Sequence details NCBI ID: XM_004855022.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bicd1
Gene Name bicaudal D homolog 1 (Drosophila), transcript variant X2
Entrez Gene ID 101713727

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BICD1 ENSCPOG00000001551 (Guinea pig)

Gene Details

bicaudal D homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001403, Guinea pig)

Protein Percentage 96.2%
CDS Percentage 93.29%
Ka/Ks Ratio 0.05945 (Ka = 0.0173, Ks = 0.2909)

BICD1 ENSG00000151746 (Human)

Gene Details

bicaudal D homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000281474, Human)

Protein Percentage 93.42%
CDS Percentage 87.5%
Ka/Ks Ratio 0.04916 (Ka = 0.0318, Ks = 0.6468)

Bicd1 ENSMUSG00000003452 (Mouse)

Gene Details

bicaudal D homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084039, Mouse)

Protein Percentage 91.48%
CDS Percentage 82.75%
Ka/Ks Ratio 0.03951 (Ka = 0.0465, Ks = 1.1756)

Bicd1 ENSRNOG00000036911 (Rat)

Gene Details

bicaudal D homolog 1 (Drosophila) (Bicd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052303, Rat)

Protein Percentage 91.48%
CDS Percentage 83.03%
Ka/Ks Ratio 0.03998 (Ka = 0.0465, Ks = 1.1632)

Genome Location

Sequence Coding sequence

Length: 2928 bp    Location: 3986663..3762282   Strand: -
Raw sequence   
>XM_004855022.1
ATGGCCGCAGAGGAGCTGCTGCAGAGCGTGGATCACTACAAGACGGAGATCGAGCGGCTGACCCGCGAGCTCACCGAGACCACCCACGAGAAGATCCAGGCTGCCGAGTACGGGCTGGTGGTGCTGGAGGAGAAGCTGACTCTCAAGCAGCAGTATGAAGAGCTGGAGGCCGAGTACGACAGCCTCAAGCAGGAGCTGGAGCAGCTCCGCGAGGCATTCGGGCAGTCCTACTCTATCCACCGCAAAGTTGCCGAGGATGGAGAGACTCGGGAGGAAACACTTCTACAGGAATCGGCGTCGAAGGAAGCTTACTACCTGGGCAAGATCTTGGAAATGCAGAACGAACTGAAACAGAGCCGGGCTGTGGTCACTAACATCCAGGCAGAAAATGAGAGGCTCACGGCTGTCGTTCAGGACCTGAAGGAGAGCAATGAGATGGTGGAGCTGCAGAGGATACGGATGAAGGATGAGATCAGAGAGTACAAGTTCCGGGAAGCCCGGCTCCTCCAGGACTACACGGAGCTGGAAGAGGAGAACATCACACTGCAGAAACTCGTGTCTACATTGAAACAGAACCAGGTGGAGTACGAGGGCCTGAAGCACGAGATCAAGCGCTGCGAGGAGGAGGCGGTGCTGCTCAACAGCCAGCTGGAGGATGCACTGCGGCTCAAGGAGATCGCGGCGCACCAGCTGGAGGAGGCGCTGGAGACACTCAAGAACGAGCGCGAGCAGAAGAACAGCCTGCGCAAGGAGCTGGCCCAGTATGTCACCCTTGGAGACAGCCACCTGGGCCTCTCCATGGACGGTCTCAAATTCACTGAGGACGGTGCGGAGCCCAACAACGACGACAAGATGAACGGGCACGGGCCCCTGGCGAGGCTGAATGGGGACTACCGGGCGCCCGCGCTGCGGAAGGGCGAGGCCCTGCATCCTGTCTCCGACCTGTTCAGCGAGCTGAACATCTCGGAGATCCAGAAGCTGAAGCAGCAGCTGATGCAGGTGGAGCGGGAGAAGGCCATCCTGCTGGCCAATCTGCAGGAGTCGCAGACACAGCTGGAGCACACGAAAGGGGCGCTGACAGAGCAGCACGAGCGGGTGCACCAGCTCACAGAGCACGTCAATGCCATGCGGGGCCTGCAGAGCAGCAAAGAGCTCCGGGCTGAGCTGGACGGGGAGAAAGGCCGGGACTCCGGGGAGGAGGCCAATGACTACGAGGTGGACATCAACGGCCTAGAGATCCTGGAGTGCAAATACAGGGTGGCCGTCACAGAGGTGATCGACTTGAAAGCAGAAATTAAGGCCTTAAAGGAGAAATACAATAAATCTGTAGAAAACTATACCGAAGAGAAGGCCAAATATGAGAGTAAAATCCAGATGTATGACGAGCAGGTGACAAGCCTTGAGAAGACCACCAAGGAAGGTGTCGAGAAGATGGCCCACGTGGAGAAGGAGTTGCACAAGATGACCAGCATTGCCAACGAGAACCACAACACCCTCAACACAGCCCAAGATGAGCTGGTGACCTTCAGCGAGGAGCTCGCACAGCTGTACCACCACGTGTGTCTGTGCAATAATGAAACACCCAACAGGGTCATGCTGGACTACTACAGGCAAAGCAGAGTCACCCGCAGTGGCAGCTTAAAGGGCCCTGATGATGCCAGGGGACTTCTGTCTCCACGACTAGCCAGGCGGGGTGTGTCATCGCCAGTGGAAACAAGGCCCTCATCTGAACCTTCTGAAGTTTCAAAAGAAAACCCAGAGGCCAGCAAAGAACCAAGTCCGACGAAGACGCCCACAATCTCTCCTGTTATAACTGCCCCACCATCTTCTCCAGTGTTGGATACGAGTGATATCCGAAAAGAGCCAATGAATATCTACAACCTTAATGCCATAATCCGGGACCAAATCAAACATCTGCAGAAAGCAGTGGACCGGTCTGTGCAACTCTCTCGGCAAAGAGCAGCGGCACGGGAGTTGGCCCCCATGATCGACAAAGACAAAGAGGCTTTGATGGAGGAGATCCTCAAGCTCAAGTCGCTGCTGAGCACGAAGCGGGAGCAGATCGCCACACTGAGGGCGGTGCTGAAAGCCAACAAGCAGACAGCAGAGGTGGCCCTCGCTAATCTGAAGAACAAATACGAGAATGAGAAGGCAATGGTGACTGAGACAATGACCAAACTCCGGAACGAGCTGAAGGCTTTGAAAGAAGACGCTGCCACCTTCTCCTCCTTGAGAGCAATGTTCGCCACGAGATGTGATGAATATGTCACACAGCTGGATGAGATGCAGAGACAGTTAGCGGCTGCAGAGGACGAGAAGAAGACCCTAAACACTTTGTTACGAATGGCTATCCAGCAAAAACTCGCCCTGACTCAGCGGCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCACCAAAGGCAAACTTGGAAAGAGCAAGATCGGCAGCCCTAAAGTAAGTGGGGAGGCGTCAGCCACCGCGCCCACCATAGACACTTACCTCCTGCATAGTCAGGGCCCACAGACACCCACCATGCGGGGCAGCAGTGGCACTCAGAGGAAAAGACAATTTTCACCTTCCCTTTGTGATCAGAGCCGTCCCAGGACTTCAGGGGCCTCCTACCTACAGAGTTTATTAAGCGTTCCCCCCGACCCCACCTCCACAGAATCATTTCTTCTGAAGGGCCCCCCTTCCATGAGGGAACTCATCCAAGGGCACCGGCTCAGCAAGGAAAAAAGGTTAACCGTGGCTCCACCAGATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAACTAGCCAGGAGGCAAGACTACTCGACTGCCAGTCCTGATGCCGCCCTCCCTGAGGAGCAGCCACATTCAGGCTCCCCGTGCGCCCCGCTCCACTGTCTGGCCAAGCCGCCCTGCCCCTAG

Related Sequences

XP_004855079.1 Protein

Bicd1 PREDICTED: protein bicaudal D homolog 1 isoform X2 [Heterocephalus glaber]

Length: 975 aa      View alignments
>XP_004855079.1
MAAEELLQSVDHYKTEIERLTRELTETTHEKIQAAEYGLVVLEEKLTLKQQYEELEAEYDSLKQELEQLREAFGQSYSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNIQAENERLTAVVQDLKESNEMVELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRCEEEAVLLNSQLEDALRLKEIAAHQLEEALETLKNEREQKNSLRKELAQYVTLGDSHLGLSMDGLKFTEDGAEPNNDDKMNGHGPLARLNGDYRAPALRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHQLTEHVNAMRGLQSSKELRAELDGEKGRDSGEEANDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTTKEGVEKMAHVEKELHKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDARGLLSPRLARRGVSSPVETRPSSEPSEVSKENPEASKEPSPTKTPTISPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSVQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRTKGKLGKSKIGSPKVSGEASATAPTIDTYLLHSQGPQTPTMRGSSGTQRKRQFSPSLCDQSRPRTSGASYLQSLLSVPPDPTSTESFLLKGPPSMRELIQGHRLSKEKRLTVAPPDCQQPAASVPPQCSQLARRQDYSTASPDAALPEEQPHSGSPCAPLHCLAKPPCP