGAAAAAGAAGCTCAAACTGGAAGATTACAAAGATCGTCTGAAAAATGGAGAACAACTTAATTCAGATCAGCTGGAAGCAGTAGAGAAGTATGAAGAGGTGCTACATAATTTGGAATTTGCCAAGGAGCTTCAGAAAACCTTTTCTGGACTGAGCCAAGACCTACTGAAAGCGCAGAAAAAGGCCCAGAGAAGGGAGCACATAATAAAACTTGAGGCTGAGAAGAAAAAGCTTCGAACTATACTTCAAGTTCAGTATGTATTACAGAACTTGACACAGGAACATGTACAAAAAGACTTCAAAGGGGGCTTGAATGGTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACCTCATTAAATTTTCAAAACTGACCTGCCCTGAAAGAAATGAAAGTCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAAGTAGTGAGAAAGCAGTGGTAGGAACGACATACAAGCACTTGAAAGATCTGCTGTCTAAACTACTGAACTCAGGTTATTTTGAGAGTATCCCAGTTCCCAAAACTGCTAAGGAAAAAGAAGTGTCCTTGGAAGAAGAAATGCTAATGCAATCAGAGAAGAAAAAACAATTAGTGAAGACTGAATCTATCAAAGAGTCAGAGACTCTTATGGAACTTGCACAACCAGAGATACAACCCCAGGAGTTTCTTAATAGACGCTATATGACAGAAGTAGATCATTCAAACAAACAAGACAAAGAGCAGACTTGGGAAGCAGATTATGCTAAGAAACCAAATCTCCCCAAATGTTGGGATATGCTCAGTGAATCAAATGGTCAAGAGAAGAAACAGGAATCTTTCAAGTCCTGGGAGTCTCCAGTTAAGCAGCAGGAGGTATCAAATCTTGACATTTCCTTAGAACAGAGGAAACAAGAGATTCCAAAACTCAGGTCAACCCTGCAGGAGGACAAGCAGCAGGAGATCTCCAAACCCAAGCCACTTCCCAGCCAGTGGAAGCAGGACACTCTTAAGTCCAAAGAGGAGCAGAAGAAGCTGGAGACACCAAAGTCTTGGTCAGCTCAGCTGCAGAAAGAAAAGGATCCAAAGAAGCCCATGCCAAAGTCCTGGACACCTGTGCAGAGTGAACAGAATGTCACCAAGTCGTGGCCCACTCCAGTGTGTAATAGTCAGGATTCTAAGCTGCCAGCGACTTCAGAATCCTGGGACCACAGTGCTGAGAGTCAGAAATGCTCCTTAGTGCCACAGTCTCAGATTTCTCCAAAGTCCTGGGGAGTAGCCACAGCAAGCCTCATTCCAGATGAGCAGCTGCTGCCTAGGAAGCTCAACACAGAGCCCACAGATGTGCCTAAGCCCGTGCCTCAGCCTCTAGGTTCTTCCTCTGTCCTTCCAAAGGATCCAGTACTAAGGAAAGAAAAACTGCAGGATCTGATGACCCAGATTCAAGGAACTTGTAATTTTATGCAAGAATCTGTTCTGGATTTTGACAAACCTTCAAGTGCAATTTCATCATCACAGCCGCCTTCAGCTTCTTCAAGTAGCCCAGTAGTTTCTGCCTTATCTACAGAGCAAAATATGACCAGTCAATGTGATTTTCTTCAAGAGCCATTACAGGCTGCTTCTCCAGTTACTTGTAGCCCAAATGCTTGCTTGGTTTCTACTGATCAGGCTTCTTCGGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGCATCAGTTCCCTCAAGTAAGCCACCATCTTCACTAGCTTCTCCAAATCCTCCCACGTCAAAGGGCTCTGAACAGTCGCCTCCAGCAAGCAGTAGTTCAATAACCATTAACACAGCACCCTTTCAAGCCATGCAGACAGTATTTAATGTTAATGCACCGCTGCCTCCACGGAAAGAACAAGAAATAAGGGAATCCACTTATCCACCTGGCTACAATCAGAGTTTTACTACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCAGCTATACATGTAGAACAAACTGTTCTGTCTCAAGAGACTGCTGCAAGTTACTATCCTGATGGAACTATTCAAGTAGGCAATGGTAGCCTTGCCTTATACCCAGCACAGACGAATGTATTTCCCAGACCCACACAGCCATTTGTCAGCAGCCGGGGATCTGTGAGAGGATGTGCTCGTGGTGGGAGATTACTTGCCAATTCCTATCGATCCACTGGCAGTTATAAAGGTTTTGATACTTACAGAGGACCTCCTTCCATTTCCAATGGAAATTATAGCCAGCTGCAGTTCCAAGCTAGAGAATACCCTGGAGTACCTTATTCCCAAAGGGATAATTTCCAGCAGTGCTATAAGCGAGGAGGGACACTTGGCGGTCCTCGGGCAAATTCAAGAGCAGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACAACGAAACCTTCAACAGTGGTGACTCTGGCCAGGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAACCCTGCAGCCACCCTACTGCCAGTCCACGTCTATCCCCTGCCTCAGCAAATGCGTGTTGCCTTCTCAGCAGCCAGAACCTCGAACTTGGCCCCTGGAGGCTTAGACCAACCCATTGTGTTTGATCTTCTTCTGAACAACTTGGGAGAGACGTTTGATCTTCATGTTGGTAGATTCAGTTGCCCGGTGAATGGCACTTATGTTTTTATTTTCCACATGCTAAAGCTGGCAGTGAATGTGCCACTCTACGTCAACCTCATGAAGAATGAGGAGGTCTTGGTGTCAGCCTATGCCAATGATGGTGCTCCAGACCATGAAACTGCTAGTAATCATGCAGTTCTTCAGCTCTTCCAGGGAGACCAGATATGGTTACGTCTGCACAGGGGAGCAATTTATGGGAGCAGTTGGAAATATTCTACATTTTCAGGTTATCTTCTTTATCAAGATTGA

Related Sequences

XP_004855109.1 Protein

Caprin2 PREDICTED: caprin-2 isoform X1 [Heterocephalus glaber]

Length: 1063 aa      View alignments
>XP_004855109.1
MVQLSSSPFGYQSPAGRLEEERVGNMKSAKPQVNHSQHGESQRALSPLQCALGYAASPTQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNSDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHIIKLEAEKKKLRTILQVQYVLQNLTQEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLESSEKAVVGTTYKHLKDLLSKLLNSGYFESIPVPKTAKEKEVSLEEEMLMQSEKKKQLVKTESIKESETLMELAQPEIQPQEFLNRRYMTEVDHSNKQDKEQTWEADYAKKPNLPKCWDMLSESNGQEKKQESFKSWESPVKQQEVSNLDISLEQRKQEIPKLRSTLQEDKQQEISKPKPLPSQWKQDTLKSKEEQKKLETPKSWSAQLQKEKDPKKPMPKSWTPVQSEQNVTKSWPTPVCNSQDSKLPATSESWDHSAESQKCSLVPQSQISPKSWGVATASLIPDEQLLPRKLNTEPTDVPKPVPQPLGSSSVLPKDPVLRKEKLQDLMTQIQGTCNFMQESVLDFDKPSSAISSSQPPSASSSSPVVSALSTEQNMTSQCDFLQEPLQAASPVTCSPNACLVSTDQASSGSETEFMTSETPEASVPSSKPPSSLASPNPPTSKGSEQSPPASSSSITINTAPFQAMQTVFNVNAPLPPRKEQEIRESTYPPGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYYPDGTIQVGNGSLALYPAQTNVFPRPTQPFVSSRGSVRGCARGGRLLANSYRSTGSYKGFDTYRGPPSISNGNYSQLQFQAREYPGVPYSQRDNFQQCYKRGGTLGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPVTNPAATLLPVHVYPLPQQMRVAFSAARTSNLAPGGLDQPIVFDLLLNNLGETFDLHVGRFSCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD