Details from NCBI annotation

Gene Symbol Sclt1
Gene Name sodium channel and clathrin linker 1
Entrez Gene ID 101724109

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCLT1 ENSG00000151466 (Human)

Gene Details

sodium channel and clathrin linker 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000281142, Human)

Protein Percentage 80.66%
CDS Percentage 87.68%
Ka/Ks Ratio 0.42566 (Ka = 0.1094, Ks = 0.2569)

Sclt1 ENSMUSG00000059834 (Mouse)

Gene Details

sodium channel and clathrin linker 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026866, Mouse)

Protein Percentage 76.26%
CDS Percentage 82.49%
Ka/Ks Ratio 0.2549 (Ka = 0.1397, Ks = 0.5479)

Sclt1 ENSRNOG00000014139 (Rat)

Gene Details

sodium channel and clathrin linker 1 (Sclt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019256, Rat)

Protein Percentage 77.04%
CDS Percentage 83.12%
Ka/Ks Ratio 0.25651 (Ka = 0.1336, Ks = 0.5207)

Genome Location

Sequence Coding sequence

Length: 1911 bp    Location: 9911713..9735612   Strand: -
>XM_004854999.1
ATGGTAATTAAAAAAACTATCCCCAAAGGAGATGGAGATGACACATTAGTAAACTCAGAAGTTGACCAAAGCTTTTTAGCACTTCTCATTACTGAGTATGATAAACATCTGGCAGAGCTAGGTGGGCAACTGAAATATTATCAGAAACAGATGGGTGAGATGAAACTACAACTTGAAAATGTCATCAAAGAAAATGAAAGGTTGCACAGTGAGTTAAAAGATGCTGTTGAAAAGCAATTGGAGGCCCTTCCCTTTAGCTTGGAAAGAGGAAATGATACCTTTCCAGATGATGAAACAGTCAAGAACCTTAGAGAGCAACTCCAGCTAGCCAATCAAGAAAAGACTCAGGCTGTGGAACTCTGGCATAATGTTTCTCAGGAGTTGAACAGACTACAGAAACTTTACCAGGAACATATGACTGAGGCCCAGATTCATGTATTTGAAAGCCAAAAACAAAAGACTAACCAACACTTTCTGAAAACAGTAACTGAGCAAAATGCGGAAATCGAGCAACTTCGAAATCAACTTAGGCAAGCCAAGTTAGATCTGAGAGTTTCAGTAGCAAAAGGAGAAGAGTTAATAAAAGTGACTGAAGATCTGCAGGGACAAATGCAAAAGAAGGAGGAGGATATGGTGTCTGCCCAAAGAAGAGAGGATGCATCAGATAGGCGCTTACATCAGTTACAATCTAGTATAAAACAATTAGAAACAAGATTATGCATGGCAATCCAAGAAGCTGACCAATTAAGAGCAGAAAAAACACATCTGGAAAAACTAACCAGAGACCTAAAAGCAAAGTGCAATGAATTAGAAAATGAGAAATATGAGGCTATTTTAAGAGTAAGAGATAGCATGCAACTCTTAGAAGAAGCTAACCTTCAAAAAAATCAGGCTCTGCTTGAGAAGAAGCAAAGAGAAGAAGATAAAGAGAAAATGAAACAAGTATTTTCTCAGCTCATACAAGATTCTGCCATTAGAACCAGGAAAGAAATTGAAAACACCAAAAAGCAACATCAAGTACAGATTTTTCAACTAACAGAAGAACTTTCAGCTCTTCAAATGGAGTGTGATGAAAAACAAACTCAAATCGAACGATGCATTAGGGAAAAAAAAGCTGTGGAGAAAGAACTAGAAAAGACTTACCGTGAAGGCAGAGGGAATGAAAACGATTACAGAAAACTGGAAGAAATGCACCAAAGATGTCTTGTTGCTGAGCGTTCAAAGGATGATCTTGAGCTAAAACTTAAGAGAGCAGAAAATAGAATAAAACAACTTGAAATTAATTCCTCAGAAGAAATATCATGTTCCCATGAAATGATTAAGAAACTTCAAAATGTGTTGGAGTCGGAAAGAGAGAACTGTGTCTTTGTCAGTGAACAAAGGCTTAAACTTCAGCAAGAAAATGAACAGTTACACAAGGAAACTGAGCATTTAAGAGATATTGCTCTAGAGGCTGAAAGAAAAGCTAAATTAAAGATCAGTACAATGGAACATGAATTTTCAATAAAGGAACATGGGTTTGAAGTTCAATTAAGAGAGATGGAAGACAGTAATCGAAGTTCTACTATTGAACTGAGGCATCTCTTAGCAACTCAACAGAAGGCGGCCAATAGGTGGAAAGAAGAAACAAAGAAACTCACTGAAAGTGCAGAAATTAGAATCAGCAACCTAAAGAGTGAGCTGAGTCGACAAAAACGTCATACCCAGGAGCTACTCTCTCAGCTAGAAATAGCAAATGAAAAGGCAGCCGAGAATGAAAAGTTAATTCTAGAGCATCAAGAAAAAGCCAACAGACTTCAAAGGCGTCTCAGTCAGGCAGAAGAGAGAGCTGCTTCAGCTTCCCATCAGCTCAGTGTGATTACAGTACAGAGAAGAAAAGCAGCCTCCGTGATGAATCTGGAAAATATTTAA

Related Sequences

XP_004855056.1 Protein

Sclt1 PREDICTED: sodium channel and clathrin linker 1 [Heterocephalus glaber]

Length: 636 aa     
>XP_004855056.1
MVIKKTIPKGDGDDTLVNSEVDQSFLALLITEYDKHLAELGGQLKYYQKQMGEMKLQLENVIKENERLHSELKDAVEKQLEALPFSLERGNDTFPDDETVKNLREQLQLANQEKTQAVELWHNVSQELNRLQKLYQEHMTEAQIHVFESQKQKTNQHFLKTVTEQNAEIEQLRNQLRQAKLDLRVSVAKGEELIKVTEDLQGQMQKKEEDMVSAQRREDASDRRLHQLQSSIKQLETRLCMAIQEADQLRAEKTHLEKLTRDLKAKCNELENEKYEAILRVRDSMQLLEEANLQKNQALLEKKQREEDKEKMKQVFSQLIQDSAIRTRKEIENTKKQHQVQIFQLTEELSALQMECDEKQTQIERCIREKKAVEKELEKTYREGRGNENDYRKLEEMHQRCLVAERSKDDLELKLKRAENRIKQLEINSSEEISCSHEMIKKLQNVLESERENCVFVSEQRLKLQQENEQLHKETEHLRDIALEAERKAKLKISTMEHEFSIKEHGFEVQLREMEDSNRSSTIELRHLLATQQKAANRWKEETKKLTESAEIRISNLKSELSRQKRHTQELLSQLEIANEKAAENEKLILEHQEKANRLQRRLSQAEERAASASHQLSVITVQRRKAASVMNLENI