Sequence details NCBI ID: XM_004855005.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Abcd2
Gene Name ATP-binding cassette, sub-family D (ALD), member 2, transcript variant X1
Entrez Gene ID 101706287

Database interlinks

Part of NW_004624778.1 (Scaffold)

For more information consult the page for NW_004624778.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCD2 ENSCPOG00000010205 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009166, Guinea pig)

Protein Percentage 95.14%
CDS Percentage 93.75%
Ka/Ks Ratio 0.1439 (Ka = 0.0273, Ks = 0.1898)

ABCD2 ENSG00000173208 (Human)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000310688, Human)

Protein Percentage 94.18%
CDS Percentage 92.02%
Ka/Ks Ratio 0.10751 (Ka = 0.0297, Ks = 0.2762)

Abcd2 ENSMUSG00000055782 (Mouse)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068940, Mouse)

Protein Percentage 92.43%
CDS Percentage 87.12%
Ka/Ks Ratio 0.07428 (Ka = 0.0404, Ks = 0.5445)

Abcd2 ENSRNOG00000015538 (Rat)

Gene Details

ATP-binding cassette, subfamily D (ALD), member 2 (Abcd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021064, Rat)

Protein Percentage 91.89%
CDS Percentage 86.58%
Ka/Ks Ratio 0.07566 (Ka = 0.0429, Ks = 0.5664)

Genome Location

Sequence Coding sequence

Length: 2226 bp    Location: 853980..909732   Strand: +
Raw sequence   
>XM_004855005.1
ATGATACATATGCTAAATGCAGCCTCTGATCGAGTGAAATGGACCAGATCCGGTGCTGCTAAGAGGGCTGCCTGTCTGGTGGCTGCGGCATATGCCCTGAAAACCCTCTATCCCATCCTTGGCAAGCGCTTGAAGCAATCTGGGCAAGGAAAGAAAAAAGAAGCTTGCCGGGCTGCAGAGAACAGAGGAATACTGCATTGCACCGAGACCGTTTGTAAAAAACCTTCTCCTGGAGTGAATGCAGATTTTTTCAAACAGCTGCTAGAACTTCGGAAAATTCTCTTTCCAAAACTTGTGACCACTGAAACAGGGTGGCTGTGCCTCCACTCGGTGGCTCTAATCTCAAGGACCTTTCTGTCTATCTACGTGGCAGGTCTGGATGGGAAAATTGTGAAAAGCATTGTGGAAAAGAGGCCTCGGACGTTCATCTTCAAAATAGTAAAGTGGCTTATGATTGCTATTCCTGCTACCTTTGTCAACAGTGCAATAAGGTACCTGGAGTGCAAGTTGGCTTTGGCCTTCAGAACTCGCCTCGTAGACTACGCTTATGAAACCTATTTCACAAATCAGACTTATTATAAGGTGATCAACATGGATGGGAGGCTGGCAAACCCTGACCAGTCACTTACTGAGGACATTATGATGTTCTCCCAGTCTGTGGCTCATTTATATTCCAATCTGACCAAACCTATTTTAGATGTAATTCTGACCTCCTATACACTCATCCAGACTGCTACATCCAGAGGTGCAAGCCCAGCTGGGCCTACCCTGTTAGCAGGGCTTGTGATATATGCTACTGCTAAAGTGTTGAAAGCCTGCTCTCCCAAATTTGGTAAATTGGTGGCGGAAGAAGCTCATAGAAAAGGCTATTTGCGATACATACACTCCAGAATTATAGCCAATGTGGAAGAAATTGCCTTTTACAGAGGACAGAAGATAGAAATGAAGCAACTCCAGAAAAGTTACAAAGCTTTAGCGGATCAGATGAACCTTATTTTATCCAAACGCTTGTGGTACATCATGATAGAACAGTTCTTGATGAAGTATGTTTGGAGCGGCTGTGGATTAATTATGGTGGCTATACCTATTATCACTGCAACTGGCTTTGCAGATGGTGATCTAGAGGATGGCCAGAAACAAGCTATGGTTAGTGAACGGACAGAAGCCTTTACCACTGCTCGAAATTTATTGGCCTCTGGAGCGGATGCTATTGAAAGGATCATGTCTTCATACAAAGAGATCACTGAATTAGCAGGCTATACTGCTCGAGTGTATAACATGTTTTGGGTCTTTGATGAAGTAAAAAGAGGCATTTATAAGAGAACAGCTGCCATTGAAGAGCCTGAAAACCATAGCAAGATTGGGGCTAACATAGAATTACCTCTCGGTGACACATTGGCAATCAAAGGAAAAGTTATTGATGTGGATCATGGAATTATTTGTGAAAATGTTCCCATAATTACACCAGCAGGAGAAGTGGTGGCTTCCAGGCTAAACTTCAAAGTACAAGAAGGAATGCATCTTTTGATAACTGGTCCCAATGGTTGCGGAAAAAGCTCTCTCTTCAGAATTTTAAGTGGACTGTGGCCTGTGTATGAAGGAGTCCTTTATAAACCACCTCCACAGCATATGTTCTATATTCCACAAAGGCCATATATGTCTCTTGGCAGTCTTCGGGATCAGGTCATTTATCCTGACTCAGTGGATGATATGCATGATAAAGGTTACTCAGACCAGGATTTGGAATGTATTCTACACAGTGTCCACCTGTATCACATAGTGCAAAGAGAAGGAGGATGGGATGCTATTATGGACTGGAAAGATGTTCTGTCAGGAGGCGAAAAGCAAAGAATGGGCATGGCTCGTATGTTTTATCATAAACCAAAGTATGCATTGTTAGATGAATGCACCAGTGCCGTCAGCATTGATGTTGAAGGGAAGATATTTCAGGCTGCGAAAGGGGCTGGGATGTCTTTACTGTCCATAACACACAGGCCTTCTCTTTGGAAGTACCACACTCATTTATTACAATTTGATGGTGAAGGAGGTTGGCGGTTTGAACAATTGGATACTGCTATTCGTTTAACATTGAGTGAAGAAAAACAAAAGCTAGAATCTCAACTAGCTGGAATTCCCAAAATGCAGCAGAGACTCAATGAACTATGTAAAATTTTGGGAGAAGATTCAGTGCTGAAAACAATCAGAAGTGAAGATGAGACATCCTAA

Related Sequences

XP_004855062.1 Protein

Abcd2 PREDICTED: ATP-binding cassette sub-family D member 2 isoform X1 [Heterocephalus glaber]

Length: 741 aa      View alignments
>XP_004855062.1
MIHMLNAASDRVKWTRSGAAKRAACLVAAAYALKTLYPILGKRLKQSGQGKKKEACRAAENRGILHCTETVCKKPSPGVNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKRPRTFIFKIVKWLMIAIPATFVNSAIRYLECKLALAFRTRLVDYAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPAGPTLLAGLVIYATAKVLKACSPKFGKLVAEEAHRKGYLRYIHSRIIANVEEIAFYRGQKIEMKQLQKSYKALADQMNLILSKRLWYIMIEQFLMKYVWSGCGLIMVAIPIITATGFADGDLEDGQKQAMVSERTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTAAIEEPENHSKIGANIELPLGDTLAIKGKVIDVDHGIICENVPIITPAGEVVASRLNFKVQEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYSDQDLECILHSVHLYHIVQREGGWDAIMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGMSLLSITHRPSLWKYHTHLLQFDGEGGWRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNELCKILGEDSVLKTIRSEDETS